RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 COG3Q96JB2 828 aa15.28■□□□□ 0.04
CAPN1-221ENST00000531068 COL5A2P05997 1499 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-221ENST00000531068 FAM182BQ5T319 152 aa15.27■□□□□ 0.04
CAPN1-221ENST00000531068 CARD10Q9BWT7 1032 aa15.27■□□□□ 0.04
CAPN1-221ENST00000531068 CRYBG1Q9Y4K1 1723 aa15.26■□□□□ 0.03
CAPN1-221ENST00000531068 PHRF1Q9P1Y6 1649 aaKnown RBP15.26■□□□□ 0.03
CAPN1-221ENST00000531068 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.03
CAPN1-221ENST00000531068 DEFB132Q7Z7B7 95 aa15.26■□□□□ 0.03
CAPN1-221ENST00000531068 ANKRD36BQ8N2N9 1353 aa15.25■□□□□ 0.03
CAPN1-221ENST00000531068 NRAPQ86VF7 1730 aa15.24■□□□□ 0.03
CAPN1-221ENST00000531068 DDB1Q16531 1140 aa15.24■□□□□ 0.03
CAPN1-221ENST00000531068 EXOC5O00471 708 aa15.22■□□□□ 0.03
CAPN1-221ENST00000531068 FYB1O15117 783 aa15.22■□□□□ 0.03
CAPN1-221ENST00000531068 TRIM37O94972 964 aa15.22■□□□□ 0.03
CAPN1-221ENST00000531068 IP6K1Q92551 441 aa15.22■□□□□ 0.03
CAPN1-221ENST00000531068 NLRP2Q9NX02 1062 aa15.22■□□□□ 0.03
CAPN1-221ENST00000531068 CCDC7Q96M83 1385 aa15.22■□□□□ 0.03
CAPN1-221ENST00000531068 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
CAPN1-221ENST00000531068 ANKRD24Q8TF21 1146 aa15.21■□□□□ 0.03
CAPN1-221ENST00000531068 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.03
CAPN1-221ENST00000531068 APBA3O96018 575 aa15.2■□□□□ 0.02
CAPN1-221ENST00000531068 AMPHP49418 695 aa15.2■□□□□ 0.02
CAPN1-221ENST00000531068 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-221ENST00000531068 GGNBP2Q9H3C7 697 aa15.2■□□□□ 0.02
CAPN1-221ENST00000531068 ERBB3P21860 1342 aa15.19■□□□□ 0.02
CAPN1-221ENST00000531068 OVOS2A0A0J9YW53 1432 aa15.19■□□□□ 0.02
CAPN1-221ENST00000531068 OVOS2Q6IE36 1432 aa15.19■□□□□ 0.02
CAPN1-221ENST00000531068 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
CAPN1-221ENST00000531068 NFAT5O94916 1531 aa15.18■□□□□ 0.02
CAPN1-221ENST00000531068 POLR3GLQ9BT43 218 aa15.18■□□□□ 0.02
CAPN1-221ENST00000531068 CARD14Q9BXL6 1004 aa15.18■□□□□ 0.02
CAPN1-221ENST00000531068 EP400Q96L91 3159 aa15.18■□□□□ 0.02
CAPN1-221ENST00000531068 THSD7AQ9UPZ6 1657 aa15.18■□□□□ 0.02
CAPN1-221ENST00000531068 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
CAPN1-221ENST00000531068 AKAP12Q02952 1782 aa15.17■□□□□ 0.02
CAPN1-221ENST00000531068 ABCC6O95255 1503 aa15.17■□□□□ 0.02
CAPN1-221ENST00000531068 IL2RBP14784 551 aa15.16■□□□□ 0.02
CAPN1-221ENST00000531068 HOXC9P31274 260 aa15.16■□□□□ 0.02
CAPN1-221ENST00000531068 MARCH10Q8NA82 808 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-221ENST00000531068 CAMKK2Q96RR4 588 aa15.16■□□□□ 0.02
CAPN1-221ENST00000531068 FBLN1P23142 703 aa15.15■□□□□ 0.02
CAPN1-221ENST00000531068 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-221ENST00000531068 DISP2A7MBM2 1401 aa15.15■□□□□ 0.02
CAPN1-221ENST00000531068 CGNL1Q0VF96 1302 aa15.15■□□□□ 0.02
CAPN1-221ENST00000531068 MON2Q7Z3U7 1717 aa15.14■□□□□ 0.01
CAPN1-221ENST00000531068 PARD3Q8TEW0 1356 aa15.14■□□□□ 0.01
CAPN1-221ENST00000531068 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
CAPN1-221ENST00000531068 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-221ENST00000531068 OVOS2A0A0G2JMS6 1433 aa15.14■□□□□ 0.01
CAPN1-221ENST00000531068 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
CAPN1-221ENST00000531068 BRWD3Q6RI45 1802 aa15.13■□□□□ 0.01
CAPN1-221ENST00000531068 COL18A1P39060 1754 aa15.12■□□□□ 0.01
CAPN1-221ENST00000531068 PLSCR1O15162 318 aa15.12■□□□□ 0.01
CAPN1-221ENST00000531068 NBPF14Q5TI25 921 aa15.12■□□□□ 0.01
CAPN1-221ENST00000531068 BCL9O00512 1426 aa15.11■□□□□ 0.01
CAPN1-221ENST00000531068 NSD3Q9BZ95 1437 aa15.11■□□□□ 0.01
CAPN1-221ENST00000531068 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
CAPN1-221ENST00000531068 PANK3Q9H999 370 aa15.1■□□□□ 0.01
CAPN1-221ENST00000531068 KIF24Q5T7B8 1368 aa15.1■□□□□ 0.01
CAPN1-221ENST00000531068 HSP90AB2PQ58FF8 381 aa15.08■□□□□ 0
CAPN1-221ENST00000531068 USP54Q70EL1 1684 aa15.07■□□□□ 0
CAPN1-221ENST00000531068 PSDA5PKW4 1024 aaPredicted RBP15.07■□□□□ 0
CAPN1-221ENST00000531068 PPM1GO15355 546 aaPredicted RBP15.07■□□□□ 0
CAPN1-221ENST00000531068 R3HDM1Q15032 1099 aaKnown RBP15.07■□□□□ 0
CAPN1-221ENST00000531068 NBPF6Q5VWK0 638 aa15.07■□□□□ 0
CAPN1-221ENST00000531068 NBPF4Q96M43 638 aa15.07■□□□□ 0
CAPN1-221ENST00000531068 INSRP06213 1382 aa15.07■□□□□ 0
CAPN1-221ENST00000531068 SMG6Q86US8 1419 aaKnown RBP15.07■□□□□ 0
CAPN1-221ENST00000531068 ZCRB1Q8TBF4 217 aaKnown RBP15.06■□□□□ 0
CAPN1-221ENST00000531068 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
CAPN1-221ENST00000531068 RAPGEF4Q8WZA2 1011 aa15.06■□□□□ 0
CAPN1-221ENST00000531068 FLT4P35916 1363 aa15.06■□□□□ 0
CAPN1-221ENST00000531068 TNS2Q63HR2 1409 aa15.06■□□□□ 0
CAPN1-221ENST00000531068 KNSTRNQ9Y448 316 aa15.05■□□□□ -0
CAPN1-221ENST00000531068 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
CAPN1-221ENST00000531068 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
CAPN1-221ENST00000531068 TATP17735 454 aaPredicted RBP15.04■□□□□ -0
CAPN1-221ENST00000531068 PTF1AQ7RTS3 328 aa15.04■□□□□ -0
CAPN1-221ENST00000531068 EMILIN1Q9Y6C2 1016 aa15.04■□□□□ -0
CAPN1-221ENST00000531068 ZNF316A6NFI3 1004 aaPredicted RBP15.03■□□□□ -0
CAPN1-221ENST00000531068 KCNQ2O43526 872 aa15.03■□□□□ -0
CAPN1-221ENST00000531068 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
CAPN1-221ENST00000531068 POLKQ9UBT6 870 aa15.03■□□□□ -0
CAPN1-221ENST00000531068 TNNT2P45379 298 aaPredicted RBP15.02■□□□□ -0
CAPN1-221ENST00000531068 MORC1Q86VD1 984 aa15.02■□□□□ -0
CAPN1-221ENST00000531068 RGPD1P0DJD0 1748 aa15.02□□□□□ -0.01
CAPN1-221ENST00000531068 NSD2O96028 1365 aa15.01□□□□□ -0.01
CAPN1-221ENST00000531068 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
CAPN1-221ENST00000531068 KIF7Q2M1P5 1343 aa15□□□□□ -0.01
CAPN1-221ENST00000531068 TXNRD1Q16881 649 aa15□□□□□ -0.01
CAPN1-221ENST00000531068 PROM2Q8N271 834 aa15□□□□□ -0.01
CAPN1-221ENST00000531068 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
CAPN1-221ENST00000531068 SYTL4Q96C24 671 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-221ENST00000531068 PRIM1P49642 420 aaKnown RBP14.97□□□□□ -0.01
CAPN1-221ENST00000531068 EYA1Q99502 592 aa14.97□□□□□ -0.01
CAPN1-221ENST00000531068 STK32BQ9NY57 414 aa14.97□□□□□ -0.01
CAPN1-221ENST00000531068 SPG7Q9UQ90 795 aa14.97□□□□□ -0.01
CAPN1-221ENST00000531068 PCDH11XQ9BZA7 1347 aa14.96□□□□□ -0.01
CAPN1-221ENST00000531068 PCDH11YQ9BZA8 1340 aa14.96□□□□□ -0.01
CAPN1-221ENST00000531068 PEAK1Q9H792 1746 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms