RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 SCARF1Q14162 830 aa7.6□□□□□ -1.19
BRCA2-205ENST00000533776 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
BRCA2-205ENST00000533776 MPNDQ8N594 471 aa7.6□□□□□ -1.19
BRCA2-205ENST00000533776 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
BRCA2-205ENST00000533776 ADH1CP00326 375 aa7.59□□□□□ -1.19
BRCA2-205ENST00000533776 WHAMMQ8TF30 809 aa7.59□□□□□ -1.19
BRCA2-205ENST00000533776 KDM4CQ9H3R0 1056 aa7.59□□□□□ -1.19
BRCA2-205ENST00000533776 ATP1B4Q9UN42 357 aaPredicted RBP7.59□□□□□ -1.19
BRCA2-205ENST00000533776 PROCP04070 461 aa7.58□□□□□ -1.2
BRCA2-205ENST00000533776 TIMP2P16035 220 aa7.58□□□□□ -1.2
BRCA2-205ENST00000533776 MARSP56192 900 aaKnown RBP7.58□□□□□ -1.2
BRCA2-205ENST00000533776 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
BRCA2-205ENST00000533776 BPHLQ86WA6 291 aaPredicted RBP7.58□□□□□ -1.2
BRCA2-205ENST00000533776 ARMC2Q8NEN0 867 aa7.58□□□□□ -1.2
BRCA2-205ENST00000533776 K7ELQ4 463 aaPredicted RBP7.57□□□□□ -1.2
BRCA2-205ENST00000533776 NBPF14Q5TI25 921 aa7.57□□□□□ -1.2
BRCA2-205ENST00000533776 CDK15Q96Q40 435 aa7.57□□□□□ -1.2
BRCA2-205ENST00000533776 FAM117AQ9C073 453 aa7.57□□□□□ -1.2
BRCA2-205ENST00000533776 SLURP2P0DP57 97 aa7.56□□□□□ -1.2
BRCA2-205ENST00000533776 CTDSPL2Q05D32 466 aa7.56□□□□□ -1.2
BRCA2-205ENST00000533776 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
BRCA2-205ENST00000533776 MAGEB6P1A0A0J9YX57 407 aa7.55□□□□□ -1.2
BRCA2-205ENST00000533776 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
BRCA2-205ENST00000533776 SLC24A1O60721 1099 aa7.55□□□□□ -1.2
BRCA2-205ENST00000533776 ZIC2O95409 532 aaPredicted RBP7.55□□□□□ -1.2
BRCA2-205ENST00000533776 NR3C2P08235 984 aa7.55□□□□□ -1.2
BRCA2-205ENST00000533776 SH3D19Q5HYK7 790 aa7.55□□□□□ -1.2
BRCA2-205ENST00000533776 FBXO31Q5XUX0 539 aaPredicted RBP7.55□□□□□ -1.2
BRCA2-205ENST00000533776 PROCA1Q8NCQ7 364 aaPredicted RBP7.55□□□□□ -1.2
BRCA2-205ENST00000533776 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
BRCA2-205ENST00000533776 CARD14Q9BXL6 1004 aa7.55□□□□□ -1.2
BRCA2-205ENST00000533776 COL25A1Q9BXS0 654 aaPredicted RBP7.55□□□□□ -1.2
BRCA2-205ENST00000533776 MAN1A2O60476 641 aa7.54□□□□□ -1.2
BRCA2-205ENST00000533776 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
BRCA2-205ENST00000533776 SH3RF1Q7Z6J0 888 aa7.54□□□□□ -1.2
BRCA2-205ENST00000533776 LRRN4Q8WUT4 740 aa7.54□□□□□ -1.2
BRCA2-205ENST00000533776 C1QTNF2Q9BXJ5 285 aa7.54□□□□□ -1.2
BRCA2-205ENST00000533776 ZFAND3Q9H8U3 227 aa7.54□□□□□ -1.2
BRCA2-205ENST00000533776 FSHRP23945 695 aa7.53□□□□□ -1.2
BRCA2-205ENST00000533776 NR5A1Q13285 461 aa7.53□□□□□ -1.2
BRCA2-205ENST00000533776 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
BRCA2-205ENST00000533776 DCAF5Q96JK2 942 aa7.53□□□□□ -1.2
BRCA2-205ENST00000533776 KLF16Q9BXK1 252 aaPredicted RBP7.53□□□□□ -1.2
BRCA2-205ENST00000533776 GRM5P41594 1212 aa7.52□□□□□ -1.21
BRCA2-205ENST00000533776 RNFT1Q5M7Z0 435 aa7.52□□□□□ -1.21
BRCA2-205ENST00000533776 VASH1Q7L8A9 365 aaPredicted RBP7.52□□□□□ -1.21
BRCA2-205ENST00000533776 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
BRCA2-205ENST00000533776 NR6A1Q15406 480 aa7.51□□□□□ -1.21
BRCA2-205ENST00000533776 GPKOWQ92917 476 aaPredicted RBP eCLIP7.51□□□□□ -1.21
BRCA2-205ENST00000533776 AP1G2O75843 785 aa7.5□□□□□ -1.21
BRCA2-205ENST00000533776 ERFEQ4G0M1 354 aa7.5□□□□□ -1.21
BRCA2-205ENST00000533776 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
BRCA2-205ENST00000533776 PPP2R2DQ66LE6 453 aa7.5□□□□□ -1.21
BRCA2-205ENST00000533776 TRMT44Q8IYL2 757 aaKnown RBP7.5□□□□□ -1.21
BRCA2-205ENST00000533776 MAP4K5Q9Y4K4 846 aa7.5□□□□□ -1.21
BRCA2-205ENST00000533776 NANOS1Q8WY41 292 aaKnown RBP7.49□□□□□ -1.21
BRCA2-205ENST00000533776 ARHGAP9Q9BRR9 750 aa7.49□□□□□ -1.21
BRCA2-205ENST00000533776 FKBPLQ9UIM3 349 aa7.49□□□□□ -1.21
BRCA2-205ENST00000533776 GALNT6Q8NCL4 622 aa7.48□□□□□ -1.21
BRCA2-205ENST00000533776 PDXDC2PQ6P474 469 aa7.47□□□□□ -1.21
BRCA2-205ENST00000533776 CCDC116Q8IYX3 515 aa7.47□□□□□ -1.21
BRCA2-205ENST00000533776 MEIOBQ8N635 442 aa7.47□□□□□ -1.21
BRCA2-205ENST00000533776 UPP2O95045 317 aa7.46□□□□□ -1.22
BRCA2-205ENST00000533776 USP17L8P0C7I0 530 aa7.46□□□□□ -1.22
BRCA2-205ENST00000533776 BMP2P12643 396 aa7.46□□□□□ -1.22
BRCA2-205ENST00000533776 ZBTB33Q86T24 672 aa7.46□□□□□ -1.22
BRCA2-205ENST00000533776 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
BRCA2-205ENST00000533776 EPS8L1Q8TE68 723 aa7.46□□□□□ -1.22
BRCA2-205ENST00000533776 SLC10A4Q96EP9 437 aa7.46□□□□□ -1.22
BRCA2-205ENST00000533776 HMX1Q9NP08 348 aaPredicted RBP7.45□□□□□ -1.22
BRCA2-205ENST00000533776 EMILIN1Q9Y6C2 1016 aa7.45□□□□□ -1.22
BRCA2-205ENST00000533776 ZC3H4Q9UPT8 1303 aaKnown RBP7.45□□□□□ -1.22
BRCA2-205ENST00000533776 RFC5P40937 340 aa7.44□□□□□ -1.22
BRCA2-205ENST00000533776 NEUROD2Q15784 382 aa7.44□□□□□ -1.22
BRCA2-205ENST00000533776 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
BRCA2-205ENST00000533776 PPP1R26Q5T8A7 1209 aaPredicted RBP7.43□□□□□ -1.22
BRCA2-205ENST00000533776 KCTD15Q96SI1 283 aaPredicted RBP7.43□□□□□ -1.22
BRCA2-205ENST00000533776 BAG6P46379 1132 aa7.42□□□□□ -1.22
BRCA2-205ENST00000533776 PTK2Q05397 1052 aa7.42□□□□□ -1.22
BRCA2-205ENST00000533776 LYPD4Q6UWN0 246 aa7.42□□□□□ -1.22
BRCA2-205ENST00000533776 KRTAP19-1Q8IUB9 90 aa7.42□□□□□ -1.22
BRCA2-205ENST00000533776 PCMTD1Q96MG8 357 aaPredicted RBP7.42□□□□□ -1.22
BRCA2-205ENST00000533776 OCSTAMPQ9BR26 566 aa7.42□□□□□ -1.22
BRCA2-205ENST00000533776 PGPEP1Q9NXJ5 209 aa7.42□□□□□ -1.22
BRCA2-205ENST00000533776 CDV3Q9UKY7 258 aaKnown RBP7.42□□□□□ -1.22
BRCA2-205ENST00000533776 SOS2Q07890 1332 aaPredicted RBP7.42□□□□□ -1.22
BRCA2-205ENST00000533776 CBLBQ13191 982 aa7.41□□□□□ -1.22
BRCA2-205ENST00000533776 PNMA1Q8ND90 353 aa7.41□□□□□ -1.22
BRCA2-205ENST00000533776 ADAM32Q8TC27 787 aa7.41□□□□□ -1.22
BRCA2-205ENST00000533776 TSEN34Q9BSV6 310 aaKnown RBP7.41□□□□□ -1.22
BRCA2-205ENST00000533776 PHF20L1A8MW92 1017 aa7.4□□□□□ -1.22
BRCA2-205ENST00000533776 RAB15P59190 212 aa7.4□□□□□ -1.22
BRCA2-205ENST00000533776 INTS6LQ5JSJ4 861 aaKnown RBP7.4□□□□□ -1.22
BRCA2-205ENST00000533776 IL27Q8NEV9 243 aa7.4□□□□□ -1.22
BRCA2-205ENST00000533776 CNTNAP5Q8WYK1 1306 aa7.39□□□□□ -1.23
BRCA2-205ENST00000533776 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
BRCA2-205ENST00000533776 GPSM3Q9Y4H4 160 aa7.39□□□□□ -1.23
BRCA2-205ENST00000533776 PTSQ03393 145 aa7.38□□□□□ -1.23
BRCA2-205ENST00000533776 DHX9Q08211 1270 aaKnown RBP7.38□□□□□ -1.23
BRCA2-205ENST00000533776 GOPCQ9HD26 462 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms