RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 USP31Q70CQ4 1352 aa32.45■■■□□ 2.79
LTBP3-220ENST00000532661 NFAT5O94916 1531 aa32.45■■■□□ 2.78
LTBP3-220ENST00000532661 TERF2IPQ9NYB0 399 aa32.44■■■□□ 2.78
LTBP3-220ENST00000532661 A0A1W2PP64 1363 aa32.44■■■□□ 2.78
LTBP3-220ENST00000532661 WDR17Q8IZU2 1322 aa32.43■■■□□ 2.78
LTBP3-220ENST00000532661 RGPD1P0DJD0 1748 aa32.42■■■□□ 2.78
LTBP3-220ENST00000532661 EDC4Q6P2E9 1401 aaKnown RBP32.41■■■□□ 2.78
LTBP3-220ENST00000532661 USP47Q96K76 1375 aa32.38■■■□□ 2.77
LTBP3-220ENST00000532661 CSB-PGBD3P0DP91 1061 aa32.38■■■□□ 2.77
LTBP3-220ENST00000532661 TNS1Q9HBL0 1735 aaKnown RBP32.37■■■□□ 2.77
LTBP3-220ENST00000532661 EZH2Q15910 746 aaKnown RBP32.37■■■□□ 2.77
LTBP3-220ENST00000532661 DISP2A7MBM2 1401 aa32.36■■■□□ 2.77
LTBP3-220ENST00000532661 PARP4Q9UKK3 1724 aaKnown RBP32.36■■■□□ 2.77
LTBP3-220ENST00000532661 APBA3O96018 575 aa32.35■■■□□ 2.77
LTBP3-220ENST00000532661 RGPD5Q99666 1765 aa32.35■■■□□ 2.77
LTBP3-220ENST00000532661 PSDA5PKW4 1024 aaPredicted RBP32.34■■■□□ 2.77
LTBP3-220ENST00000532661 SLC24A1O60721 1099 aa32.34■■■□□ 2.77
LTBP3-220ENST00000532661 CARD10Q9BWT7 1032 aa32.34■■■□□ 2.77
LTBP3-220ENST00000532661 DDB1Q16531 1140 aa32.33■■■□□ 2.77
LTBP3-220ENST00000532661 CAMKK2Q96RR4 588 aa32.33■■■□□ 2.77
LTBP3-220ENST00000532661 USP54Q70EL1 1684 aa32.32■■■□□ 2.76
LTBP3-220ENST00000532661 NINLQ9Y2I6 1382 aa32.32■■■□□ 2.76
LTBP3-220ENST00000532661 TMF1P82094 1093 aa32.31■■■□□ 2.76
LTBP3-220ENST00000532661 TIMELESSQ9UNS1 1208 aa32.3■■■□□ 2.76
LTBP3-220ENST00000532661 OVOS2A0A0J9YW53 1432 aa32.29■■■□□ 2.76
LTBP3-220ENST00000532661 OVOS2Q6IE36 1432 aa32.29■■■□□ 2.76
LTBP3-220ENST00000532661 CLSPNQ9HAW4 1339 aa32.28■■■□□ 2.76
LTBP3-220ENST00000532661 LRRC37A3O60309 1634 aa32.28■■■□□ 2.76
LTBP3-220ENST00000532661 ABCC6O95255 1503 aa32.26■■■□□ 2.76
LTBP3-220ENST00000532661 CDCA7Q9BWT1 371 aaPredicted RBP32.26■■■□□ 2.75
LTBP3-220ENST00000532661 OVOS2A0A0G2JMS6 1433 aa32.26■■■□□ 2.75
LTBP3-220ENST00000532661 MARCH10Q8NA82 808 aaPredicted RBP32.25■■■□□ 2.75
LTBP3-220ENST00000532661 ERBB3P21860 1342 aa32.25■■■□□ 2.75
LTBP3-220ENST00000532661 ANKRD36BQ8N2N9 1353 aa32.24■■■□□ 2.75
LTBP3-220ENST00000532661 R3HDM1Q15032 1099 aaKnown RBP32.23■■■□□ 2.75
LTBP3-220ENST00000532661 NLRP2Q9NX02 1062 aa32.23■■■□□ 2.75
LTBP3-220ENST00000532661 PEAK1Q9H792 1746 aa32.23■■■□□ 2.75
LTBP3-220ENST00000532661 CCDC7Q96M83 1385 aa32.22■■■□□ 2.75
LTBP3-220ENST00000532661 ANKRD24Q8TF21 1146 aa32.22■■■□□ 2.75
LTBP3-220ENST00000532661 COG3Q96JB2 828 aa32.22■■■□□ 2.75
LTBP3-220ENST00000532661 WNK3Q9BYP7 1800 aa32.21■■■□□ 2.75
LTBP3-220ENST00000532661 FBLN1P23142 703 aa32.21■■■□□ 2.75
LTBP3-220ENST00000532661 LTN1O94822 1766 aa32.2■■■□□ 2.75
LTBP3-220ENST00000532661 C11orf95C9JLR9 678 aaPredicted RBP32.2■■■□□ 2.75
LTBP3-220ENST00000532661 PTF1AQ7RTS3 328 aa32.2■■■□□ 2.75
LTBP3-220ENST00000532661 PARD3Q8TEW0 1356 aa32.19■■■□□ 2.74
LTBP3-220ENST00000532661 EXOC5O00471 708 aa32.18■■■□□ 2.74
LTBP3-220ENST00000532661 IP6K1Q92551 441 aa32.18■■■□□ 2.74
LTBP3-220ENST00000532661 CDCA8Q53HL2 280 aa32.15■■■□□ 2.74
LTBP3-220ENST00000532661 FYB1O15117 783 aa32.14■■■□□ 2.74
LTBP3-220ENST00000532661 LTV1Q96GA3 475 aaPredicted RBP32.14■■■□□ 2.74
LTBP3-220ENST00000532661 GGNBP2Q9H3C7 697 aa32.14■■■□□ 2.74
LTBP3-220ENST00000532661 MAP3K19Q56UN5 1328 aa32.14■■■□□ 2.74
LTBP3-220ENST00000532661 CCER1Q8TC90 406 aaPredicted RBP32.13■■■□□ 2.73
LTBP3-220ENST00000532661 BCL11BQ9C0K0 894 aaPredicted RBP32.13■■■□□ 2.73
LTBP3-220ENST00000532661 IL2RBP14784 551 aa32.11■■■□□ 2.73
LTBP3-220ENST00000532661 BCL9O00512 1426 aa32.1■■■□□ 2.73
LTBP3-220ENST00000532661 TNS2Q63HR2 1409 aa32.1■■■□□ 2.73
LTBP3-220ENST00000532661 HOXC9P31274 260 aa32.1■■■□□ 2.73
LTBP3-220ENST00000532661 RREB1Q92766 1687 aa32.1■■■□□ 2.73
LTBP3-220ENST00000532661 SBF2Q86WG5 1849 aa32.1■■■□□ 2.73
LTBP3-220ENST00000532661 AMPHP49418 695 aa32.09■■■□□ 2.73
LTBP3-220ENST00000532661 NUP188Q5SRE5 1749 aa32.07■■■□□ 2.72
LTBP3-220ENST00000532661 PLSCR1O15162 318 aa32.07■■■□□ 2.72
LTBP3-220ENST00000532661 CARD14Q9BXL6 1004 aa32.07■■■□□ 2.72
LTBP3-220ENST00000532661 RRS1Q15050 365 aaKnown RBP32.06■■■□□ 2.72
LTBP3-220ENST00000532661 NBPF14Q5TI25 921 aa32.05■■■□□ 2.72
LTBP3-220ENST00000532661 LRP5O75197 1615 aa32.04■■■□□ 2.72
LTBP3-220ENST00000532661 KCNQ2O43526 872 aa32.04■■■□□ 2.72
LTBP3-220ENST00000532661 PROM2Q8N271 834 aa32.02■■■□□ 2.72
LTBP3-220ENST00000532661 ACSBG1Q96GR2 724 aa32.01■■■□□ 2.71
LTBP3-220ENST00000532661 MYOM1P52179 1685 aa32■■■□□ 2.71
LTBP3-220ENST00000532661 NSD3Q9BZ95 1437 aa31.99■■■□□ 2.71
LTBP3-220ENST00000532661 POLR3GLQ9BT43 218 aa31.98■■■□□ 2.71
LTBP3-220ENST00000532661 HSPA5P11021 654 aaKnown RBP31.97■■■□□ 2.71
LTBP3-220ENST00000532661 RTL1A6NKG5 1358 aa31.96■■■□□ 2.71
LTBP3-220ENST00000532661 ANO8Q9HCE9 1232 aaPredicted RBP31.95■■■□□ 2.71
LTBP3-220ENST00000532661 RGPD3A6NKT7 1758 aaPredicted RBP31.94■■■□□ 2.7
LTBP3-220ENST00000532661 RGPD4Q7Z3J3 1758 aa31.94■■■□□ 2.7
LTBP3-220ENST00000532661 EIF4G2P78344 907 aaKnown RBP eCLIP31.94■■■□□ 2.7
LTBP3-220ENST00000532661 NBPF6Q5VWK0 638 aa31.94■■■□□ 2.7
LTBP3-220ENST00000532661 DDX54Q8TDD1 881 aaKnown RBP31.94■■■□□ 2.7
LTBP3-220ENST00000532661 NBPF4Q96M43 638 aa31.94■■■□□ 2.7
LTBP3-220ENST00000532661 TXNRD1Q16881 649 aa31.93■■■□□ 2.7
LTBP3-220ENST00000532661 FAM208AQ9UK61 1670 aaKnown RBP31.92■■■□□ 2.7
LTBP3-220ENST00000532661 KIF20BQ96Q89 1820 aa31.92■■■□□ 2.7
LTBP3-220ENST00000532661 HSP90AB2PQ58FF8 381 aa31.92■■■□□ 2.7
LTBP3-220ENST00000532661 USHBP1Q8N6Y0 703 aa31.91■■■□□ 2.7
LTBP3-220ENST00000532661 NHSQ6T4R5 1651 aa31.89■■■□□ 2.7
LTBP3-220ENST00000532661 RGPD2P0DJD1 1756 aa31.89■■■□□ 2.7
LTBP3-220ENST00000532661 EMILIN1Q9Y6C2 1016 aa31.88■■■□□ 2.69
LTBP3-220ENST00000532661 MEGF6O75095 1541 aa31.87■■■□□ 2.69
LTBP3-220ENST00000532661 INSRP06213 1382 aa31.86■■■□□ 2.69
LTBP3-220ENST00000532661 FLT4P35916 1363 aa31.86■■■□□ 2.69
LTBP3-220ENST00000532661 ZCRB1Q8TBF4 217 aaKnown RBP31.85■■■□□ 2.69
LTBP3-220ENST00000532661 PDGFDQ9GZP0 370 aaPredicted RBP31.84■■■□□ 2.69
LTBP3-220ENST00000532661 SMG6Q86US8 1419 aaKnown RBP31.83■■■□□ 2.69
LTBP3-220ENST00000532661 CGNL1Q0VF96 1302 aa31.83■■■□□ 2.69
LTBP3-220ENST00000532661 KIF24Q5T7B8 1368 aa31.81■■■□□ 2.68
LTBP3-220ENST00000532661 PPM1GO15355 546 aaPredicted RBP31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms