RNA–Protein interactions for RNA: ENST00000530330.1

SNX19-208, Transcript of sorting nexin 19, humanhuman

TSL 1 (best)

Gene SNX19, Length 880 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-208ENST00000530330 POTEHQ6S545 545 aa8.74□□□□□ -1.01
SNX19-208ENST00000530330 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
SNX19-208ENST00000530330 JUNDP17535 347 aa8.73□□□□□ -1.01
SNX19-208ENST00000530330 SEC13P55735 322 aa8.73□□□□□ -1.01
SNX19-208ENST00000530330 COL19A1Q14993 1142 aa8.73□□□□□ -1.01
SNX19-208ENST00000530330 SF3A1Q15459 793 aaKnown RBP8.73□□□□□ -1.01
SNX19-208ENST00000530330 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
SNX19-208ENST00000530330 SIX5Q8N196 739 aa8.73□□□□□ -1.01
SNX19-208ENST00000530330 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
SNX19-208ENST00000530330 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
SNX19-208ENST00000530330 ICMTO60725 284 aa8.72□□□□□ -1.01
SNX19-208ENST00000530330 MAMSTRQ6ZN01 415 aa8.72□□□□□ -1.01
SNX19-208ENST00000530330 PHTF2Q8N3S3 785 aa8.72□□□□□ -1.01
SNX19-208ENST00000530330 CXXC1Q9P0U4 656 aaPredicted RBP8.72□□□□□ -1.01
SNX19-208ENST00000530330 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
SNX19-208ENST00000530330 CHIC2Q9UKJ5 165 aa8.72□□□□□ -1.01
SNX19-208ENST00000530330 DOLKQ9UPQ8 538 aa8.72□□□□□ -1.01
SNX19-208ENST00000530330 PRMT3O60678 531 aa8.71□□□□□ -1.02
SNX19-208ENST00000530330 CLDN10P78369 228 aa8.71□□□□□ -1.02
SNX19-208ENST00000530330 KCNH2Q12809 1159 aa8.71□□□□□ -1.02
SNX19-208ENST00000530330 SF3B2Q13435 895 aaKnown RBP8.71□□□□□ -1.02
SNX19-208ENST00000530330 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
SNX19-208ENST00000530330 TAS1R3Q7RTX0 852 aa8.71□□□□□ -1.02
SNX19-208ENST00000530330 FAM177A1Q8N128 213 aaPredicted RBP8.71□□□□□ -1.02
SNX19-208ENST00000530330 ASB16Q96NS5 453 aa8.71□□□□□ -1.02
SNX19-208ENST00000530330 C21orf2O43822 256 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 NR1I2O75469 434 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 CCNYL3P0C7X3 344 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 PSEN2P49810 448 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 BRICD5Q6PL45 260 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 RNF19BQ6ZMZ0 732 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 CCDC125Q86Z20 511 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 ARHGAP9Q9BRR9 750 aa8.7□□□□□ -1.02
SNX19-208ENST00000530330 GTF2IP78347 998 aa8.69□□□□□ -1.02
SNX19-208ENST00000530330 PSME1Q06323 249 aa8.69□□□□□ -1.02
SNX19-208ENST00000530330 RNF20Q5VTR2 975 aa8.69□□□□□ -1.02
SNX19-208ENST00000530330 FGD1P98174 961 aa8.68□□□□□ -1.02
SNX19-208ENST00000530330 ZNF211Q13398 564 aaPredicted RBP8.68□□□□□ -1.02
SNX19-208ENST00000530330 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
SNX19-208ENST00000530330 BLOC1S3Q6QNY0 202 aa8.68□□□□□ -1.02
SNX19-208ENST00000530330 FBXO33Q7Z6M2 555 aa8.68□□□□□ -1.02
SNX19-208ENST00000530330 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
SNX19-208ENST00000530330 UBXN4Q92575 508 aa8.68□□□□□ -1.02
SNX19-208ENST00000530330 PTCD1O75127 700 aaKnown RBP8.67□□□□□ -1.02
SNX19-208ENST00000530330 POTEIP0CG38 1075 aa8.67□□□□□ -1.02
SNX19-208ENST00000530330 PBX2P40425 430 aa8.67□□□□□ -1.02
SNX19-208ENST00000530330 EAPPQ56P03 285 aaPredicted RBP8.67□□□□□ -1.02
SNX19-208ENST00000530330 CCDC102BQ68D86 513 aa8.67□□□□□ -1.02
SNX19-208ENST00000530330 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
SNX19-208ENST00000530330 ZFRQ96KR1 1074 aaKnown RBP8.67□□□□□ -1.02
SNX19-208ENST00000530330 FKBP4Q02790 459 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNX19-208ENST00000530330 OCLNQ16625 522 aa8.66□□□□□ -1.02
SNX19-208ENST00000530330 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
SNX19-208ENST00000530330 NUDT12Q9BQG2 462 aa8.66□□□□□ -1.02
SNX19-208ENST00000530330 EVA1BQ9NVM1 165 aa8.66□□□□□ -1.02
SNX19-208ENST00000530330 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
SNX19-208ENST00000530330 RGL4Q8IZJ4 473 aa8.65□□□□□ -1.02
SNX19-208ENST00000530330 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
SNX19-208ENST00000530330 GTF3C2Q8WUA4 911 aaPredicted RBP8.65□□□□□ -1.02
SNX19-208ENST00000530330 PRIMPOLQ96LW4 560 aa8.65□□□□□ -1.02
SNX19-208ENST00000530330 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
SNX19-208ENST00000530330 VPS9D1Q9Y2B5 631 aa8.65□□□□□ -1.02
SNX19-208ENST00000530330 RECKO95980 971 aa8.64□□□□□ -1.03
SNX19-208ENST00000530330 TSNAXIP1Q2TAA8 658 aa8.64□□□□□ -1.03
SNX19-208ENST00000530330 MSS51Q4VC12 460 aa8.64□□□□□ -1.03
SNX19-208ENST00000530330 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
SNX19-208ENST00000530330 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
SNX19-208ENST00000530330 ANO2Q9NQ90 1003 aa8.64□□□□□ -1.03
SNX19-208ENST00000530330 PCDHB3Q9Y5E6 796 aa8.64□□□□□ -1.03
SNX19-208ENST00000530330 SCNN1AP37088 669 aa8.63□□□□□ -1.03
SNX19-208ENST00000530330 USP4Q13107 963 aa8.63□□□□□ -1.03
SNX19-208ENST00000530330 NAALADL2Q58DX5 795 aa8.63□□□□□ -1.03
SNX19-208ENST00000530330 SCAMP3O14828 347 aaKnown RBP8.61□□□□□ -1.03
SNX19-208ENST00000530330 ZBTB7BO15156 539 aaPredicted RBP8.61□□□□□ -1.03
SNX19-208ENST00000530330 ERCC5P28715 1186 aaPredicted RBP8.61□□□□□ -1.03
SNX19-208ENST00000530330 PPP4CP60510 307 aa8.61□□□□□ -1.03
SNX19-208ENST00000530330 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
SNX19-208ENST00000530330 COL26A1Q96A83 441 aa8.61□□□□□ -1.03
SNX19-208ENST00000530330 THAP11Q96EK4 314 aa8.61□□□□□ -1.03
SNX19-208ENST00000530330 OCSTAMPQ9BR26 566 aa8.61□□□□□ -1.03
SNX19-208ENST00000530330 PPP1R1BQ9UD71 204 aaPredicted RBP8.61□□□□□ -1.03
SNX19-208ENST00000530330 KIAA1024Q9UPX6 916 aa8.61□□□□□ -1.03
SNX19-208ENST00000530330 ZCCHC6Q5VYS8 1495 aaKnown RBP8.6□□□□□ -1.03
SNX19-208ENST00000530330 SFI1A8K8P3 1242 aa8.6□□□□□ -1.03
SNX19-208ENST00000530330 M0R2N6 131 aa8.6□□□□□ -1.03
SNX19-208ENST00000530330 NDUFB5O43674 189 aa8.6□□□□□ -1.03
SNX19-208ENST00000530330 DXOO77932 396 aaKnown RBP8.6□□□□□ -1.03
SNX19-208ENST00000530330 DKK1O94907 266 aa8.6□□□□□ -1.03
SNX19-208ENST00000530330 FAM13AO94988 1023 aa8.6□□□□□ -1.03
SNX19-208ENST00000530330 DNMT3AQ9Y6K1 912 aaPredicted RBP8.6□□□□□ -1.03
SNX19-208ENST00000530330 NCLP19338 710 aaKnown RBP8.59□□□□□ -1.03
SNX19-208ENST00000530330 ARHGAP4P98171 946 aa8.59□□□□□ -1.03
SNX19-208ENST00000530330 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
SNX19-208ENST00000530330 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
SNX19-208ENST00000530330 TRIM52Q96A61 297 aa8.59□□□□□ -1.03
SNX19-208ENST00000530330 SLC10A4Q96EP9 437 aa8.59□□□□□ -1.03
SNX19-208ENST00000530330 CCDC85AQ96PX6 553 aaPredicted RBP8.59□□□□□ -1.03
SNX19-208ENST00000530330 MKNK1Q9BUB5 465 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms