RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
SOX9-AS1-210ENST00000533039 ABCC6O95255 1503 aa12.34□□□□□ -0.43
SOX9-AS1-210ENST00000533039 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
SOX9-AS1-210ENST00000533039 SOX12O15370 315 aa12.34□□□□□ -0.43
SOX9-AS1-210ENST00000533039 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
SOX9-AS1-210ENST00000533039 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
SOX9-AS1-210ENST00000533039 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
SOX9-AS1-210ENST00000533039 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
SOX9-AS1-210ENST00000533039 NFAT5O94916 1531 aa12.33□□□□□ -0.44
SOX9-AS1-210ENST00000533039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.33□□□□□ -0.44
SOX9-AS1-210ENST00000533039 WDR17Q8IZU2 1322 aa12.33□□□□□ -0.44
SOX9-AS1-210ENST00000533039 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
SOX9-AS1-210ENST00000533039 LRRC37A3O60309 1634 aa12.33□□□□□ -0.44
SOX9-AS1-210ENST00000533039 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
SOX9-AS1-210ENST00000533039 EDC4Q6P2E9 1401 aaKnown RBP12.32□□□□□ -0.44
SOX9-AS1-210ENST00000533039 TRIM37O94972 964 aa12.32□□□□□ -0.44
SOX9-AS1-210ENST00000533039 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
SOX9-AS1-210ENST00000533039 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
SOX9-AS1-210ENST00000533039 NINLQ9Y2I6 1382 aa12.31□□□□□ -0.44
SOX9-AS1-210ENST00000533039 ST20-MTHFSA0A0A6YYL1 179 aa12.31□□□□□ -0.44
SOX9-AS1-210ENST00000533039 C11orf95C9JLR9 678 aaPredicted RBP12.31□□□□□ -0.44
SOX9-AS1-210ENST00000533039 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
SOX9-AS1-210ENST00000533039 EN1Q05925 392 aaPredicted RBP12.31□□□□□ -0.44
SOX9-AS1-210ENST00000533039 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
SOX9-AS1-210ENST00000533039 RREB1Q92766 1687 aa12.3□□□□□ -0.44
SOX9-AS1-210ENST00000533039 NME9Q86XW9 330 aa12.3□□□□□ -0.44
SOX9-AS1-210ENST00000533039 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
SOX9-AS1-210ENST00000533039 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
SOX9-AS1-210ENST00000533039 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
SOX9-AS1-210ENST00000533039 APBA3O96018 575 aa12.29□□□□□ -0.44
SOX9-AS1-210ENST00000533039 DDB1Q16531 1140 aa12.29□□□□□ -0.44
SOX9-AS1-210ENST00000533039 TESK2Q96S53 571 aa12.29□□□□□ -0.44
SOX9-AS1-210ENST00000533039 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
SOX9-AS1-210ENST00000533039 PARD3Q8TEW0 1356 aa12.29□□□□□ -0.44
SOX9-AS1-210ENST00000533039 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
SOX9-AS1-210ENST00000533039 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 TMF1P82094 1093 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 PCGF6Q9BYE7 350 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 LRP5O75197 1615 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 USP47Q96K76 1375 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
SOX9-AS1-210ENST00000533039 EZH2Q15910 746 aaKnown RBP12.27□□□□□ -0.45
SOX9-AS1-210ENST00000533039 CARD10Q9BWT7 1032 aa12.27□□□□□ -0.45
SOX9-AS1-210ENST00000533039 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
SOX9-AS1-210ENST00000533039 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
SOX9-AS1-210ENST00000533039 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
SOX9-AS1-210ENST00000533039 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
SOX9-AS1-210ENST00000533039 CAMKK2Q96RR4 588 aa12.25□□□□□ -0.45
SOX9-AS1-210ENST00000533039 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
SOX9-AS1-210ENST00000533039 ERBB3P21860 1342 aa12.24□□□□□ -0.45
SOX9-AS1-210ENST00000533039 COG3Q96JB2 828 aa12.24□□□□□ -0.45
SOX9-AS1-210ENST00000533039 KAT6BQ8WYB5 2073 aa12.23□□□□□ -0.45
SOX9-AS1-210ENST00000533039 EXOC5O00471 708 aa12.23□□□□□ -0.45
SOX9-AS1-210ENST00000533039 R3HDM1Q15032 1099 aaKnown RBP12.23□□□□□ -0.45
SOX9-AS1-210ENST00000533039 NBPF14Q5TI25 921 aa12.23□□□□□ -0.45
SOX9-AS1-210ENST00000533039 NLRP2Q9NX02 1062 aa12.23□□□□□ -0.45
SOX9-AS1-210ENST00000533039 MYOM1P52179 1685 aa12.22□□□□□ -0.45
SOX9-AS1-210ENST00000533039 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
SOX9-AS1-210ENST00000533039 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
SOX9-AS1-210ENST00000533039 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
SOX9-AS1-210ENST00000533039 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.45
SOX9-AS1-210ENST00000533039 ANKRD24Q8TF21 1146 aa12.21□□□□□ -0.45
SOX9-AS1-210ENST00000533039 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
SOX9-AS1-210ENST00000533039 NHSQ6T4R5 1651 aa12.21□□□□□ -0.45
SOX9-AS1-210ENST00000533039 BCL9O00512 1426 aa12.2□□□□□ -0.46
SOX9-AS1-210ENST00000533039 PLSCR1O15162 318 aa12.2□□□□□ -0.46
SOX9-AS1-210ENST00000533039 IL2RBP14784 551 aa12.2□□□□□ -0.46
SOX9-AS1-210ENST00000533039 AMPHP49418 695 aa12.2□□□□□ -0.46
SOX9-AS1-210ENST00000533039 IP6K1Q92551 441 aa12.2□□□□□ -0.46
SOX9-AS1-210ENST00000533039 SRCAPQ6ZRS2 3230 aa12.19□□□□□ -0.46
SOX9-AS1-210ENST00000533039 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
SOX9-AS1-210ENST00000533039 LTV1Q96GA3 475 aaPredicted RBP12.18□□□□□ -0.46
SOX9-AS1-210ENST00000533039 BTAF1O14981 1849 aa12.18□□□□□ -0.46
SOX9-AS1-210ENST00000533039 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
SOX9-AS1-210ENST00000533039 HOXC9P31274 260 aa12.17□□□□□ -0.46
SOX9-AS1-210ENST00000533039 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
SOX9-AS1-210ENST00000533039 RTL1A6NKG5 1358 aa12.17□□□□□ -0.46
SOX9-AS1-210ENST00000533039 MAP2P11137 1827 aaKnown RBP12.16□□□□□ -0.46
SOX9-AS1-210ENST00000533039 FYB1O15117 783 aa12.16□□□□□ -0.46
SOX9-AS1-210ENST00000533039 ANKRD26Q9UPS8 1709 aa12.15□□□□□ -0.46
SOX9-AS1-210ENST00000533039 SMG6Q86US8 1419 aaKnown RBP12.15□□□□□ -0.46
SOX9-AS1-210ENST00000533039 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
SOX9-AS1-210ENST00000533039 FBLN1P23142 703 aa12.14□□□□□ -0.47
SOX9-AS1-210ENST00000533039 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
SOX9-AS1-210ENST00000533039 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
SOX9-AS1-210ENST00000533039 NSD3Q9BZ95 1437 aa12.13□□□□□ -0.47
SOX9-AS1-210ENST00000533039 EIF4G2P78344 907 aaKnown RBP eCLIP12.13□□□□□ -0.47
SOX9-AS1-210ENST00000533039 RRS1Q15050 365 aaKnown RBP12.13□□□□□ -0.47
SOX9-AS1-210ENST00000533039 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
SOX9-AS1-210ENST00000533039 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
SOX9-AS1-210ENST00000533039 KCNQ2O43526 872 aa12.12□□□□□ -0.47
SOX9-AS1-210ENST00000533039 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
SOX9-AS1-210ENST00000533039 DDX54Q8TDD1 881 aaKnown RBP12.12□□□□□ -0.47
SOX9-AS1-210ENST00000533039 POLR3GLQ9BT43 218 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms