RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 DISP2A7MBM2 1401 aa23.29■■□□□ 1.32
CAVIN3-204ENST00000532354 NME9Q86XW9 330 aa23.29■■□□□ 1.32
CAVIN3-204ENST00000532354 WDR17Q8IZU2 1322 aa23.29■■□□□ 1.32
CAVIN3-204ENST00000532354 TERF2IPQ9NYB0 399 aa23.28■■□□□ 1.32
CAVIN3-204ENST00000532354 NFAT5O94916 1531 aa23.28■■□□□ 1.32
CAVIN3-204ENST00000532354 TNS1Q9HBL0 1735 aaKnown RBP23.27■■□□□ 1.32
CAVIN3-204ENST00000532354 PARP4Q9UKK3 1724 aaKnown RBP23.26■■□□□ 1.31
CAVIN3-204ENST00000532354 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
CAVIN3-204ENST00000532354 APBA3O96018 575 aa23.25■■□□□ 1.31
CAVIN3-204ENST00000532354 EZH2Q15910 746 aaKnown RBP23.25■■□□□ 1.31
CAVIN3-204ENST00000532354 CAMKK2Q96RR4 588 aa23.25■■□□□ 1.31
CAVIN3-204ENST00000532354 A0A1W2PP64 1363 aa23.25■■□□□ 1.31
CAVIN3-204ENST00000532354 EDC4Q6P2E9 1401 aaKnown RBP23.25■■□□□ 1.31
CAVIN3-204ENST00000532354 CARD10Q9BWT7 1032 aa23.23■■□□□ 1.31
CAVIN3-204ENST00000532354 USP54Q70EL1 1684 aa23.22■■□□□ 1.31
CAVIN3-204ENST00000532354 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
CAVIN3-204ENST00000532354 PSDA5PKW4 1024 aaPredicted RBP23.22■■□□□ 1.31
CAVIN3-204ENST00000532354 CSB-PGBD3P0DP91 1061 aa23.22■■□□□ 1.31
CAVIN3-204ENST00000532354 DDB1Q16531 1140 aa23.22■■□□□ 1.31
CAVIN3-204ENST00000532354 C11orf95C9JLR9 678 aaPredicted RBP23.21■■□□□ 1.31
CAVIN3-204ENST00000532354 NINLQ9Y2I6 1382 aa23.21■■□□□ 1.31
CAVIN3-204ENST00000532354 CDCA7Q9BWT1 371 aaPredicted RBP23.2■■□□□ 1.3
CAVIN3-204ENST00000532354 ABCC6O95255 1503 aa23.19■■□□□ 1.3
CAVIN3-204ENST00000532354 USP47Q96K76 1375 aa23.18■■□□□ 1.3
CAVIN3-204ENST00000532354 TIMELESSQ9UNS1 1208 aa23.18■■□□□ 1.3
CAVIN3-204ENST00000532354 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
CAVIN3-204ENST00000532354 OVOS2A0A0J9YW53 1432 aa23.17■■□□□ 1.3
CAVIN3-204ENST00000532354 OVOS2Q6IE36 1432 aa23.17■■□□□ 1.3
CAVIN3-204ENST00000532354 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
CAVIN3-204ENST00000532354 LRRC37A3O60309 1634 aa23.17■■□□□ 1.3
CAVIN3-204ENST00000532354 TMF1P82094 1093 aa23.16■■□□□ 1.3
CAVIN3-204ENST00000532354 R3HDM1Q15032 1099 aaKnown RBP23.16■■□□□ 1.3
CAVIN3-204ENST00000532354 MARCH10Q8NA82 808 aaPredicted RBP23.16■■□□□ 1.3
CAVIN3-204ENST00000532354 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
CAVIN3-204ENST00000532354 PEAK1Q9H792 1746 aa23.16■■□□□ 1.3
CAVIN3-204ENST00000532354 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
CAVIN3-204ENST00000532354 ERBB3P21860 1342 aa23.15■■□□□ 1.3
CAVIN3-204ENST00000532354 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
CAVIN3-204ENST00000532354 WNK3Q9BYP7 1800 aa23.14■■□□□ 1.29
CAVIN3-204ENST00000532354 EXOC5O00471 708 aa23.13■■□□□ 1.29
CAVIN3-204ENST00000532354 NLRP2Q9NX02 1062 aa23.12■■□□□ 1.29
CAVIN3-204ENST00000532354 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
CAVIN3-204ENST00000532354 LTN1O94822 1766 aa23.12■■□□□ 1.29
CAVIN3-204ENST00000532354 ANKRD24Q8TF21 1146 aa23.11■■□□□ 1.29
CAVIN3-204ENST00000532354 BCL9O00512 1426 aa23.1■■□□□ 1.29
CAVIN3-204ENST00000532354 PTF1AQ7RTS3 328 aa23.1■■□□□ 1.29
CAVIN3-204ENST00000532354 IP6K1Q92551 441 aa23.1■■□□□ 1.29
CAVIN3-204ENST00000532354 COG3Q96JB2 828 aa23.1■■□□□ 1.29
CAVIN3-204ENST00000532354 BCL11BQ9C0K0 894 aaPredicted RBP23.1■■□□□ 1.29
CAVIN3-204ENST00000532354 LRP5O75197 1615 aa23.09■■□□□ 1.29
CAVIN3-204ENST00000532354 RREB1Q92766 1687 aa23.09■■□□□ 1.29
CAVIN3-204ENST00000532354 SBF2Q86WG5 1849 aa23.08■■□□□ 1.29
CAVIN3-204ENST00000532354 PLSCR1O15162 318 aa23.08■■□□□ 1.29
CAVIN3-204ENST00000532354 FBLN1P23142 703 aa23.07■■□□□ 1.28
CAVIN3-204ENST00000532354 CDCA8Q53HL2 280 aa23.07■■□□□ 1.28
CAVIN3-204ENST00000532354 FYB1O15117 783 aa23.06■■□□□ 1.28
CAVIN3-204ENST00000532354 NBPF14Q5TI25 921 aa23.06■■□□□ 1.28
CAVIN3-204ENST00000532354 IL2RBP14784 551 aa23.05■■□□□ 1.28
CAVIN3-204ENST00000532354 MAP3K19Q56UN5 1328 aa23.05■■□□□ 1.28
CAVIN3-204ENST00000532354 NUP188Q5SRE5 1749 aa23.05■■□□□ 1.28
CAVIN3-204ENST00000532354 TNS2Q63HR2 1409 aa23.04■■□□□ 1.28
CAVIN3-204ENST00000532354 HOXC9P31274 260 aa23.02■■□□□ 1.28
CAVIN3-204ENST00000532354 AMPHP49418 695 aa23.02■■□□□ 1.28
CAVIN3-204ENST00000532354 LTV1Q96GA3 475 aaPredicted RBP23.02■■□□□ 1.28
CAVIN3-204ENST00000532354 GGNBP2Q9H3C7 697 aa23.02■■□□□ 1.28
CAVIN3-204ENST00000532354 PROM2Q8N271 834 aa23.01■■□□□ 1.27
CAVIN3-204ENST00000532354 RGPD3A6NKT7 1758 aaPredicted RBP22.99■■□□□ 1.27
CAVIN3-204ENST00000532354 RGPD4Q7Z3J3 1758 aa22.99■■□□□ 1.27
CAVIN3-204ENST00000532354 KCNQ2O43526 872 aa22.99■■□□□ 1.27
CAVIN3-204ENST00000532354 CARD14Q9BXL6 1004 aa22.99■■□□□ 1.27
CAVIN3-204ENST00000532354 RRS1Q15050 365 aaKnown RBP22.98■■□□□ 1.27
CAVIN3-204ENST00000532354 ACSBG1Q96GR2 724 aa22.96■■□□□ 1.27
CAVIN3-204ENST00000532354 CCER1Q8TC90 406 aaPredicted RBP22.95■■□□□ 1.26
CAVIN3-204ENST00000532354 FAM208AQ9UK61 1670 aaKnown RBP22.94■■□□□ 1.26
CAVIN3-204ENST00000532354 RTL1A6NKG5 1358 aa22.94■■□□□ 1.26
CAVIN3-204ENST00000532354 TXNRD1Q16881 649 aa22.94■■□□□ 1.26
CAVIN3-204ENST00000532354 ANO8Q9HCE9 1232 aaPredicted RBP22.94■■□□□ 1.26
CAVIN3-204ENST00000532354 MYOM1P52179 1685 aa22.93■■□□□ 1.26
CAVIN3-204ENST00000532354 DDX54Q8TDD1 881 aaKnown RBP22.92■■□□□ 1.26
CAVIN3-204ENST00000532354 NSD3Q9BZ95 1437 aa22.91■■□□□ 1.26
CAVIN3-204ENST00000532354 NHSQ6T4R5 1651 aa22.91■■□□□ 1.26
CAVIN3-204ENST00000532354 NBPF6Q5VWK0 638 aa22.9■■□□□ 1.26
CAVIN3-204ENST00000532354 NBPF4Q96M43 638 aa22.9■■□□□ 1.26
CAVIN3-204ENST00000532354 KIF20BQ96Q89 1820 aa22.89■■□□□ 1.26
CAVIN3-204ENST00000532354 HSP90AB2PQ58FF8 381 aa22.89■■□□□ 1.25
CAVIN3-204ENST00000532354 RGPD2P0DJD1 1756 aa22.89■■□□□ 1.25
CAVIN3-204ENST00000532354 EIF4G2P78344 907 aaKnown RBP eCLIP22.88■■□□□ 1.25
CAVIN3-204ENST00000532354 SPON1Q9HCB6 807 aa22.88■■□□□ 1.25
CAVIN3-204ENST00000532354 INSRP06213 1382 aa22.88■■□□□ 1.25
CAVIN3-204ENST00000532354 HSPA5P11021 654 aaKnown RBP22.87■■□□□ 1.25
CAVIN3-204ENST00000532354 ZCRB1Q8TBF4 217 aaKnown RBP22.87■■□□□ 1.25
CAVIN3-204ENST00000532354 KIF24Q5T7B8 1368 aa22.87■■□□□ 1.25
CAVIN3-204ENST00000532354 USHBP1Q8N6Y0 703 aa22.86■■□□□ 1.25
CAVIN3-204ENST00000532354 MEGF6O75095 1541 aa22.86■■□□□ 1.25
CAVIN3-204ENST00000532354 POLR3GLQ9BT43 218 aa22.85■■□□□ 1.25
CAVIN3-204ENST00000532354 PDGFDQ9GZP0 370 aaPredicted RBP22.85■■□□□ 1.25
CAVIN3-204ENST00000532354 STK32BQ9NY57 414 aa22.85■■□□□ 1.25
CAVIN3-204ENST00000532354 FLT4P35916 1363 aa22.85■■□□□ 1.25
CAVIN3-204ENST00000532354 SMG6Q86US8 1419 aaKnown RBP22.84■■□□□ 1.25
CAVIN3-204ENST00000532354 SLC15A2Q16348 729 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms