RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 TNNT3P45378 269 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-225ENST00000530094 SMC3Q9UQE7 1217 aa10.2□□□□□ -0.78
CTNND1-225ENST00000530094 C14orf93Q9H972 538 aaKnown RBP10.2□□□□□ -0.78
CTNND1-225ENST00000530094 FOXD4L5Q5VV16 416 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-225ENST00000530094 FOXD4L4Q8WXT5 416 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-225ENST00000530094 CNTROBQ8N137 903 aa10.19□□□□□ -0.78
CTNND1-225ENST00000530094 PDE4AP27815 886 aa10.19□□□□□ -0.78
CTNND1-225ENST00000530094 ZNF428Q96B54 188 aa10.19□□□□□ -0.78
CTNND1-225ENST00000530094 USHBP1Q8N6Y0 703 aa10.19□□□□□ -0.78
CTNND1-225ENST00000530094 GNL3LQ9NVN8 582 aaKnown RBP10.19□□□□□ -0.78
CTNND1-225ENST00000530094 CCDC73Q6ZRK6 1079 aa10.18□□□□□ -0.78
CTNND1-225ENST00000530094 BICD2Q8TD16 824 aa10.18□□□□□ -0.78
CTNND1-225ENST00000530094 RIMS2Q9UQ26 1411 aa10.18□□□□□ -0.78
CTNND1-225ENST00000530094 BRD4O60885 1362 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-225ENST00000530094 LRPPRCP42704 1394 aaKnown RBP10.18□□□□□ -0.78
CTNND1-225ENST00000530094 CDR1P51861 262 aa10.18□□□□□ -0.78
CTNND1-225ENST00000530094 WASHC4Q2M389 1173 aa10.18□□□□□ -0.78
CTNND1-225ENST00000530094 NEUROD6Q96NK8 337 aa10.18□□□□□ -0.78
CTNND1-225ENST00000530094 WWC2Q6AWC2 1192 aa10.17□□□□□ -0.78
CTNND1-225ENST00000530094 CCDC27Q2M243 656 aa10.17□□□□□ -0.78
CTNND1-225ENST00000530094 SASS6Q6UVJ0 657 aa10.17□□□□□ -0.78
CTNND1-225ENST00000530094 CDC45O75419 566 aa10.17□□□□□ -0.78
CTNND1-225ENST00000530094 RDXP35241 583 aaKnown RBP10.17□□□□□ -0.78
CTNND1-225ENST00000530094 NAT10Q9H0A0 1025 aaKnown RBP10.17□□□□□ -0.78
CTNND1-225ENST00000530094 CHMP5Q9NZZ3 219 aa10.17□□□□□ -0.78
CTNND1-225ENST00000530094 PTPRKQ15262 1439 aa10.17□□□□□ -0.78
CTNND1-225ENST00000530094 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-225ENST00000530094 CHRNA2Q15822 529 aa10.17□□□□□ -0.78
CTNND1-225ENST00000530094 EXOC6Q8TAG9 804 aa10.16□□□□□ -0.78
CTNND1-225ENST00000530094 WDR97A6NE52 1622 aa10.16□□□□□ -0.78
CTNND1-225ENST00000530094 OLFM4Q6UX06 510 aa10.16□□□□□ -0.78
CTNND1-225ENST00000530094 ATP10AO60312 1499 aa10.15□□□□□ -0.78
CTNND1-225ENST00000530094 CLASRPQ8N2M8 674 aaKnown RBP10.15□□□□□ -0.78
CTNND1-225ENST00000530094 ACEP12821 1306 aa10.15□□□□□ -0.78
CTNND1-225ENST00000530094 MYL6BP14649 208 aa10.15□□□□□ -0.78
CTNND1-225ENST00000530094 ODF2Q5BJF6 829 aa10.15□□□□□ -0.78
CTNND1-225ENST00000530094 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.78
CTNND1-225ENST00000530094 CT47A1Q5JQC4 288 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-225ENST00000530094 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.15□□□□□ -0.781e-7■■■□□ 16.3
CTNND1-225ENST00000530094 EPS15P42566 896 aa10.15□□□□□ -0.79
CTNND1-225ENST00000530094 TSR2Q969E8 191 aaKnown RBP10.15□□□□□ -0.79
CTNND1-225ENST00000530094 LETM1O95202 739 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-225ENST00000530094 CCAR2Q8N163 923 aaKnown RBP10.14□□□□□ -0.79
CTNND1-225ENST00000530094 EMILIN1Q9Y6C2 1016 aa10.14□□□□□ -0.79
CTNND1-225ENST00000530094 EXOSC9Q06265 439 aaKnown RBP10.14□□□□□ -0.79
CTNND1-225ENST00000530094 ACBD3Q9H3P7 528 aa10.14□□□□□ -0.79
CTNND1-225ENST00000530094 UHRF1BP1Q6BDS2 1440 aa10.14□□□□□ -0.79
CTNND1-225ENST00000530094 MCM2P49736 904 aa10.14□□□□□ -0.79
CTNND1-225ENST00000530094 TWISTNBQ3B726 338 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-225ENST00000530094 LMTK3Q96Q04 1460 aa10.14□□□□□ -0.79
CTNND1-225ENST00000530094 PTCD1O75127 700 aaKnown RBP10.14□□□□□ -0.79
CTNND1-225ENST00000530094 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-225ENST00000530094 VPS37CA5D8V6 355 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-225ENST00000530094 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 CCDC158Q5M9N0 1113 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 FSD1Q9BTV5 496 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 CHD1O14646 1710 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 CT47B1P0C2W7 299 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-225ENST00000530094 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 IKQ13123 557 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-225ENST00000530094 C8orf37Q96NL8 207 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 TXLNAP40222 546 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 ZSCAN25Q6NSZ9 544 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 BICDL1Q6ZP65 573 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 MYO6Q9UM54 1294 aa10.13□□□□□ -0.79
CTNND1-225ENST00000530094 MPRIPQ6WCQ1 1025 aa10.12□□□□□ -0.79
CTNND1-225ENST00000530094 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
CTNND1-225ENST00000530094 KCNA6P17658 529 aa10.12□□□□□ -0.79
CTNND1-225ENST00000530094 CDCA7LQ96GN5 454 aa10.12□□□□□ -0.79
CTNND1-225ENST00000530094 DHX8Q14562 1220 aaKnown RBP10.12□□□□□ -0.79
CTNND1-225ENST00000530094 AK7Q96M32 723 aa10.12□□□□□ -0.79
CTNND1-225ENST00000530094 TMOD3Q9NYL9 352 aa10.12□□□□□ -0.79
CTNND1-225ENST00000530094 SCAF11Q99590 1463 aaKnown RBP10.12□□□□□ -0.79
CTNND1-225ENST00000530094 NPHP3Q7Z494 1330 aa10.12□□□□□ -0.79
CTNND1-225ENST00000530094 TTC39AQ5SRH9 613 aa10.12□□□□□ -0.79
CTNND1-225ENST00000530094 PDCP20941 246 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 EXOC5O00471 708 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 CCT4P50991 539 aaKnown RBP10.11□□□□□ -0.79
CTNND1-225ENST00000530094 GCC1Q96CN9 775 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 C19orf44Q9H6X5 657 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 FYB1O15117 783 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 HOMER1Q86YM7 354 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 PANK1Q8TE04 598 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 NACAP1Q9BZK3 213 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 GNAT3A8MTJ3 354 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 TEX35Q5T0J7 233 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 CABLES1Q8TDN4 633 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 CDK5RAP3Q96JB5 506 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 MIS18AQ9NYP9 233 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 TSPOAP1O95153 1857 aa10.11□□□□□ -0.79
CTNND1-225ENST00000530094 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■■■■■ 38.5
CTNND1-225ENST00000530094 CNNM1Q9NRU3 951 aa10.1□□□□□ -0.79
CTNND1-225ENST00000530094 RPRD2Q5VT52 1461 aaKnown RBP10.1□□□□□ -0.79
CTNND1-225ENST00000530094 ATP7AQ04656 1500 aa10.1□□□□□ -0.79
CTNND1-225ENST00000530094 GNAI2P04899 355 aa10.1□□□□□ -0.79
CTNND1-225ENST00000530094 ZNF396Q96N95 335 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-225ENST00000530094 RUFY1Q96T51 708 aa10.1□□□□□ -0.79
CTNND1-225ENST00000530094 OFD1O75665 1012 aa10.1□□□□□ -0.79
CTNND1-225ENST00000530094 FCHSD2O94868 740 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms