RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 WDR17Q8IZU2 1322 aa22.55■■□□□ 1.2
CHMP4A-204ENST00000530996 TTC21AQ8NDW8 1320 aa22.55■■□□□ 1.2
CHMP4A-204ENST00000530996 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
CHMP4A-204ENST00000530996 AKAP12Q02952 1782 aa22.51■■□□□ 1.19
CHMP4A-204ENST00000530996 CARD11Q9BXL7 1154 aa22.51■■□□□ 1.19
CHMP4A-204ENST00000530996 AXIN2Q9Y2T1 843 aa22.51■■□□□ 1.19
CHMP4A-204ENST00000530996 ARHGEF25Q86VW2 580 aa22.5■■□□□ 1.19
CHMP4A-204ENST00000530996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.5■■□□□ 1.19
CHMP4A-204ENST00000530996 NFAT5O94916 1531 aa22.49■■□□□ 1.19
CHMP4A-204ENST00000530996 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
CHMP4A-204ENST00000530996 CDCA7Q9BWT1 371 aaPredicted RBP22.48■■□□□ 1.19
CHMP4A-204ENST00000530996 TONSLQ96HA7 1378 aa22.48■■□□□ 1.19
CHMP4A-204ENST00000530996 PEAK1Q9H792 1746 aa22.48■■□□□ 1.19
CHMP4A-204ENST00000530996 COL18A1P39060 1754 aa22.48■■□□□ 1.19
CHMP4A-204ENST00000530996 WNK3Q9BYP7 1800 aa22.47■■□□□ 1.19
CHMP4A-204ENST00000530996 PPP1R1BQ9UD71 204 aaPredicted RBP22.47■■□□□ 1.19
CHMP4A-204ENST00000530996 SBNO2Q9Y2G9 1366 aa22.47■■□□□ 1.19
CHMP4A-204ENST00000530996 CARD10Q9BWT7 1032 aa22.45■■□□□ 1.18
CHMP4A-204ENST00000530996 ABCC6O95255 1503 aa22.44■■□□□ 1.18
CHMP4A-204ENST00000530996 MON2Q7Z3U7 1717 aa22.44■■□□□ 1.18
CHMP4A-204ENST00000530996 HDGFL2Q7Z4V5 671 aaPredicted RBP22.44■■□□□ 1.18
CHMP4A-204ENST00000530996 CCDC7Q96M83 1385 aa22.44■■□□□ 1.18
CHMP4A-204ENST00000530996 NME9Q86XW9 330 aa22.43■■□□□ 1.18
CHMP4A-204ENST00000530996 MARCH10Q8NA82 808 aaPredicted RBP22.43■■□□□ 1.18
CHMP4A-204ENST00000530996 BCL11BQ9C0K0 894 aaPredicted RBP22.43■■□□□ 1.18
CHMP4A-204ENST00000530996 TNS2Q63HR2 1409 aa22.42■■□□□ 1.18
CHMP4A-204ENST00000530996 SPON1Q9HCB6 807 aa22.42■■□□□ 1.18
CHMP4A-204ENST00000530996 RGPD3A6NKT7 1758 aaPredicted RBP22.41■■□□□ 1.18
CHMP4A-204ENST00000530996 RGPD4Q7Z3J3 1758 aa22.41■■□□□ 1.18
CHMP4A-204ENST00000530996 PTF1AQ7RTS3 328 aa22.41■■□□□ 1.18
CHMP4A-204ENST00000530996 EXOC5O00471 708 aa22.4■■□□□ 1.18
CHMP4A-204ENST00000530996 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
CHMP4A-204ENST00000530996 NLRP2Q9NX02 1062 aa22.4■■□□□ 1.18
CHMP4A-204ENST00000530996 PLSCR1O15162 318 aa22.39■■□□□ 1.17
CHMP4A-204ENST00000530996 CD163L1Q9NR16 1453 aa22.39■■□□□ 1.17
CHMP4A-204ENST00000530996 EDC4Q6P2E9 1401 aaKnown RBP22.39■■□□□ 1.17
CHMP4A-204ENST00000530996 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
CHMP4A-204ENST00000530996 RGPD5Q99666 1765 aa22.38■■□□□ 1.17
CHMP4A-204ENST00000530996 ERBB3P21860 1342 aa22.38■■□□□ 1.17
CHMP4A-204ENST00000530996 KCNQ2O43526 872 aa22.38■■□□□ 1.17
CHMP4A-204ENST00000530996 TERF2IPQ9NYB0 399 aa22.37■■□□□ 1.17
CHMP4A-204ENST00000530996 BCL9O00512 1426 aa22.37■■□□□ 1.17
CHMP4A-204ENST00000530996 A0A1W2PP64 1363 aa22.37■■□□□ 1.17
CHMP4A-204ENST00000530996 SLC12A5Q9H2X9 1139 aa22.36■■□□□ 1.17
CHMP4A-204ENST00000530996 SBF2Q86WG5 1849 aa22.36■■□□□ 1.17
CHMP4A-204ENST00000530996 USP54Q70EL1 1684 aa22.35■■□□□ 1.17
CHMP4A-204ENST00000530996 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
CHMP4A-204ENST00000530996 STK32BQ9NY57 414 aa22.33■■□□□ 1.17
CHMP4A-204ENST00000530996 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
CHMP4A-204ENST00000530996 IL2RBP14784 551 aa22.32■■□□□ 1.16
CHMP4A-204ENST00000530996 ACSBG1Q96GR2 724 aa22.32■■□□□ 1.16
CHMP4A-204ENST00000530996 NINLQ9Y2I6 1382 aa22.32■■□□□ 1.16
CHMP4A-204ENST00000530996 LTN1O94822 1766 aa22.31■■□□□ 1.16
CHMP4A-204ENST00000530996 TXNRD1Q16881 649 aa22.31■■□□□ 1.16
CHMP4A-204ENST00000530996 ZBTB7AO95365 584 aa22.3■■□□□ 1.16
CHMP4A-204ENST00000530996 NHSQ6T4R5 1651 aa22.29■■□□□ 1.16
CHMP4A-204ENST00000530996 PROM2Q8N271 834 aa22.28■■□□□ 1.16
CHMP4A-204ENST00000530996 LTV1Q96GA3 475 aaPredicted RBP22.28■■□□□ 1.16
CHMP4A-204ENST00000530996 CASZ1Q86V15 1759 aa22.27■■□□□ 1.16
CHMP4A-204ENST00000530996 YY1P25490 414 aa22.27■■□□□ 1.16
CHMP4A-204ENST00000530996 PDGFDQ9GZP0 370 aaPredicted RBP22.27■■□□□ 1.16
CHMP4A-204ENST00000530996 COG3Q96JB2 828 aa22.26■■□□□ 1.15
CHMP4A-204ENST00000530996 ST20-MTHFSA0A0A6YYL1 179 aa22.25■■□□□ 1.15
CHMP4A-204ENST00000530996 SLC15A2Q16348 729 aa22.24■■□□□ 1.15
CHMP4A-204ENST00000530996 PUS7Q96PZ0 661 aaKnown RBP22.24■■□□□ 1.15
CHMP4A-204ENST00000530996 ATF5Q9Y2D1 282 aaPredicted RBP22.24■■□□□ 1.15
CHMP4A-204ENST00000530996 TESK2Q96S53 571 aa22.22■■□□□ 1.15
CHMP4A-204ENST00000530996 MYOM1P52179 1685 aa22.21■■□□□ 1.15
CHMP4A-204ENST00000530996 AMPHP49418 695 aa22.21■■□□□ 1.15
CHMP4A-204ENST00000530996 DDX54Q8TDD1 881 aaKnown RBP22.21■■□□□ 1.15
CHMP4A-204ENST00000530996 IP6K1Q92551 441 aa22.21■■□□□ 1.15
CHMP4A-204ENST00000530996 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.14
CHMP4A-204ENST00000530996 MAP3K19Q56UN5 1328 aa22.19■■□□□ 1.14
CHMP4A-204ENST00000530996 ANKRD36BQ8N2N9 1353 aa22.19■■□□□ 1.14
CHMP4A-204ENST00000530996 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
CHMP4A-204ENST00000530996 SYTL4Q96C24 671 aaPredicted RBP22.18■■□□□ 1.14
CHMP4A-204ENST00000530996 USP47Q96K76 1375 aa22.17■■□□□ 1.14
CHMP4A-204ENST00000530996 HOXC9P31274 260 aa22.17■■□□□ 1.14
CHMP4A-204ENST00000530996 MTFR1LQ9H019 292 aa22.17■■□□□ 1.14
CHMP4A-204ENST00000530996 BTAF1O14981 1849 aa22.17■■□□□ 1.14
CHMP4A-204ENST00000530996 PTGER2P43116 358 aa22.16■■□□□ 1.14
CHMP4A-204ENST00000530996 PAPPAQ13219 1627 aa22.16■■□□□ 1.14
CHMP4A-204ENST00000530996 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
CHMP4A-204ENST00000530996 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
CHMP4A-204ENST00000530996 TMF1P82094 1093 aa22.15■■□□□ 1.14
CHMP4A-204ENST00000530996 FBLN1P23142 703 aa22.14■■□□□ 1.13
CHMP4A-204ENST00000530996 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
CHMP4A-204ENST00000530996 ZNF827Q17R98 1081 aa22.13■■□□□ 1.13
CHMP4A-204ENST00000530996 RRS1Q15050 365 aaKnown RBP22.12■■□□□ 1.13
CHMP4A-204ENST00000530996 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
CHMP4A-204ENST00000530996 MEGF6O75095 1541 aa22.11■■□□□ 1.13
CHMP4A-204ENST00000530996 LRRC4BQ9NT99 713 aa22.1■■□□□ 1.13
CHMP4A-204ENST00000530996 DOT1LQ8TEK3 1739 aa22.09■■□□□ 1.13
CHMP4A-204ENST00000530996 SLC27A3Q5K4L6 730 aa22.09■■□□□ 1.13
CHMP4A-204ENST00000530996 KLHL34Q8N239 644 aa22.09■■□□□ 1.13
CHMP4A-204ENST00000530996 USHBP1Q8N6Y0 703 aa22.09■■□□□ 1.13
CHMP4A-204ENST00000530996 ZCRB1Q8TBF4 217 aaKnown RBP22.09■■□□□ 1.13
CHMP4A-204ENST00000530996 PRIM1P49642 420 aaKnown RBP22.08■■□□□ 1.13
CHMP4A-204ENST00000530996 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
CHMP4A-204ENST00000530996 ARXQ96QS3 562 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms