RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 NLRP6P59044 892 aa28.82■■■□□ 2.2
HIPK3-205ENST00000531504 USP6P35125 1406 aa28.81■■■□□ 2.2
HIPK3-205ENST00000531504 ZNF784Q8NCA9 323 aaPredicted RBP28.81■■■□□ 2.2
HIPK3-205ENST00000531504 STK32BQ9NY57 414 aa28.81■■■□□ 2.2
HIPK3-205ENST00000531504 COL18A1P39060 1754 aa28.8■■■□□ 2.2
HIPK3-205ENST00000531504 WDR17Q8IZU2 1322 aa28.8■■■□□ 2.2
HIPK3-205ENST00000531504 PDGFDQ9GZP0 370 aaPredicted RBP28.8■■■□□ 2.2
HIPK3-205ENST00000531504 PTGER2P43116 358 aa28.79■■■□□ 2.2
HIPK3-205ENST00000531504 QRICH2Q9H0J4 1663 aa28.79■■■□□ 2.2
HIPK3-205ENST00000531504 CHD4Q14839 1912 aa28.79■■■□□ 2.2
HIPK3-205ENST00000531504 PTF1AQ7RTS3 328 aa28.78■■■□□ 2.2
HIPK3-205ENST00000531504 PROM2Q8N271 834 aa28.78■■■□□ 2.2
HIPK3-205ENST00000531504 MARCH10Q8NA82 808 aaPredicted RBP28.78■■■□□ 2.2
HIPK3-205ENST00000531504 CENPJQ9HC77 1338 aaPredicted RBP28.77■■■□□ 2.2
HIPK3-205ENST00000531504 CABP2Q9NPB3 220 aa28.77■■■□□ 2.2
HIPK3-205ENST00000531504 ATF5Q9Y2D1 282 aaPredicted RBP28.77■■■□□ 2.2
HIPK3-205ENST00000531504 PIK3C2AO00443 1686 aa28.77■■■□□ 2.2
HIPK3-205ENST00000531504 CPSF1Q10570 1443 aaKnown RBP28.76■■■□□ 2.19
HIPK3-205ENST00000531504 TXNRD1Q16881 649 aa28.75■■■□□ 2.19
HIPK3-205ENST00000531504 SLC15A2Q16348 729 aa28.74■■■□□ 2.19
HIPK3-205ENST00000531504 FHDC1Q9C0D6 1143 aaPredicted RBP28.74■■■□□ 2.19
HIPK3-205ENST00000531504 MTFR1LQ9H019 292 aa28.74■■■□□ 2.19
HIPK3-205ENST00000531504 SYT17Q9BSW7 474 aa28.73■■■□□ 2.19
HIPK3-205ENST00000531504 CABP1Q9NZU7 370 aa28.72■■■□□ 2.19
HIPK3-205ENST00000531504 RGPD5Q99666 1765 aa28.71■■■□□ 2.19
HIPK3-205ENST00000531504 CSB-PGBD3P0DP91 1061 aa28.7■■■□□ 2.18
HIPK3-205ENST00000531504 NBPF1Q3BBV0 1214 aa28.7■■■□□ 2.18
HIPK3-205ENST00000531504 CARD10Q9BWT7 1032 aa28.7■■■□□ 2.18
HIPK3-205ENST00000531504 AXIN2Q9Y2T1 843 aa28.7■■■□□ 2.18
HIPK3-205ENST00000531504 UTRNP46939 3433 aa28.69■■■□□ 2.18
HIPK3-205ENST00000531504 KCNH5Q8NCM2 988 aa28.69■■■□□ 2.18
HIPK3-205ENST00000531504 SENP3-EIF4A1A0A087X0R7 540 aa28.68■■■□□ 2.18
HIPK3-205ENST00000531504 EXOC5O00471 708 aa28.68■■■□□ 2.18
HIPK3-205ENST00000531504 NHSQ6T4R5 1651 aa28.67■■■□□ 2.18
HIPK3-205ENST00000531504 ARHGEF25Q86VW2 580 aa28.67■■■□□ 2.18
HIPK3-205ENST00000531504 TRPM1Q7Z4N2 1603 aa28.66■■■□□ 2.18
HIPK3-205ENST00000531504 CCDC7Q96M83 1385 aa28.66■■■□□ 2.18
HIPK3-205ENST00000531504 TNS2Q63HR2 1409 aa28.66■■■□□ 2.18
HIPK3-205ENST00000531504 SGIP1Q9BQI5 828 aa28.65■■■□□ 2.18
HIPK3-205ENST00000531504 ABCC6O95255 1503 aa28.64■■■□□ 2.17
HIPK3-205ENST00000531504 C1QTNF8P60827 252 aa28.63■■■□□ 2.17
HIPK3-205ENST00000531504 MAP3K5Q99683 1374 aa28.62■■■□□ 2.17
HIPK3-205ENST00000531504 ARXQ96QS3 562 aa28.62■■■□□ 2.17
HIPK3-205ENST00000531504 ZNF692Q9BU19 519 aaPredicted RBP28.61■■■□□ 2.17
HIPK3-205ENST00000531504 EVC2Q86UK5 1308 aa28.61■■■□□ 2.17
HIPK3-205ENST00000531504 PAPPAQ13219 1627 aa28.6■■■□□ 2.17
HIPK3-205ENST00000531504 SOX12O15370 315 aa28.59■■■□□ 2.17
HIPK3-205ENST00000531504 TTC21BQ7Z4L5 1316 aa28.59■■■□□ 2.17
HIPK3-205ENST00000531504 TTC21AQ8NDW8 1320 aa28.59■■■□□ 2.17
HIPK3-205ENST00000531504 NFAT5O94916 1531 aa28.59■■■□□ 2.17
HIPK3-205ENST00000531504 BTAF1O14981 1849 aa28.55■■■□□ 2.16
HIPK3-205ENST00000531504 ACSBG1Q96GR2 724 aa28.53■■■□□ 2.16
HIPK3-205ENST00000531504 GPR162Q16538 588 aa28.52■■■□□ 2.16
HIPK3-205ENST00000531504 QSER1Q2KHR3 1735 aa28.49■■■□□ 2.15
HIPK3-205ENST00000531504 KAT6BQ8WYB5 2073 aa28.49■■■□□ 2.15
HIPK3-205ENST00000531504 GIGYF1O75420 1035 aaPredicted RBP28.48■■■□□ 2.15
HIPK3-205ENST00000531504 KTN1Q86UP2 1357 aaKnown RBP28.48■■■□□ 2.15
HIPK3-205ENST00000531504 ERBB3P21860 1342 aa28.47■■■□□ 2.15
HIPK3-205ENST00000531504 MON2Q7Z3U7 1717 aa28.47■■■□□ 2.15
HIPK3-205ENST00000531504 IL2RBP14784 551 aa28.47■■■□□ 2.15
HIPK3-205ENST00000531504 NLRP2Q9NX02 1062 aa28.47■■■□□ 2.15
HIPK3-205ENST00000531504 POLD1P28340 1107 aa28.46■■■□□ 2.15
HIPK3-205ENST00000531504 ZNF827Q17R98 1081 aa28.46■■■□□ 2.15
HIPK3-205ENST00000531504 SLC16A10Q8TF71 515 aa28.46■■■□□ 2.15
HIPK3-205ENST00000531504 USP54Q70EL1 1684 aa28.45■■■□□ 2.15
HIPK3-205ENST00000531504 LTN1O94822 1766 aa28.45■■■□□ 2.15
HIPK3-205ENST00000531504 KLHL34Q8N239 644 aa28.44■■■□□ 2.14
HIPK3-205ENST00000531504 COL24A1Q17RW2 1714 aa28.43■■■□□ 2.14
HIPK3-205ENST00000531504 SLC27A3Q5K4L6 730 aa28.41■■■□□ 2.14
HIPK3-205ENST00000531504 LRRC4BQ9NT99 713 aa28.41■■■□□ 2.14
HIPK3-205ENST00000531504 USP31Q70CQ4 1352 aa28.4■■■□□ 2.14
HIPK3-205ENST00000531504 PELP1Q8IZL8 1130 aaKnown RBP28.4■■■□□ 2.14
HIPK3-205ENST00000531504 IFFO2Q5TF58 517 aa28.39■■■□□ 2.14
HIPK3-205ENST00000531504 AKT1S1Q96B36 256 aa28.39■■■□□ 2.14
HIPK3-205ENST00000531504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.36■■■□□ 2.13
HIPK3-205ENST00000531504 ANKRD24Q8TF21 1146 aa28.36■■■□□ 2.13
HIPK3-205ENST00000531504 ROCK2O75116 1388 aaKnown RBP28.36■■■□□ 2.13
HIPK3-205ENST00000531504 SHANK3Q9BYB0 1731 aa28.35■■■□□ 2.13
HIPK3-205ENST00000531504 TUBGCP6Q96RT7 1819 aa28.35■■■□□ 2.13
HIPK3-205ENST00000531504 FAM208AQ9UK61 1670 aaKnown RBP28.35■■■□□ 2.13
HIPK3-205ENST00000531504 TFCP2L1Q9NZI6 479 aa28.34■■■□□ 2.13
HIPK3-205ENST00000531504 PNPLA7Q6ZV29 1317 aa28.34■■■□□ 2.13
HIPK3-205ENST00000531504 L3MBTL2Q969R5 705 aa28.33■■■□□ 2.13
HIPK3-205ENST00000531504 GOLGB1Q14789 3259 aaKnown RBP28.31■■■□□ 2.12
HIPK3-205ENST00000531504 GRIN3BO60391 1043 aa28.3■■■□□ 2.12
HIPK3-205ENST00000531504 NME9Q86XW9 330 aa28.3■■■□□ 2.12
HIPK3-205ENST00000531504 LY75O60449 1722 aa28.29■■■□□ 2.12
HIPK3-205ENST00000531504 DDX54Q8TDD1 881 aaKnown RBP28.29■■■□□ 2.12
HIPK3-205ENST00000531504 SBNO2Q9Y2G9 1366 aa28.28■■■□□ 2.12
HIPK3-205ENST00000531504 NLGN2Q8NFZ4 835 aa28.28■■■□□ 2.12
HIPK3-205ENST00000531504 DOT1LQ8TEK3 1739 aa28.28■■■□□ 2.12
HIPK3-205ENST00000531504 HDGFL2Q7Z4V5 671 aaPredicted RBP28.26■■■□□ 2.11
HIPK3-205ENST00000531504 SYTL4Q96C24 671 aaPredicted RBP28.26■■■□□ 2.11
HIPK3-205ENST00000531504 ANKRD36BQ8N2N9 1353 aa28.25■■■□□ 2.11
HIPK3-205ENST00000531504 CD163L1Q9NR16 1453 aa28.25■■■□□ 2.11
HIPK3-205ENST00000531504 EDC4Q6P2E9 1401 aaKnown RBP28.25■■■□□ 2.11
HIPK3-205ENST00000531504 CEP350Q5VT06 3117 aa28.23■■■□□ 2.11
HIPK3-205ENST00000531504 TMC1Q8TDI8 760 aa28.22■■■□□ 2.11
HIPK3-205ENST00000531504 YBX3P16989 372 aaKnown RBP eCLIP28.21■■■□□ 2.11
HIPK3-205ENST00000531504 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms