RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 ZBTB7CA1YPR0 619 aa15.02■□□□□ -0
CAPN1-218ENST00000530442 DDX10Q13206 875 aaKnown RBP15.02■□□□□ -0
CAPN1-218ENST00000530442 BTG4Q9NY30 223 aa15.02■□□□□ -0
CAPN1-218ENST00000530442 USP21Q9UK80 565 aa15.02■□□□□ -0
CAPN1-218ENST00000530442 RTL1A6NKG5 1358 aa15.01□□□□□ -0.01
CAPN1-218ENST00000530442 RRS1Q15050 365 aaKnown RBP15.01□□□□□ -0.01
CAPN1-218ENST00000530442 CC2D1BQ5T0F9 858 aaKnown RBP15.01□□□□□ -0.01
CAPN1-218ENST00000530442 BLMP54132 1417 aaPredicted RBP15□□□□□ -0.01
CAPN1-218ENST00000530442 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
CAPN1-218ENST00000530442 UNC5CLQ8IV45 518 aa15□□□□□ -0.01
CAPN1-218ENST00000530442 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
CAPN1-218ENST00000530442 RGPD2P0DJD1 1756 aa15□□□□□ -0.01
CAPN1-218ENST00000530442 MORC1Q86VD1 984 aa14.99□□□□□ -0.01
CAPN1-218ENST00000530442 CDK12Q9NYV4 1490 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-218ENST00000530442 TNNT2P45379 298 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-218ENST00000530442 POTEAQ6S8J7 498 aa14.98□□□□□ -0.01
CAPN1-218ENST00000530442 EMILIN1Q9Y6C2 1016 aa14.98□□□□□ -0.01
CAPN1-218ENST00000530442 FLT4P35916 1363 aa14.98□□□□□ -0.01
CAPN1-218ENST00000530442 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
CAPN1-218ENST00000530442 HOXC9P31274 260 aa14.97□□□□□ -0.01
CAPN1-218ENST00000530442 CNGB1Q14028 1251 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-218ENST00000530442 ERBB3P21860 1342 aa14.96□□□□□ -0.01
CAPN1-218ENST00000530442 VPS72Q15906 364 aa14.96□□□□□ -0.01
CAPN1-218ENST00000530442 IP6K1Q92551 441 aa14.96□□□□□ -0.01
CAPN1-218ENST00000530442 STRN4Q9NRL3 753 aa14.96□□□□□ -0.01
CAPN1-218ENST00000530442 TRPC5Q9UL62 973 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-218ENST00000530442 THSD7AQ9UPZ6 1657 aa14.96□□□□□ -0.01
CAPN1-218ENST00000530442 PARD3Q8TEW0 1356 aa14.96□□□□□ -0.02
CAPN1-218ENST00000530442 CRB1P82279 1406 aa14.95□□□□□ -0.02
CAPN1-218ENST00000530442 AMPHP49418 695 aa14.95□□□□□ -0.02
CAPN1-218ENST00000530442 POLKQ9UBT6 870 aa14.95□□□□□ -0.02
CAPN1-218ENST00000530442 WDR17Q8IZU2 1322 aa14.94□□□□□ -0.02
CAPN1-218ENST00000530442 LARP1Q6PKG0 1096 aaKnown RBP14.94□□□□□ -0.02
CAPN1-218ENST00000530442 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
CAPN1-218ENST00000530442 INSRP06213 1382 aa14.94□□□□□ -0.02
CAPN1-218ENST00000530442 SPATA31A5Q5VU36 1347 aa14.93□□□□□ -0.02
CAPN1-218ENST00000530442 SPATA31A7Q8IWB4 1347 aa14.93□□□□□ -0.02
CAPN1-218ENST00000530442 RGS12O14924 1447 aa14.93□□□□□ -0.02
CAPN1-218ENST00000530442 RGPD1P0DJD0 1748 aa14.93□□□□□ -0.02
CAPN1-218ENST00000530442 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-218ENST00000530442 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
CAPN1-218ENST00000530442 BRWD3Q6RI45 1802 aa14.92□□□□□ -0.02
CAPN1-218ENST00000530442 HSP90AB2PQ58FF8 381 aa14.92□□□□□ -0.02
CAPN1-218ENST00000530442 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
CAPN1-218ENST00000530442 GJD4Q96KN9 370 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-218ENST00000530442 LRRC37A3O60309 1634 aa14.92□□□□□ -0.02
CAPN1-218ENST00000530442 SPATA31A1Q5TZJ5 1347 aa14.92□□□□□ -0.02
CAPN1-218ENST00000530442 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-218ENST00000530442 EVA1CP58658 441 aa14.91□□□□□ -0.02
CAPN1-218ENST00000530442 RBM6P78332 1123 aaKnown RBP14.9□□□□□ -0.02
CAPN1-218ENST00000530442 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
CAPN1-218ENST00000530442 CSB-PGBD3P0DP91 1061 aa14.89□□□□□ -0.03
CAPN1-218ENST00000530442 RXRBP28702 533 aa14.89□□□□□ -0.03
CAPN1-218ENST00000530442 TOM1L2Q6ZVM7 507 aa14.89□□□□□ -0.03
CAPN1-218ENST00000530442 LTV1Q96GA3 475 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-218ENST00000530442 DISP2A7MBM2 1401 aa14.89□□□□□ -0.03
CAPN1-218ENST00000530442 NCAPD2Q15021 1401 aa14.89□□□□□ -0.03
CAPN1-218ENST00000530442 PPP2R1AP30153 589 aa14.88□□□□□ -0.03
CAPN1-218ENST00000530442 MTHFSP49914 203 aa14.88□□□□□ -0.03
CAPN1-218ENST00000530442 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
CAPN1-218ENST00000530442 SHANK3Q9BYB0 1731 aa14.88□□□□□ -0.03
CAPN1-218ENST00000530442 CARD10Q9BWT7 1032 aa14.87□□□□□ -0.03
CAPN1-218ENST00000530442 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
CAPN1-218ENST00000530442 FAM98CQ17RN3 349 aaKnown RBP14.86□□□□□ -0.03
CAPN1-218ENST00000530442 TCP11L2Q8N4U5 519 aa14.86□□□□□ -0.03
CAPN1-218ENST00000530442 RALBP1Q15311 655 aa14.85□□□□□ -0.03
CAPN1-218ENST00000530442 BARGINQ6ZT62 677 aa14.85□□□□□ -0.03
CAPN1-218ENST00000530442 NLRP2Q9NX02 1062 aa14.85□□□□□ -0.03
CAPN1-218ENST00000530442 THRAP3Q9Y2W1 955 aaKnown RBP14.85□□□□□ -0.03
CAPN1-218ENST00000530442 PKD1L3Q7Z443 1732 aa14.85□□□□□ -0.03
CAPN1-218ENST00000530442 MEGF6O75095 1541 aa14.85□□□□□ -0.03
CAPN1-218ENST00000530442 EP400Q96L91 3159 aa14.85□□□□□ -0.03
CAPN1-218ENST00000530442 NBPF6Q5VWK0 638 aa14.84□□□□□ -0.03
CAPN1-218ENST00000530442 ILDR2Q71H61 639 aa14.84□□□□□ -0.03
CAPN1-218ENST00000530442 NBPF4Q96M43 638 aa14.84□□□□□ -0.03
CAPN1-218ENST00000530442 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-218ENST00000530442 ONECUT3O60422 494 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-218ENST00000530442 USHBP1Q8N6Y0 703 aa14.83□□□□□ -0.04
CAPN1-218ENST00000530442 IGSF1Q8N6C5 1336 aa14.83□□□□□ -0.04
CAPN1-218ENST00000530442 MYBBP1AQ9BQG0 1328 aaKnown RBP14.83□□□□□ -0.04
CAPN1-218ENST00000530442 TNS2Q63HR2 1409 aa14.83□□□□□ -0.04
CAPN1-218ENST00000530442 IL13P35225 146 aa14.82□□□□□ -0.04
CAPN1-218ENST00000530442 EYA1Q99502 592 aa14.82□□□□□ -0.04
CAPN1-218ENST00000530442 SEPT12Q8IYM1 358 aa14.81□□□□□ -0.04
CAPN1-218ENST00000530442 OVOS2A0A0G2JMS6 1433 aa14.81□□□□□ -0.04
CAPN1-218ENST00000530442 A0A0G2JS52 829 aa14.79□□□□□ -0.04
CAPN1-218ENST00000530442 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
CAPN1-218ENST00000530442 KDRP35968 1356 aa14.79□□□□□ -0.04
CAPN1-218ENST00000530442 MYT1Q01538 1121 aa14.79□□□□□ -0.04
CAPN1-218ENST00000530442 IL2RBP14784 551 aa14.78□□□□□ -0.04
CAPN1-218ENST00000530442 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
CAPN1-218ENST00000530442 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
CAPN1-218ENST00000530442 CDCA7Q9BWT1 371 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-218ENST00000530442 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
CAPN1-218ENST00000530442 ANP32CO43423 234 aa14.76□□□□□ -0.05
CAPN1-218ENST00000530442 DOT1LQ8TEK3 1739 aa14.75□□□□□ -0.05
CAPN1-218ENST00000530442 DDB1Q16531 1140 aa14.75□□□□□ -0.05
CAPN1-218ENST00000530442 TOGARAM1Q9Y4F4 1720 aa14.75□□□□□ -0.05
CAPN1-218ENST00000530442 PLEKHG2Q9H7P9 1386 aa14.74□□□□□ -0.05
CAPN1-218ENST00000530442 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms