RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 THSD7AQ9UPZ6 1657 aa13.19□□□□□ -0.3
BEST3-207ENST00000533674 USP35Q9P2H5 1018 aa13.19□□□□□ -0.3
BEST3-207ENST00000533674 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
BEST3-207ENST00000533674 KIAA0232Q92628 1395 aa13.19□□□□□ -0.3
BEST3-207ENST00000533674 PHRF1Q9P1Y6 1649 aaKnown RBP13.18□□□□□ -0.3
BEST3-207ENST00000533674 MAP3K13O43283 966 aa13.18□□□□□ -0.3
BEST3-207ENST00000533674 EVA1CP58658 441 aa13.18□□□□□ -0.3
BEST3-207ENST00000533674 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
BEST3-207ENST00000533674 FAM196AQ6ZSG2 479 aa13.18□□□□□ -0.3
BEST3-207ENST00000533674 ATP7BP35670 1465 aa13.17□□□□□ -0.3
BEST3-207ENST00000533674 ARHGEF28Q8N1W1 1705 aaKnown RBP13.17□□□□□ -0.3
BEST3-207ENST00000533674 TRIM37O94972 964 aa13.17□□□□□ -0.3
BEST3-207ENST00000533674 ZC3H6P61129 1189 aaKnown RBP13.17□□□□□ -0.3
BEST3-207ENST00000533674 EZH2Q15910 746 aaKnown RBP13.17□□□□□ -0.3
BEST3-207ENST00000533674 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
BEST3-207ENST00000533674 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
BEST3-207ENST00000533674 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
BEST3-207ENST00000533674 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
BEST3-207ENST00000533674 SPATA31A1Q5TZJ5 1347 aa13.16□□□□□ -0.3
BEST3-207ENST00000533674 APBA3O96018 575 aa13.16□□□□□ -0.3
BEST3-207ENST00000533674 PDE3BQ13370 1112 aa13.16□□□□□ -0.3
BEST3-207ENST00000533674 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
BEST3-207ENST00000533674 DISP2A7MBM2 1401 aa13.15□□□□□ -0.3
BEST3-207ENST00000533674 SGIP1Q9BQI5 828 aa13.14□□□□□ -0.31
BEST3-207ENST00000533674 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
BEST3-207ENST00000533674 GSE1Q14687 1217 aa13.13□□□□□ -0.31
BEST3-207ENST00000533674 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
BEST3-207ENST00000533674 NBPF14Q5TI25 921 aa13.13□□□□□ -0.31
BEST3-207ENST00000533674 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
BEST3-207ENST00000533674 CDK19Q9BWU1 502 aa13.13□□□□□ -0.31
BEST3-207ENST00000533674 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
BEST3-207ENST00000533674 ACEP12821 1306 aa13.12□□□□□ -0.31
BEST3-207ENST00000533674 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
BEST3-207ENST00000533674 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
BEST3-207ENST00000533674 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
BEST3-207ENST00000533674 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
BEST3-207ENST00000533674 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
BEST3-207ENST00000533674 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
BEST3-207ENST00000533674 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
BEST3-207ENST00000533674 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
BEST3-207ENST00000533674 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
BEST3-207ENST00000533674 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
BEST3-207ENST00000533674 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
BEST3-207ENST00000533674 LARP1Q6PKG0 1096 aaKnown RBP13.09□□□□□ -0.31
BEST3-207ENST00000533674 NLRP13Q86W25 1043 aa13.09□□□□□ -0.31
BEST3-207ENST00000533674 RREB1Q92766 1687 aa13.08□□□□□ -0.31
BEST3-207ENST00000533674 NUP188Q5SRE5 1749 aa13.08□□□□□ -0.32
BEST3-207ENST00000533674 PYGBP11216 843 aa13.07□□□□□ -0.32
BEST3-207ENST00000533674 THRAP3Q9Y2W1 955 aaKnown RBP13.07□□□□□ -0.32
BEST3-207ENST00000533674 CAMTA1Q9Y6Y1 1673 aa13.07□□□□□ -0.32
BEST3-207ENST00000533674 PPIP5K1Q6PFW1 1433 aa13.06□□□□□ -0.32
BEST3-207ENST00000533674 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
BEST3-207ENST00000533674 C11orf95C9JLR9 678 aaPredicted RBP13.06□□□□□ -0.32
BEST3-207ENST00000533674 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
BEST3-207ENST00000533674 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
BEST3-207ENST00000533674 CPDO75976 1380 aa13.06□□□□□ -0.32
BEST3-207ENST00000533674 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
BEST3-207ENST00000533674 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
BEST3-207ENST00000533674 GCP02774 474 aa13.05□□□□□ -0.32
BEST3-207ENST00000533674 YY1P25490 414 aa13.05□□□□□ -0.32
BEST3-207ENST00000533674 SPON1Q9HCB6 807 aa13.05□□□□□ -0.32
BEST3-207ENST00000533674 USP19O94966 1318 aa13.05□□□□□ -0.32
BEST3-207ENST00000533674 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
BEST3-207ENST00000533674 CRB1P82279 1406 aa13.05□□□□□ -0.32
BEST3-207ENST00000533674 TIE1P35590 1138 aa13.04□□□□□ -0.32
BEST3-207ENST00000533674 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
BEST3-207ENST00000533674 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
BEST3-207ENST00000533674 OVOS2A0A0G2JMS6 1433 aa13.04□□□□□ -0.32
BEST3-207ENST00000533674 OVOS2A0A0J9YW53 1432 aa13.04□□□□□ -0.32
BEST3-207ENST00000533674 OVOS2Q6IE36 1432 aa13.04□□□□□ -0.32
BEST3-207ENST00000533674 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
BEST3-207ENST00000533674 NLRP6P59044 892 aa13.03□□□□□ -0.32
BEST3-207ENST00000533674 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
BEST3-207ENST00000533674 DDB1Q16531 1140 aa13.02□□□□□ -0.33
BEST3-207ENST00000533674 TOM1L2Q6ZVM7 507 aa13.02□□□□□ -0.33
BEST3-207ENST00000533674 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
BEST3-207ENST00000533674 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
BEST3-207ENST00000533674 BRD4O60885 1362 aaPredicted RBP13.02□□□□□ -0.33
BEST3-207ENST00000533674 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.33
BEST3-207ENST00000533674 KCNQ2O43526 872 aa13.01□□□□□ -0.33
BEST3-207ENST00000533674 LRRC37A3O60309 1634 aa13□□□□□ -0.33
BEST3-207ENST00000533674 CHRM1P11229 460 aaPredicted RBP13□□□□□ -0.33
BEST3-207ENST00000533674 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
BEST3-207ENST00000533674 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
BEST3-207ENST00000533674 CSB-PGBD3P0DP91 1061 aa12.99□□□□□ -0.33
BEST3-207ENST00000533674 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
BEST3-207ENST00000533674 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
BEST3-207ENST00000533674 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
BEST3-207ENST00000533674 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
BEST3-207ENST00000533674 USP6P35125 1406 aa12.98□□□□□ -0.33
BEST3-207ENST00000533674 AATKQ6ZMQ8 1374 aa12.98□□□□□ -0.33
BEST3-207ENST00000533674 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
BEST3-207ENST00000533674 SOX12O15370 315 aa12.98□□□□□ -0.33
BEST3-207ENST00000533674 ATN1P54259 1190 aaPredicted RBP12.98□□□□□ -0.33
BEST3-207ENST00000533674 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
BEST3-207ENST00000533674 LHX8Q68G74 356 aa12.97□□□□□ -0.33
BEST3-207ENST00000533674 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
BEST3-207ENST00000533674 SLIT3O75094 1523 aa12.97□□□□□ -0.33
BEST3-207ENST00000533674 WNK3Q9BYP7 1800 aa12.97□□□□□ -0.33
BEST3-207ENST00000533674 PEAK1Q9H792 1746 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms