RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 SLIT3O75094 1523 aa15.51■□□□□ 0.07
CTNND1-235ENST00000533189 CENPJQ9HC77 1338 aaPredicted RBP15.5■□□□□ 0.07
CTNND1-235ENST00000533189 STK32BQ9NY57 414 aa15.5■□□□□ 0.07
CTNND1-235ENST00000533189 USP6P35125 1406 aa15.5■□□□□ 0.07
CTNND1-235ENST00000533189 COL18A1P39060 1754 aa15.49■□□□□ 0.07
CTNND1-235ENST00000533189 WDR17Q8IZU2 1322 aa15.49■□□□□ 0.07
CTNND1-235ENST00000533189 CHD4Q14839 1912 aa15.49■□□□□ 0.07
CTNND1-235ENST00000533189 QRICH2Q9H0J4 1663 aa15.49■□□□□ 0.07
CTNND1-235ENST00000533189 PTF1AQ7RTS3 328 aa15.49■□□□□ 0.07
CTNND1-235ENST00000533189 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
CTNND1-235ENST00000533189 PDGFDQ9GZP0 370 aaPredicted RBP15.49■□□□□ 0.07
CTNND1-235ENST00000533189 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
CTNND1-235ENST00000533189 PTGER2P43116 358 aa15.48■□□□□ 0.07
CTNND1-235ENST00000533189 NBPF1Q3BBV0 1214 aa15.48■□□□□ 0.07
CTNND1-235ENST00000533189 PROM2Q8N271 834 aa15.48■□□□□ 0.07
CTNND1-235ENST00000533189 ZNF784Q8NCA9 323 aaPredicted RBP15.48■□□□□ 0.07
CTNND1-235ENST00000533189 CABP1Q9NZU7 370 aa15.48■□□□□ 0.07
CTNND1-235ENST00000533189 RGPD5Q99666 1765 aa15.48■□□□□ 0.07
CTNND1-235ENST00000533189 BCL9O00512 1426 aa15.48■□□□□ 0.07
CTNND1-235ENST00000533189 PIK3C2AO00443 1686 aa15.48■□□□□ 0.07
CTNND1-235ENST00000533189 CSB-PGBD3P0DP91 1061 aa15.47■□□□□ 0.07
CTNND1-235ENST00000533189 TXNRD1Q16881 649 aa15.47■□□□□ 0.07
CTNND1-235ENST00000533189 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
CTNND1-235ENST00000533189 UTRNP46939 3433 aa15.46■□□□□ 0.07
CTNND1-235ENST00000533189 SLC15A2Q16348 729 aa15.46■□□□□ 0.07
CTNND1-235ENST00000533189 EXOC5O00471 708 aa15.45■□□□□ 0.06
CTNND1-235ENST00000533189 SYT17Q9BSW7 474 aa15.45■□□□□ 0.06
CTNND1-235ENST00000533189 CARD10Q9BWT7 1032 aa15.45■□□□□ 0.06
CTNND1-235ENST00000533189 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
CTNND1-235ENST00000533189 MTFR1LQ9H019 292 aa15.45■□□□□ 0.06
CTNND1-235ENST00000533189 AXIN2Q9Y2T1 843 aa15.45■□□□□ 0.06
CTNND1-235ENST00000533189 KCNH5Q8NCM2 988 aa15.44■□□□□ 0.06
CTNND1-235ENST00000533189 ARHGEF25Q86VW2 580 aa15.43■□□□□ 0.06
CTNND1-235ENST00000533189 KAT6BQ8WYB5 2073 aa15.43■□□□□ 0.06
CTNND1-235ENST00000533189 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
CTNND1-235ENST00000533189 SOX12O15370 315 aa15.42■□□□□ 0.06
CTNND1-235ENST00000533189 NHSQ6T4R5 1651 aa15.41■□□□□ 0.06
CTNND1-235ENST00000533189 CCDC7Q96M83 1385 aa15.41■□□□□ 0.06
CTNND1-235ENST00000533189 TNS2Q63HR2 1409 aa15.41■□□□□ 0.06
CTNND1-235ENST00000533189 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
CTNND1-235ENST00000533189 TRPM1Q7Z4N2 1603 aa15.4■□□□□ 0.06
CTNND1-235ENST00000533189 ZNF692Q9BU19 519 aaPredicted RBP15.4■□□□□ 0.06
CTNND1-235ENST00000533189 TTC21BQ7Z4L5 1316 aa15.4■□□□□ 0.06
CTNND1-235ENST00000533189 ARXQ96QS3 562 aa15.39■□□□□ 0.05
CTNND1-235ENST00000533189 C1QTNF8P60827 252 aa15.38■□□□□ 0.05
CTNND1-235ENST00000533189 ACSBG1Q96GR2 724 aa15.38■□□□□ 0.05
CTNND1-235ENST00000533189 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
CTNND1-235ENST00000533189 TTC21AQ8NDW8 1320 aa15.38■□□□□ 0.05
CTNND1-235ENST00000533189 ABCC6O95255 1503 aa15.38■□□□□ 0.05
CTNND1-235ENST00000533189 BTAF1O14981 1849 aa15.37■□□□□ 0.05
CTNND1-235ENST00000533189 NFAT5O94916 1531 aa15.37■□□□□ 0.05
CTNND1-235ENST00000533189 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
CTNND1-235ENST00000533189 PAPPAQ13219 1627 aa15.35■□□□□ 0.05
CTNND1-235ENST00000533189 GPR162Q16538 588 aa15.35■□□□□ 0.05
CTNND1-235ENST00000533189 NLRP2Q9NX02 1062 aa15.34■□□□□ 0.05
CTNND1-235ENST00000533189 KTN1Q86UP2 1357 aaKnown RBP15.34■□□□□ 0.05
CTNND1-235ENST00000533189 LTN1O94822 1766 aa15.32■□□□□ 0.04
CTNND1-235ENST00000533189 IL2RBP14784 551 aa15.32■□□□□ 0.04
CTNND1-235ENST00000533189 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
CTNND1-235ENST00000533189 MON2Q7Z3U7 1717 aa15.31■□□□□ 0.04
CTNND1-235ENST00000533189 POLD1P28340 1107 aa15.31■□□□□ 0.04
CTNND1-235ENST00000533189 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
CTNND1-235ENST00000533189 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
CTNND1-235ENST00000533189 ERBB3P21860 1342 aa15.31■□□□□ 0.04
CTNND1-235ENST00000533189 QSER1Q2KHR3 1735 aa15.31■□□□□ 0.04
CTNND1-235ENST00000533189 GIGYF1O75420 1035 aaPredicted RBP15.3■□□□□ 0.04
CTNND1-235ENST00000533189 SLC16A10Q8TF71 515 aa15.3■□□□□ 0.04
CTNND1-235ENST00000533189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.042e-8■□□□□ 11.3
CTNND1-235ENST00000533189 LRRC4BQ9NT99 713 aa15.29■□□□□ 0.04
CTNND1-235ENST00000533189 USP54Q70EL1 1684 aa15.28■□□□□ 0.04
CTNND1-235ENST00000533189 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
CTNND1-235ENST00000533189 ANKRD24Q8TF21 1146 aa15.28■□□□□ 0.04
CTNND1-235ENST00000533189 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
CTNND1-235ENST00000533189 GOLGB1Q14789 3259 aaKnown RBP15.28■□□□□ 0.04
CTNND1-235ENST00000533189 USP31Q70CQ4 1352 aa15.27■□□□□ 0.04
CTNND1-235ENST00000533189 SLC27A3Q5K4L6 730 aa15.27■□□□□ 0.04
CTNND1-235ENST00000533189 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
CTNND1-235ENST00000533189 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
CTNND1-235ENST00000533189 TUBGCP6Q96RT7 1819 aa15.26■□□□□ 0.03
CTNND1-235ENST00000533189 NME9Q86XW9 330 aa15.25■□□□□ 0.03
CTNND1-235ENST00000533189 TFCP2L1Q9NZI6 479 aa15.25■□□□□ 0.03
CTNND1-235ENST00000533189 CEP350Q5VT06 3117 aa15.24■□□□□ 0.03
CTNND1-235ENST00000533189 PNPLA7Q6ZV29 1317 aa15.24■□□□□ 0.03
CTNND1-235ENST00000533189 DDX54Q8TDD1 881 aaKnown RBP15.24■□□□□ 0.03
CTNND1-235ENST00000533189 FAM208AQ9UK61 1670 aaKnown RBP15.24■□□□□ 0.03
CTNND1-235ENST00000533189 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
CTNND1-235ENST00000533189 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
CTNND1-235ENST00000533189 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
CTNND1-235ENST00000533189 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
CTNND1-235ENST00000533189 NLGN2Q8NFZ4 835 aa15.22■□□□□ 0.03
CTNND1-235ENST00000533189 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
CTNND1-235ENST00000533189 SBNO2Q9Y2G9 1366 aa15.22■□□□□ 0.03
CTNND1-235ENST00000533189 LY75O60449 1722 aa15.21■□□□□ 0.03
CTNND1-235ENST00000533189 DOT1LQ8TEK3 1739 aa15.21■□□□□ 0.03
CTNND1-235ENST00000533189 GRIN3BO60391 1043 aa15.21■□□□□ 0.03
CTNND1-235ENST00000533189 EDC4Q6P2E9 1401 aaKnown RBP15.2■□□□□ 0.02
CTNND1-235ENST00000533189 MSH5O43196 834 aa15.2■□□□□ 0.02
CTNND1-235ENST00000533189 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
CTNND1-235ENST00000533189 KCNQ4P56696 695 aa15.2■□□□□ 0.02
CTNND1-235ENST00000533189 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms