RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
CTNND1-228ENST00000531007 MSH6P52701 1360 aa13.24□□□□□ -0.29
CTNND1-228ENST00000531007 SEC24BO95487 1268 aa13.24□□□□□ -0.29
CTNND1-228ENST00000531007 ATF3P18847 181 aa13.24□□□□□ -0.29
CTNND1-228ENST00000531007 NGDNQ8NEJ9 315 aaKnown RBP13.24□□□□□ -0.29
CTNND1-228ENST00000531007 KIF20BQ96Q89 1820 aa13.24□□□□□ -0.29
CTNND1-228ENST00000531007 STRCP1A6NGW2 1772 aa13.23□□□□□ -0.29
CTNND1-228ENST00000531007 PNISRQ8TF01 805 aaKnown RBP13.23□□□□□ -0.29
CTNND1-228ENST00000531007 FBXO41Q8TF61 875 aa13.23□□□□□ -0.29
CTNND1-228ENST00000531007 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
CTNND1-228ENST00000531007 KIF1AQ12756 1690 aa13.22□□□□□ -0.29
CTNND1-228ENST00000531007 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
CTNND1-228ENST00000531007 NRKQ7Z2Y5 1582 aa13.22□□□□□ -0.29
CTNND1-228ENST00000531007 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
CTNND1-228ENST00000531007 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.29
CTNND1-228ENST00000531007 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.29
CTNND1-228ENST00000531007 TTC21BQ7Z4L5 1316 aa13.21□□□□□ -0.29
CTNND1-228ENST00000531007 POTEB2H3BUK9 544 aa13.21□□□□□ -0.29
CTNND1-228ENST00000531007 CNGB1Q14028 1251 aaPredicted RBP13.21□□□□□ -0.29
CTNND1-228ENST00000531007 COG3Q96JB2 828 aa13.21□□□□□ -0.29
CTNND1-228ENST00000531007 CFAP53Q96M91 514 aa13.21□□□□□ -0.29
CTNND1-228ENST00000531007 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
CTNND1-228ENST00000531007 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
CTNND1-228ENST00000531007 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
CTNND1-228ENST00000531007 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
CTNND1-228ENST00000531007 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
CTNND1-228ENST00000531007 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
CTNND1-228ENST00000531007 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
CTNND1-228ENST00000531007 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
CTNND1-228ENST00000531007 RGPD8O14715 1765 aaPredicted RBP13.19□□□□□ -0.3
CTNND1-228ENST00000531007 POTEFA5A3E0 1075 aa13.18□□□□□ -0.3
CTNND1-228ENST00000531007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTNND1-228ENST00000531007 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
CTNND1-228ENST00000531007 GGNBP2Q9H3C7 697 aa13.18□□□□□ -0.3
CTNND1-228ENST00000531007 MST1RQ04912 1400 aa13.18□□□□□ -0.3
CTNND1-228ENST00000531007 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
CTNND1-228ENST00000531007 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
CTNND1-228ENST00000531007 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
CTNND1-228ENST00000531007 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
CTNND1-228ENST00000531007 USP54Q70EL1 1684 aa13.17□□□□□ -0.3
CTNND1-228ENST00000531007 OVOS2A0A0J9YW53 1432 aa13.16□□□□□ -0.3
CTNND1-228ENST00000531007 OVOS2Q6IE36 1432 aa13.16□□□□□ -0.3
CTNND1-228ENST00000531007 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
CTNND1-228ENST00000531007 PLCG2P16885 1265 aa13.16□□□□□ -0.3
CTNND1-228ENST00000531007 PSME1Q06323 249 aa13.16□□□□□ -0.3
CTNND1-228ENST00000531007 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
CTNND1-228ENST00000531007 RBM33Q96EV2 1170 aaKnown RBP13.16□□□□□ -0.3
CTNND1-228ENST00000531007 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
CTNND1-228ENST00000531007 MTHFSP49914 203 aa13.15□□□□□ -0.3
CTNND1-228ENST00000531007 NME9Q86XW9 330 aa13.15□□□□□ -0.3
CTNND1-228ENST00000531007 NGEFQ8N5V2 710 aa13.15□□□□□ -0.3
CTNND1-228ENST00000531007 PNPLA6Q8IY17 1366 aa13.15□□□□□ -0.3
CTNND1-228ENST00000531007 XIRP1Q702N8 1843 aaKnown RBP13.15□□□□□ -0.3
CTNND1-228ENST00000531007 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
CTNND1-228ENST00000531007 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
CTNND1-228ENST00000531007 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
CTNND1-228ENST00000531007 KIF24Q5T7B8 1368 aa13.14□□□□□ -0.31
CTNND1-228ENST00000531007 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
CTNND1-228ENST00000531007 IQSEC2Q5JU85 1478 aa13.13□□□□□ -0.31
CTNND1-228ENST00000531007 MAMSTRQ6ZN01 415 aa13.13□□□□□ -0.31
CTNND1-228ENST00000531007 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
CTNND1-228ENST00000531007 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
CTNND1-228ENST00000531007 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
CTNND1-228ENST00000531007 HNRNPUQ00839 825 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTNND1-228ENST00000531007 ORAI2Q96SN7 254 aa13.12□□□□□ -0.31
CTNND1-228ENST00000531007 PNNQ9H307 717 aaKnown RBP13.12□□□□□ -0.31
CTNND1-228ENST00000531007 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
CTNND1-228ENST00000531007 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
CTNND1-228ENST00000531007 ZBED9Q6R2W3 1325 aa13.12□□□□□ -0.31
CTNND1-228ENST00000531007 TNNT2P45379 298 aaPredicted RBP13.11□□□□□ -0.31
CTNND1-228ENST00000531007 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
CTNND1-228ENST00000531007 KCNH5Q8NCM2 988 aa13.11□□□□□ -0.31
CTNND1-228ENST00000531007 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
CTNND1-228ENST00000531007 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
CTNND1-228ENST00000531007 PIK3C2AO00443 1686 aa13.1□□□□□ -0.31
CTNND1-228ENST00000531007 NLRP6P59044 892 aa13.1□□□□□ -0.31
CTNND1-228ENST00000531007 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
CTNND1-228ENST00000531007 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
CTNND1-228ENST00000531007 FOXO3O43524 673 aa13.09□□□□□ -0.31
CTNND1-228ENST00000531007 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
CTNND1-228ENST00000531007 TOM1O60784 492 aa13.08□□□□□ -0.32
CTNND1-228ENST00000531007 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
CTNND1-228ENST00000531007 ADAMTS8Q9UP79 889 aa13.08□□□□□ -0.32
CTNND1-228ENST00000531007 COL3A1P02461 1466 aaPredicted RBP13.08□□□□□ -0.32
CTNND1-228ENST00000531007 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
CTNND1-228ENST00000531007 TRPM3Q9HCF6 1732 aaPredicted RBP13.08□□□□□ -0.32
CTNND1-228ENST00000531007 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
CTNND1-228ENST00000531007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
CTNND1-228ENST00000531007 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
CTNND1-228ENST00000531007 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
CTNND1-228ENST00000531007 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
CTNND1-228ENST00000531007 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
CTNND1-228ENST00000531007 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
CTNND1-228ENST00000531007 SLIT3O75094 1523 aa13.05□□□□□ -0.32
CTNND1-228ENST00000531007 PIP4K2BP78356 416 aa13.05□□□□□ -0.32
CTNND1-228ENST00000531007 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
CTNND1-228ENST00000531007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.321e-17■■□□□ 11.6
CTNND1-228ENST00000531007 USP19O94966 1318 aa13.05□□□□□ -0.32
CTNND1-228ENST00000531007 FLT4P35916 1363 aa13.05□□□□□ -0.32
CTNND1-228ENST00000531007 PXDNQ92626 1479 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms