RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PARD3Q8TEW0 1356 aa29.57■■■□□ 2.32
SMPD1-204ENST00000530395 WDR17Q8IZU2 1322 aa29.57■■■□□ 2.32
SMPD1-204ENST00000530395 ABCC6O95255 1503 aa29.56■■■□□ 2.32
SMPD1-204ENST00000530395 PSDA5PKW4 1024 aaPredicted RBP29.56■■■□□ 2.32
SMPD1-204ENST00000530395 C11orf95C9JLR9 678 aaPredicted RBP29.56■■■□□ 2.32
SMPD1-204ENST00000530395 HDGFL2Q7Z4V5 671 aaPredicted RBP29.56■■■□□ 2.32
SMPD1-204ENST00000530395 CD163L1Q9NR16 1453 aa29.55■■■□□ 2.32
SMPD1-204ENST00000530395 APBA3O96018 575 aa29.55■■■□□ 2.32
SMPD1-204ENST00000530395 EZH2Q15910 746 aaKnown RBP29.55■■■□□ 2.32
SMPD1-204ENST00000530395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.54■■■□□ 2.32
SMPD1-204ENST00000530395 AXIN2Q9Y2T1 843 aa29.54■■■□□ 2.32
SMPD1-204ENST00000530395 OVOS2A0A0G2JMS6 1433 aa29.53■■■□□ 2.32
SMPD1-204ENST00000530395 OVOS2A0A0J9YW53 1432 aa29.53■■■□□ 2.32
SMPD1-204ENST00000530395 OVOS2Q6IE36 1432 aa29.53■■■□□ 2.32
SMPD1-204ENST00000530395 USP31Q70CQ4 1352 aa29.52■■■□□ 2.32
SMPD1-204ENST00000530395 PUS7Q96PZ0 661 aaKnown RBP29.52■■■□□ 2.32
SMPD1-204ENST00000530395 CAMKK2Q96RR4 588 aa29.52■■■□□ 2.32
SMPD1-204ENST00000530395 RREB1Q92766 1687 aa29.52■■■□□ 2.32
SMPD1-204ENST00000530395 CSB-PGBD3P0DP91 1061 aa29.51■■■□□ 2.31
SMPD1-204ENST00000530395 DDB1Q16531 1140 aa29.51■■■□□ 2.31
SMPD1-204ENST00000530395 TERF2IPQ9NYB0 399 aa29.51■■■□□ 2.31
SMPD1-204ENST00000530395 PEAK1Q9H792 1746 aa29.51■■■□□ 2.31
SMPD1-204ENST00000530395 LTN1O94822 1766 aa29.5■■■□□ 2.31
SMPD1-204ENST00000530395 CDCA7Q9BWT1 371 aaPredicted RBP29.5■■■□□ 2.31
SMPD1-204ENST00000530395 EDC4Q6P2E9 1401 aaKnown RBP29.5■■■□□ 2.31
SMPD1-204ENST00000530395 SLC12A5Q9H2X9 1139 aa29.49■■■□□ 2.31
SMPD1-204ENST00000530395 SLC24A1O60721 1099 aa29.48■■■□□ 2.31
SMPD1-204ENST00000530395 SBF2Q86WG5 1849 aa29.48■■■□□ 2.31
SMPD1-204ENST00000530395 R3HDM1Q15032 1099 aaKnown RBP29.47■■■□□ 2.31
SMPD1-204ENST00000530395 NME9Q86XW9 330 aa29.47■■■□□ 2.31
SMPD1-204ENST00000530395 CARD10Q9BWT7 1032 aa29.47■■■□□ 2.31
SMPD1-204ENST00000530395 NUP188Q5SRE5 1749 aa29.47■■■□□ 2.31
SMPD1-204ENST00000530395 A0A1W2PP64 1363 aa29.47■■■□□ 2.31
SMPD1-204ENST00000530395 NINLQ9Y2I6 1382 aa29.46■■■□□ 2.31
SMPD1-204ENST00000530395 CCDC7Q96M83 1385 aa29.44■■■□□ 2.3
SMPD1-204ENST00000530395 ST20-MTHFSA0A0A6YYL1 179 aa29.44■■■□□ 2.3
SMPD1-204ENST00000530395 TESK2Q96S53 571 aa29.43■■■□□ 2.3
SMPD1-204ENST00000530395 RGPD3A6NKT7 1758 aaPredicted RBP29.43■■■□□ 2.3
SMPD1-204ENST00000530395 RGPD4Q7Z3J3 1758 aa29.43■■■□□ 2.3
SMPD1-204ENST00000530395 NBPF14Q5TI25 921 aa29.38■■■□□ 2.29
SMPD1-204ENST00000530395 ERBB3P21860 1342 aa29.37■■■□□ 2.29
SMPD1-204ENST00000530395 MARCH10Q8NA82 808 aaPredicted RBP29.36■■■□□ 2.29
SMPD1-204ENST00000530395 BCL9O00512 1426 aa29.36■■■□□ 2.29
SMPD1-204ENST00000530395 EXOC5O00471 708 aa29.35■■■□□ 2.29
SMPD1-204ENST00000530395 USP47Q96K76 1375 aa29.35■■■□□ 2.29
SMPD1-204ENST00000530395 TNS2Q63HR2 1409 aa29.35■■■□□ 2.29
SMPD1-204ENST00000530395 BCL11BQ9C0K0 894 aaPredicted RBP29.34■■■□□ 2.29
SMPD1-204ENST00000530395 NLRP2Q9NX02 1062 aa29.34■■■□□ 2.29
SMPD1-204ENST00000530395 FAM208AQ9UK61 1670 aaKnown RBP29.31■■■□□ 2.28
SMPD1-204ENST00000530395 PLSCR1O15162 318 aa29.31■■■□□ 2.28
SMPD1-204ENST00000530395 TMF1P82094 1093 aa29.31■■■□□ 2.28
SMPD1-204ENST00000530395 ANKRD24Q8TF21 1146 aa29.31■■■□□ 2.28
SMPD1-204ENST00000530395 ANKRD36BQ8N2N9 1353 aa29.3■■■□□ 2.28
SMPD1-204ENST00000530395 COG3Q96JB2 828 aa29.29■■■□□ 2.28
SMPD1-204ENST00000530395 IL2RBP14784 551 aa29.26■■■□□ 2.27
SMPD1-204ENST00000530395 NHSQ6T4R5 1651 aa29.25■■■□□ 2.27
SMPD1-204ENST00000530395 IP6K1Q92551 441 aa29.25■■■□□ 2.27
SMPD1-204ENST00000530395 CDCA8Q53HL2 280 aa29.24■■■□□ 2.27
SMPD1-204ENST00000530395 PTF1AQ7RTS3 328 aa29.24■■■□□ 2.27
SMPD1-204ENST00000530395 TIMELESSQ9UNS1 1208 aa29.24■■■□□ 2.27
SMPD1-204ENST00000530395 CLSPNQ9HAW4 1339 aa29.21■■■□□ 2.27
SMPD1-204ENST00000530395 KIF20BQ96Q89 1820 aa29.2■■■□□ 2.27
SMPD1-204ENST00000530395 LTV1Q96GA3 475 aaPredicted RBP29.19■■■□□ 2.26
SMPD1-204ENST00000530395 MAP3K19Q56UN5 1328 aa29.19■■■□□ 2.26
SMPD1-204ENST00000530395 AMPHP49418 695 aa29.18■■■□□ 2.26
SMPD1-204ENST00000530395 PCGF6Q9BYE7 350 aa29.17■■■□□ 2.26
SMPD1-204ENST00000530395 KAT6BQ8WYB5 2073 aa29.17■■■□□ 2.26
SMPD1-204ENST00000530395 RTL1A6NKG5 1358 aa29.16■■■□□ 2.26
SMPD1-204ENST00000530395 HOXC9P31274 260 aa29.16■■■□□ 2.26
SMPD1-204ENST00000530395 TXNRD1Q16881 649 aa29.14■■■□□ 2.26
SMPD1-204ENST00000530395 ACSBG1Q96GR2 724 aa29.14■■■□□ 2.26
SMPD1-204ENST00000530395 SPON1Q9HCB6 807 aa29.14■■■□□ 2.26
SMPD1-204ENST00000530395 ANO8Q9HCE9 1232 aaPredicted RBP29.14■■■□□ 2.26
SMPD1-204ENST00000530395 MYOM1P52179 1685 aa29.14■■■□□ 2.26
SMPD1-204ENST00000530395 RGPD2P0DJD1 1756 aa29.13■■■□□ 2.25
SMPD1-204ENST00000530395 BTAF1O14981 1849 aa29.13■■■□□ 2.25
SMPD1-204ENST00000530395 FYB1O15117 783 aa29.13■■■□□ 2.25
SMPD1-204ENST00000530395 KCNQ2O43526 872 aa29.13■■■□□ 2.25
SMPD1-204ENST00000530395 PROM2Q8N271 834 aa29.13■■■□□ 2.25
SMPD1-204ENST00000530395 GGNBP2Q9H3C7 697 aa29.13■■■□□ 2.25
SMPD1-204ENST00000530395 CASZ1Q86V15 1759 aa29.13■■■□□ 2.25
SMPD1-204ENST00000530395 FBLN1P23142 703 aa29.1■■■□□ 2.25
SMPD1-204ENST00000530395 STK32BQ9NY57 414 aa29.09■■■□□ 2.25
SMPD1-204ENST00000530395 PPP1R1BQ9UD71 204 aaPredicted RBP29.09■■■□□ 2.25
SMPD1-204ENST00000530395 SMG6Q86US8 1419 aaKnown RBP29.09■■■□□ 2.25
SMPD1-204ENST00000530395 RRS1Q15050 365 aaKnown RBP29.08■■■□□ 2.25
SMPD1-204ENST00000530395 DDX54Q8TDD1 881 aaKnown RBP29.06■■■□□ 2.24
SMPD1-204ENST00000530395 SHANK3Q9BYB0 1731 aa29.04■■■□□ 2.24
SMPD1-204ENST00000530395 NSD3Q9BZ95 1437 aa29.03■■■□□ 2.24
SMPD1-204ENST00000530395 SLC15A2Q16348 729 aa29.03■■■□□ 2.24
SMPD1-204ENST00000530395 DOT1LQ8TEK3 1739 aa29.03■■■□□ 2.24
SMPD1-204ENST00000530395 KIF24Q5T7B8 1368 aa29.02■■■□□ 2.24
SMPD1-204ENST00000530395 MEGF6O75095 1541 aa29.02■■■□□ 2.24
SMPD1-204ENST00000530395 PAPPAQ13219 1627 aa29.01■■■□□ 2.23
SMPD1-204ENST00000530395 FLT4P35916 1363 aa29.01■■■□□ 2.23
SMPD1-204ENST00000530395 ZCRB1Q8TBF4 217 aaKnown RBP29■■■□□ 2.23
SMPD1-204ENST00000530395 INSRP06213 1382 aa29■■■□□ 2.23
SMPD1-204ENST00000530395 CARD14Q9BXL6 1004 aa28.99■■■□□ 2.23
SMPD1-204ENST00000530395 CGNL1Q0VF96 1302 aa28.98■■■□□ 2.23
SMPD1-204ENST00000530395 NBPF6Q5VWK0 638 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms