RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 AXIN2Q9Y2T1 843 aa19.04■□□□□ 0.64
SSH3-207ENST00000531495 RREB1Q92766 1687 aa19.04■□□□□ 0.64
SSH3-207ENST00000531495 SOX12O15370 315 aa19.02■□□□□ 0.64
SSH3-207ENST00000531495 ZBTB7AO95365 584 aa19.02■□□□□ 0.64
SSH3-207ENST00000531495 NUP188Q5SRE5 1749 aa19.02■□□□□ 0.63
SSH3-207ENST00000531495 TTC21BQ7Z4L5 1316 aa19.01■□□□□ 0.63
SSH3-207ENST00000531495 PARP4Q9UKK3 1724 aaKnown RBP19.01■□□□□ 0.63
SSH3-207ENST00000531495 TXNRD1Q16881 649 aa19.01■□□□□ 0.63
SSH3-207ENST00000531495 PROM2Q8N271 834 aa19.01■□□□□ 0.63
SSH3-207ENST00000531495 ANO8Q9HCE9 1232 aaPredicted RBP19.01■□□□□ 0.63
SSH3-207ENST00000531495 TTC21AQ8NDW8 1320 aa19■□□□□ 0.63
SSH3-207ENST00000531495 PTF1AQ7RTS3 328 aa19■□□□□ 0.63
SSH3-207ENST00000531495 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
SSH3-207ENST00000531495 BCL9O00512 1426 aa19■□□□□ 0.63
SSH3-207ENST00000531495 SLC15A2Q16348 729 aa18.99■□□□□ 0.63
SSH3-207ENST00000531495 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
SSH3-207ENST00000531495 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
SSH3-207ENST00000531495 SLIT3O75094 1523 aa18.97■□□□□ 0.63
SSH3-207ENST00000531495 CPSF1Q10570 1443 aaKnown RBP18.97■□□□□ 0.63
SSH3-207ENST00000531495 PDGFDQ9GZP0 370 aaPredicted RBP18.96■□□□□ 0.63
SSH3-207ENST00000531495 MTFR1LQ9H019 292 aa18.96■□□□□ 0.63
SSH3-207ENST00000531495 PTGER2P43116 358 aa18.94■□□□□ 0.62
SSH3-207ENST00000531495 SYT17Q9BSW7 474 aa18.94■□□□□ 0.62
SSH3-207ENST00000531495 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
SSH3-207ENST00000531495 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
SSH3-207ENST00000531495 PEAK1Q9H792 1746 aa18.93■□□□□ 0.62
SSH3-207ENST00000531495 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
SSH3-207ENST00000531495 FHDC1Q9C0D6 1143 aaPredicted RBP18.92■□□□□ 0.62
SSH3-207ENST00000531495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.91■□□□□ 0.62
SSH3-207ENST00000531495 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
SSH3-207ENST00000531495 LRRC37A3O60309 1634 aa18.91■□□□□ 0.62
SSH3-207ENST00000531495 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
SSH3-207ENST00000531495 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
SSH3-207ENST00000531495 IL2RBP14784 551 aa18.9■□□□□ 0.62
SSH3-207ENST00000531495 QRICH2Q9H0J4 1663 aa18.89■□□□□ 0.61
SSH3-207ENST00000531495 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
SSH3-207ENST00000531495 ARXQ96QS3 562 aa18.89■□□□□ 0.61
SSH3-207ENST00000531495 HDGFL2Q7Z4V5 671 aaPredicted RBP18.88■□□□□ 0.61
SSH3-207ENST00000531495 ZNF784Q8NCA9 323 aaPredicted RBP18.88■□□□□ 0.61
SSH3-207ENST00000531495 COL18A1P39060 1754 aa18.88■□□□□ 0.61
SSH3-207ENST00000531495 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
SSH3-207ENST00000531495 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
SSH3-207ENST00000531495 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
SSH3-207ENST00000531495 PIK3C2AO00443 1686 aa18.86■□□□□ 0.61
SSH3-207ENST00000531495 TNS2Q63HR2 1409 aa18.85■□□□□ 0.61
SSH3-207ENST00000531495 ERBB3P21860 1342 aa18.85■□□□□ 0.61
SSH3-207ENST00000531495 ANKRD24Q8TF21 1146 aa18.85■□□□□ 0.61
SSH3-207ENST00000531495 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
SSH3-207ENST00000531495 USP31Q70CQ4 1352 aa18.84■□□□□ 0.61
SSH3-207ENST00000531495 SGIP1Q9BQI5 828 aa18.84■□□□□ 0.61
SSH3-207ENST00000531495 GPR162Q16538 588 aa18.83■□□□□ 0.6
SSH3-207ENST00000531495 NME9Q86XW9 330 aa18.83■□□□□ 0.6
SSH3-207ENST00000531495 SLC16A10Q8TF71 515 aa18.83■□□□□ 0.6
SSH3-207ENST00000531495 TERF2IPQ9NYB0 399 aa18.83■□□□□ 0.6
SSH3-207ENST00000531495 CASZ1Q86V15 1759 aa18.83■□□□□ 0.6
SSH3-207ENST00000531495 POLD1P28340 1107 aa18.82■□□□□ 0.6
SSH3-207ENST00000531495 SLC27A3Q5K4L6 730 aa18.82■□□□□ 0.6
SSH3-207ENST00000531495 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
SSH3-207ENST00000531495 ABCC6O95255 1503 aa18.81■□□□□ 0.6
SSH3-207ENST00000531495 DDX54Q8TDD1 881 aaKnown RBP18.81■□□□□ 0.6
SSH3-207ENST00000531495 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
SSH3-207ENST00000531495 NFAT5O94916 1531 aa18.79■□□□□ 0.6
SSH3-207ENST00000531495 KLHL34Q8N239 644 aa18.79■□□□□ 0.6
SSH3-207ENST00000531495 SLC12A5Q9H2X9 1139 aa18.79■□□□□ 0.6
SSH3-207ENST00000531495 IP6K1Q92551 441 aa18.78■□□□□ 0.6
SSH3-207ENST00000531495 LRRC4BQ9NT99 713 aa18.78■□□□□ 0.6
SSH3-207ENST00000531495 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
SSH3-207ENST00000531495 MYOM1P52179 1685 aa18.77■□□□□ 0.6
SSH3-207ENST00000531495 ZNF827Q17R98 1081 aa18.77■□□□□ 0.6
SSH3-207ENST00000531495 SYTL4Q96C24 671 aaPredicted RBP18.77■□□□□ 0.6
SSH3-207ENST00000531495 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
SSH3-207ENST00000531495 MAP3K5Q99683 1374 aa18.77■□□□□ 0.6
SSH3-207ENST00000531495 SBNO2Q9Y2G9 1366 aa18.77■□□□□ 0.6
SSH3-207ENST00000531495 RGPD5Q99666 1765 aa18.76■□□□□ 0.59
SSH3-207ENST00000531495 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
SSH3-207ENST00000531495 C1QTNF8P60827 252 aa18.76■□□□□ 0.59
SSH3-207ENST00000531495 PUS7Q96PZ0 661 aaKnown RBP18.76■□□□□ 0.59
SSH3-207ENST00000531495 WNK3Q9BYP7 1800 aa18.76■□□□□ 0.59
SSH3-207ENST00000531495 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
SSH3-207ENST00000531495 AKT1S1Q96B36 256 aa18.75■□□□□ 0.59
SSH3-207ENST00000531495 KAT6BQ8WYB5 2073 aa18.74■□□□□ 0.59
SSH3-207ENST00000531495 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
SSH3-207ENST00000531495 HMGB2P26583 209 aaKnown RBP18.74■□□□□ 0.59
SSH3-207ENST00000531495 PRIM1P49642 420 aaKnown RBP18.74■□□□□ 0.59
SSH3-207ENST00000531495 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
SSH3-207ENST00000531495 AMPHP49418 695 aa18.73■□□□□ 0.59
SSH3-207ENST00000531495 COG3Q96JB2 828 aa18.73■□□□□ 0.59
SSH3-207ENST00000531495 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
SSH3-207ENST00000531495 MSH5O43196 834 aa18.71■□□□□ 0.59
SSH3-207ENST00000531495 ZCRB1Q8TBF4 217 aaKnown RBP18.71■□□□□ 0.59
SSH3-207ENST00000531495 GRIN3BO60391 1043 aa18.69■□□□□ 0.58
SSH3-207ENST00000531495 GIGYF1O75420 1035 aaPredicted RBP18.69■□□□□ 0.58
SSH3-207ENST00000531495 PNPLA7Q6ZV29 1317 aa18.69■□□□□ 0.58
SSH3-207ENST00000531495 CCNL1Q9UK58 526 aaPredicted RBP18.68■□□□□ 0.58
SSH3-207ENST00000531495 CD163L1Q9NR16 1453 aa18.68■□□□□ 0.58
SSH3-207ENST00000531495 A0A1W2PP64 1363 aa18.68■□□□□ 0.58
SSH3-207ENST00000531495 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
SSH3-207ENST00000531495 HOXC9P31274 260 aa18.67■□□□□ 0.58
SSH3-207ENST00000531495 KCNQ4P56696 695 aa18.67■□□□□ 0.58
SSH3-207ENST00000531495 MON2Q7Z3U7 1717 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms