RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CFHP08603 1231 aa11.55□□□□□ -0.56
SVIP-204ENST00000530199 FUT2Q10981 343 aa11.55□□□□□ -0.56
SVIP-204ENST00000530199 MTMR2Q13614 643 aa11.55□□□□□ -0.56
SVIP-204ENST00000530199 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
SVIP-204ENST00000530199 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
SVIP-204ENST00000530199 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
SVIP-204ENST00000530199 NUP153P49790 1475 aaKnown RBP11.55□□□□□ -0.56
SVIP-204ENST00000530199 KDM5CP41229 1560 aa11.54□□□□□ -0.56
SVIP-204ENST00000530199 DIP2CQ9Y2E4 1556 aa11.54□□□□□ -0.56
SVIP-204ENST00000530199 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
SVIP-204ENST00000530199 TBC1D2BQ9UPU7 963 aa11.54□□□□□ -0.56
SVIP-204ENST00000530199 ZNF518AQ6AHZ1 1483 aa11.54□□□□□ -0.56
SVIP-204ENST00000530199 MROH2AA6NES4 1674 aa11.54□□□□□ -0.56
SVIP-204ENST00000530199 SETD1AO15047 1707 aaKnown RBP11.54□□□□□ -0.56
SVIP-204ENST00000530199 ABL2P42684 1182 aa11.53□□□□□ -0.56
SVIP-204ENST00000530199 WWC1Q8IX03 1113 aa11.53□□□□□ -0.56
SVIP-204ENST00000530199 CCDC97Q96F63 343 aaPredicted RBP11.53□□□□□ -0.56
SVIP-204ENST00000530199 TK2O00142 265 aa11.52□□□□□ -0.57
SVIP-204ENST00000530199 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
SVIP-204ENST00000530199 ZFRQ96KR1 1074 aaKnown RBP11.52□□□□□ -0.57
SVIP-204ENST00000530199 CEP170BQ9Y4F5 1589 aaPredicted RBP11.52□□□□□ -0.57
SVIP-204ENST00000530199 MYO3AQ8NEV4 1616 aa11.51□□□□□ -0.57
SVIP-204ENST00000530199 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
SVIP-204ENST00000530199 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
SVIP-204ENST00000530199 ZMYM3Q14202 1370 aa11.51□□□□□ -0.57
SVIP-204ENST00000530199 RNF40O75150 1001 aa11.5□□□□□ -0.57
SVIP-204ENST00000530199 SUPT6HQ7KZ85 1726 aaKnown RBP11.49□□□□□ -0.57
SVIP-204ENST00000530199 CFAP99D6REC4 459 aa11.49□□□□□ -0.57
SVIP-204ENST00000530199 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
SVIP-204ENST00000530199 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
SVIP-204ENST00000530199 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
SVIP-204ENST00000530199 MLH3Q9UHC1 1453 aa11.49□□□□□ -0.57
SVIP-204ENST00000530199 VWDEQ8N2E2 1590 aa11.49□□□□□ -0.57
SVIP-204ENST00000530199 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
SVIP-204ENST00000530199 EFCAB2Q5VUJ9 269 aa11.48□□□□□ -0.57
SVIP-204ENST00000530199 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
SVIP-204ENST00000530199 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
SVIP-204ENST00000530199 ABCA6Q8N139 1617 aa11.47□□□□□ -0.57
SVIP-204ENST00000530199 NEURL4Q96JN8 1562 aa11.47□□□□□ -0.57
SVIP-204ENST00000530199 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
SVIP-204ENST00000530199 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
SVIP-204ENST00000530199 AFAP1Q8N556 730 aa11.47□□□□□ -0.57
SVIP-204ENST00000530199 HS3ST6Q96QI5 342 aa11.47□□□□□ -0.57
SVIP-204ENST00000530199 SAMD9Q5K651 1589 aa11.46□□□□□ -0.57
SVIP-204ENST00000530199 TSC1Q92574 1164 aa11.46□□□□□ -0.57
SVIP-204ENST00000530199 NECTIN2Q92692 538 aa11.46□□□□□ -0.57
SVIP-204ENST00000530199 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
SVIP-204ENST00000530199 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.58
SVIP-204ENST00000530199 POM121CA8CG34 1229 aa11.45□□□□□ -0.58
SVIP-204ENST00000530199 ADGRD1Q6QNK2 874 aa11.45□□□□□ -0.58
SVIP-204ENST00000530199 LRRN4Q8WUT4 740 aa11.45□□□□□ -0.58
SVIP-204ENST00000530199 SYMPKQ92797 1274 aaKnown RBP11.45□□□□□ -0.58
SVIP-204ENST00000530199 POLR1AO95602 1720 aaPredicted RBP11.44□□□□□ -0.58
SVIP-204ENST00000530199 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
SVIP-204ENST00000530199 LSM11P83369 360 aaKnown RBP eCLIP11.44□□□□□ -0.58
SVIP-204ENST00000530199 IRF5Q13568 498 aa11.44□□□□□ -0.58
SVIP-204ENST00000530199 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
SVIP-204ENST00000530199 A2ML1A8K2U0 1454 aa11.44□□□□□ -0.58
SVIP-204ENST00000530199 DNMT1P26358 1616 aaKnown RBP11.43□□□□□ -0.58
SVIP-204ENST00000530199 GPR37L1O60883 481 aa11.43□□□□□ -0.58
SVIP-204ENST00000530199 MORN1Q5T089 497 aa11.43□□□□□ -0.58
SVIP-204ENST00000530199 PRR7Q8TB68 274 aa11.43□□□□□ -0.58
SVIP-204ENST00000530199 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
SVIP-204ENST00000530199 CALR3Q96L12 384 aaKnown RBP11.43□□□□□ -0.58
SVIP-204ENST00000530199 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.43□□□□□ -0.58
SVIP-204ENST00000530199 LRRC7Q96NW7 1537 aa11.43□□□□□ -0.58
SVIP-204ENST00000530199 HRO43593 1189 aa11.42□□□□□ -0.58
SVIP-204ENST00000530199 GLMNQ92990 594 aa11.42□□□□□ -0.58
SVIP-204ENST00000530199 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
SVIP-204ENST00000530199 PUS10Q3MIT2 529 aaKnown RBP11.41□□□□□ -0.58
SVIP-204ENST00000530199 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
SVIP-204ENST00000530199 SLC27A5Q9Y2P5 690 aa11.41□□□□□ -0.58
SVIP-204ENST00000530199 SYNMO15061 1565 aa11.41□□□□□ -0.58
SVIP-204ENST00000530199 MED14O60244 1454 aa11.4□□□□□ -0.58
SVIP-204ENST00000530199 WASHC4Q2M389 1173 aa11.4□□□□□ -0.58
SVIP-204ENST00000530199 PRR14Q9BWN1 585 aa11.4□□□□□ -0.58
SVIP-204ENST00000530199 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
SVIP-204ENST00000530199 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
SVIP-204ENST00000530199 MYO5CQ9NQX4 1742 aa11.4□□□□□ -0.58
SVIP-204ENST00000530199 Q3C1V9 767 aa11.39□□□□□ -0.59
SVIP-204ENST00000530199 EPS8L1Q8TE68 723 aa11.39□□□□□ -0.59
SVIP-204ENST00000530199 PDIA4P13667 645 aaKnown RBP11.38□□□□□ -0.59
SVIP-204ENST00000530199 TRIM26Q12899 539 aaPredicted RBP11.38□□□□□ -0.59
SVIP-204ENST00000530199 PER1O15534 1290 aaPredicted RBP11.37□□□□□ -0.59
SVIP-204ENST00000530199 DESI1Q6ICB0 168 aa11.37□□□□□ -0.59
SVIP-204ENST00000530199 ANKK1Q8NFD2 765 aa11.37□□□□□ -0.59
SVIP-204ENST00000530199 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
SVIP-204ENST00000530199 ANKLE2Q86XL3 938 aa11.36□□□□□ -0.59
SVIP-204ENST00000530199 CLTCQ00610 1675 aaKnown RBP11.36□□□□□ -0.59
SVIP-204ENST00000530199 STRCP1A6NGW2 1772 aa11.36□□□□□ -0.59
SVIP-204ENST00000530199 KIDINS220Q9ULH0 1771 aa11.36□□□□□ -0.59
SVIP-204ENST00000530199 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
SVIP-204ENST00000530199 DEPDC5O75140 1603 aa11.35□□□□□ -0.59
SVIP-204ENST00000530199 SOWAHBA6NEL2 793 aa11.35□□□□□ -0.59
SVIP-204ENST00000530199 NR6A1Q15406 480 aa11.35□□□□□ -0.59
SVIP-204ENST00000530199 ADAMTS19Q8TE59 1207 aa11.35□□□□□ -0.59
SVIP-204ENST00000530199 PODXL2Q9NZ53 605 aa11.35□□□□□ -0.59
SVIP-204ENST00000530199 CDK12Q9NYV4 1490 aaPredicted RBP11.34□□□□□ -0.59
SVIP-204ENST00000530199 GOLGA8CPA6NN73 597 aa11.34□□□□□ -0.59
SVIP-204ENST00000530199 PPP4CP60510 307 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms