RNA–Protein interactions for RNA: ENST00000531920.6

MED17-208, Transcript of mediator complex subunit 17, human

TSL 3

Gene MED17, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-208	ENST00000531920	CTDSPL2	Q05D32	466 aa		7.8	□□□□□ -1.16
MED17-208	ENST00000531920	TSC1	Q92574	1164 aa		7.8	□□□□□ -1.16
MED17-208	ENST00000531920	HLA-C	Q95604	372 aa		7.8	□□□□□ -1.16
MED17-208	ENST00000531920	ZFP42	Q96MM3	310 aa		7.8	□□□□□ -1.16
MED17-208	ENST00000531920	GDF11	O95390	407 aa		7.79	□□□□□ -1.16
MED17-208	ENST00000531920	HMX1	Q9NP08	348 aa	Predicted RBP	7.79	□□□□□ -1.16
MED17-208	ENST00000531920	PCDHGC3	Q9UN70	934 aa		7.79	□□□□□ -1.16
MED17-208	ENST00000531920	USP46	P62068	366 aa		7.78	□□□□□ -1.16
MED17-208	ENST00000531920	ADAMTS19	Q8TE59	1207 aa		7.78	□□□□□ -1.16
MED17-208	ENST00000531920	GZF1	Q9H116	711 aa	Predicted RBP	7.77	□□□□□ -1.17
MED17-208	ENST00000531920	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.76	□□□□□ -1.17
MED17-208	ENST00000531920	VAC14	Q08AM6	782 aa		7.76	□□□□□ -1.17
MED17-208	ENST00000531920	WASHC4	Q2M389	1173 aa		7.76	□□□□□ -1.17
MED17-208	ENST00000531920	LRRN4	Q8WUT4	740 aa		7.76	□□□□□ -1.17
MED17-208	ENST00000531920	TRIM34	Q9BYJ4	488 aa		7.76	□□□□□ -1.17
MED17-208	ENST00000531920	MTMR2	Q13614	643 aa		7.75	□□□□□ -1.17
MED17-208	ENST00000531920		Q3C1V9	767 aa		7.75	□□□□□ -1.17
MED17-208	ENST00000531920	HELB	Q8NG08	1087 aa	Predicted RBP	7.75	□□□□□ -1.17
MED17-208	ENST00000531920	PBXIP1	Q96AQ6	731 aa		7.75	□□□□□ -1.17
MED17-208	ENST00000531920	GPR37L1	O60883	481 aa		7.74	□□□□□ -1.17
MED17-208	ENST00000531920	TMCO4	Q5TGY1	634 aa		7.74	□□□□□ -1.17
MED17-208	ENST00000531920	USB1	Q9BQ65	265 aa	Known RBP	7.74	□□□□□ -1.17
MED17-208	ENST00000531920	CFAP99	D6REC4	459 aa		7.73	□□□□□ -1.17
MED17-208	ENST00000531920	C6orf229	H3BNL8	230 aa		7.73	□□□□□ -1.17
MED17-208	ENST00000531920	PDE4C	Q08493	712 aa		7.73	□□□□□ -1.17
MED17-208	ENST00000531920	CFAP70	Q5T0N1	1121 aa		7.73	□□□□□ -1.17
MED17-208	ENST00000531920	XP32	Q5T750	250 aa		7.73	□□□□□ -1.17
MED17-208	ENST00000531920	EPS8L1	Q8TE68	723 aa		7.73	□□□□□ -1.17
MED17-208	ENST00000531920	CCDC24	Q8N4L8	307 aa		7.72	□□□□□ -1.17
MED17-208	ENST00000531920	PPP1R12C	Q9BZL4	782 aa		7.72	□□□□□ -1.17
MED17-208	ENST00000531920	CARNS1	A5YM72	827 aa		7.71	□□□□□ -1.18
MED17-208	ENST00000531920	SYMPK	Q92797	1274 aa	Known RBP	7.71	□□□□□ -1.18
MED17-208	ENST00000531920	KRTAP4-8	Q9BYQ9	185 aa		7.71	□□□□□ -1.18
MED17-208	ENST00000531920	ADAMTS8	Q9UP79	889 aa		7.71	□□□□□ -1.18
MED17-208	ENST00000531920	WASF2	Q9Y6W5	498 aa		7.71	□□□□□ -1.18
MED17-208	ENST00000531920	SOBP	A7XYQ1	873 aa		7.7	□□□□□ -1.18
MED17-208	ENST00000531920	CSB-PGBD3	P0DP91	1061 aa		7.7	□□□□□ -1.18
MED17-208	ENST00000531920	LMOD1	P29536	600 aa	Predicted RBP	7.7	□□□□□ -1.18
MED17-208	ENST00000531920	MFAP1	P55081	439 aa	Known RBP	7.7	□□□□□ -1.18
MED17-208	ENST00000531920	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.7	□□□□□ -1.18
MED17-208	ENST00000531920	ALG2	Q9H553	416 aa		7.7	□□□□□ -1.18
MED17-208	ENST00000531920	PALM3	A6NDB9	673 aa	Predicted RBP	7.69	□□□□□ -1.18
MED17-208	ENST00000531920	SRPK2	P78362	688 aa	Known RBP	7.69	□□□□□ -1.18
MED17-208	ENST00000531920	NR6A1	Q15406	480 aa		7.69	□□□□□ -1.18
MED17-208	ENST00000531920	CDCA8	Q53HL2	280 aa		7.69	□□□□□ -1.18
MED17-208	ENST00000531920	MRPL14	Q6P1L8	145 aa	Known RBP	7.69	□□□□□ -1.18
MED17-208	ENST00000531920	RGS22	Q8NE09	1264 aa		7.69	□□□□□ -1.18
MED17-208	ENST00000531920	MTMR7	Q9Y216	660 aa		7.69	□□□□□ -1.18
MED17-208	ENST00000531920	EHBP1	Q8NDI1	1231 aa		7.68	□□□□□ -1.18
MED17-208	ENST00000531920	PRR7	Q8TB68	274 aa		7.68	□□□□□ -1.18
MED17-208	ENST00000531920	TFIP11	Q9UBB9	837 aa	Known RBP	7.68	□□□□□ -1.18
MED17-208	ENST00000531920	IGHA1	P01876	353 aa		7.67	□□□□□ -1.18
MED17-208	ENST00000531920	KRT76	Q01546	638 aa		7.67	□□□□□ -1.18
MED17-208	ENST00000531920	RNF225	M0QZC1	329 aa	Predicted RBP	7.66	□□□□□ -1.18
MED17-208	ENST00000531920	PER1	O15534	1290 aa	Predicted RBP	7.66	□□□□□ -1.18
MED17-208	ENST00000531920	PPFIA3	O75145	1194 aa		7.66	□□□□□ -1.18
MED17-208	ENST00000531920	PURB	Q96QR8	312 aa	Known RBP	7.66	□□□□□ -1.18
MED17-208	ENST00000531920	UCN2	Q96RP3	112 aa		7.66	□□□□□ -1.18
MED17-208	ENST00000531920	KLF16	Q9BXK1	252 aa	Predicted RBP	7.66	□□□□□ -1.18
MED17-208	ENST00000531920	UST	Q9Y2C2	406 aa		7.66	□□□□□ -1.18
MED17-208	ENST00000531920	BRD1	O95696	1058 aa		7.65	□□□□□ -1.18
MED17-208	ENST00000531920	SH3BP2	P78314	561 aa		7.65	□□□□□ -1.18
MED17-208	ENST00000531920	SEMA3F	Q13275	785 aa		7.65	□□□□□ -1.18
MED17-208	ENST00000531920	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.65	□□□□□ -1.18
MED17-208	ENST00000531920	MPND	Q8N594	471 aa		7.65	□□□□□ -1.18
MED17-208	ENST00000531920	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.65	□□□□□ -1.18
MED17-208	ENST00000531920	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.65	□□□□□ -1.18
MED17-208	ENST00000531920	PATL2	C9JE40	543 aa	Known RBP	7.64	□□□□□ -1.19
MED17-208	ENST00000531920	TIMP2	P16035	220 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	JUND	P17535	347 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	SOX11	P35716	441 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	KCNA1	Q09470	495 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	SCARF1	Q14162	830 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	GPAT2	Q6NUI2	795 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	TBC1D9	Q6ZT07	1266 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	RETREG3	Q86VR2	466 aa		7.63	□□□□□ -1.19
MED17-208	ENST00000531920	GPR161	Q8N6U8	529 aa	Known RBP	7.63	□□□□□ -1.19
MED17-208	ENST00000531920	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.62	□□□□□ -1.19
MED17-208	ENST00000531920	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.61	□□□□□ -1.19
MED17-208	ENST00000531920	PNMA1	Q8ND90	353 aa		7.61	□□□□□ -1.19
MED17-208	ENST00000531920	ATG7	O95352	703 aa		7.6	□□□□□ -1.19
MED17-208	ENST00000531920	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.6	□□□□□ -1.19
MED17-208	ENST00000531920	NNT	Q13423	1086 aa		7.6	□□□□□ -1.19
MED17-208	ENST00000531920	ZNF385C	Q66K41	422 aa	Predicted RBP	7.6	□□□□□ -1.19
MED17-208	ENST00000531920	ZNF428	Q96B54	188 aa		7.6	□□□□□ -1.19
MED17-208	ENST00000531920	VRTN	Q9H8Y1	702 aa		7.6	□□□□□ -1.19
MED17-208	ENST00000531920	IVNS1ABP	Q9Y6Y0	642 aa		7.6	□□□□□ -1.19
MED17-208	ENST00000531920	TMEM88B	A6NKF7	163 aa		7.59	□□□□□ -1.19
MED17-208	ENST00000531920	RBM25	P49756	843 aa	Known RBP	7.59	□□□□□ -1.19
MED17-208	ENST00000531920	FOXK2	Q01167	660 aa		7.59	□□□□□ -1.19
MED17-208	ENST00000531920	NUDT12	Q9BQG2	462 aa		7.59	□□□□□ -1.19
MED17-208	ENST00000531920	KRTAP9-2	Q9BYQ4	174 aa		7.59	□□□□□ -1.19
MED17-208	ENST00000531920	TLL2	Q9Y6L7	1015 aa		7.59	□□□□□ -1.19
MED17-208	ENST00000531920	ARHGEF15	O94989	841 aa		7.58	□□□□□ -1.2
MED17-208	ENST00000531920	CNTNAP3B	Q96NU0	1288 aa		7.58	□□□□□ -1.2
MED17-208	ENST00000531920	CNTNAP3	Q9BZ76	1288 aa		7.58	□□□□□ -1.2
MED17-208	ENST00000531920	ATP9B	O43861	1147 aa		7.57	□□□□□ -1.2
MED17-208	ENST00000531920	ADH1C	P00326	375 aa		7.57	□□□□□ -1.2
MED17-208	ENST00000531920	FBXO45	P0C2W1	286 aa		7.57	□□□□□ -1.2
MED17-208	ENST00000531920	IRS1	P35568	1242 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms