RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CLP1Q92989 425 aaKnown RBP10.68□□□□□ -0.7
CAPRIN1-208ENST00000530008 SPSB2Q99619 263 aa10.68□□□□□ -0.7
CAPRIN1-208ENST00000530008 CDCA7Q9BWT1 371 aaPredicted RBP10.68□□□□□ -0.7
CAPRIN1-208ENST00000530008 CHIC2Q9UKJ5 165 aa10.68□□□□□ -0.7
CAPRIN1-208ENST00000530008 MAP7D1Q3KQU3 841 aa10.67□□□□□ -0.7
CAPRIN1-208ENST00000530008 ANKMY2Q8IV38 441 aa10.67□□□□□ -0.7
CAPRIN1-208ENST00000530008 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
CAPRIN1-208ENST00000530008 EML3Q32P44 896 aa10.66□□□□□ -0.7
CAPRIN1-208ENST00000530008 WNT2BQ93097 391 aa10.66□□□□□ -0.7
CAPRIN1-208ENST00000530008 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
CAPRIN1-208ENST00000530008 PRDM9Q9NQV7 894 aa10.66□□□□□ -0.7
CAPRIN1-208ENST00000530008 LHX8Q68G74 356 aa10.65□□□□□ -0.7
CAPRIN1-208ENST00000530008 TRAF7Q6Q0C0 670 aa10.64□□□□□ -0.71
CAPRIN1-208ENST00000530008 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
CAPRIN1-208ENST00000530008 DPYDQ12882 1025 aa10.63□□□□□ -0.71
CAPRIN1-208ENST00000530008 TRIM50Q86XT4 487 aa10.63□□□□□ -0.71
CAPRIN1-208ENST00000530008 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
CAPRIN1-208ENST00000530008 COPS2P61201 443 aa10.62□□□□□ -0.71
CAPRIN1-208ENST00000530008 CLDN10P78369 228 aa10.62□□□□□ -0.71
CAPRIN1-208ENST00000530008 TSGA10IPQ3SY00 556 aa10.62□□□□□ -0.71
CAPRIN1-208ENST00000530008 SH3BP5LQ7L8J4 393 aa10.62□□□□□ -0.71
CAPRIN1-208ENST00000530008 ZBTB33Q86T24 672 aa10.62□□□□□ -0.71
CAPRIN1-208ENST00000530008 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
CAPRIN1-208ENST00000530008 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
CAPRIN1-208ENST00000530008 SWI5Q1ZZU3 235 aa10.61□□□□□ -0.71
CAPRIN1-208ENST00000530008 UNC93B1Q9H1C4 597 aa10.61□□□□□ -0.71
CAPRIN1-208ENST00000530008 DNAAF2Q9NVR5 837 aaKnown RBP10.61□□□□□ -0.71
CAPRIN1-208ENST00000530008 NOD1Q9Y239 953 aa10.61□□□□□ -0.71
CAPRIN1-208ENST00000530008 ANKRD13DQ6ZTN6 518 aa10.6□□□□□ -0.71
CAPRIN1-208ENST00000530008 DZIP3Q86Y13 1208 aaKnown RBP10.6□□□□□ -0.71
CAPRIN1-208ENST00000530008 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
CAPRIN1-208ENST00000530008 SOWAHDA6NJG2 315 aa10.59□□□□□ -0.71
CAPRIN1-208ENST00000530008 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
CAPRIN1-208ENST00000530008 CCDC85AQ96PX6 553 aaPredicted RBP10.59□□□□□ -0.71
CAPRIN1-208ENST00000530008 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
CAPRIN1-208ENST00000530008 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
CAPRIN1-208ENST00000530008 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
CAPRIN1-208ENST00000530008 TLL1O43897 1013 aa10.57□□□□□ -0.72
CAPRIN1-208ENST00000530008 DKK1O94907 266 aa10.57□□□□□ -0.72
CAPRIN1-208ENST00000530008 ADH1BP00325 375 aa10.57□□□□□ -0.72
CAPRIN1-208ENST00000530008 SERPINB4P48594 390 aa10.57□□□□□ -0.72
CAPRIN1-208ENST00000530008 CCDC24Q8N4L8 307 aa10.57□□□□□ -0.72
CAPRIN1-208ENST00000530008 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 ERCC3P19447 782 aa10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 OXLD1Q5BKU9 147 aa10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 DNAJC14Q6Y2X3 702 aaPredicted RBP10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 SIX5Q8N196 739 aa10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 C1orf216Q8TAB5 229 aa10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 CARD14Q9BXL6 1004 aa10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
CAPRIN1-208ENST00000530008 MAGEB6P1A0A0J9YX57 407 aa10.55□□□□□ -0.72
CAPRIN1-208ENST00000530008 ZBTB7BO15156 539 aaPredicted RBP10.55□□□□□ -0.72
CAPRIN1-208ENST00000530008 GTF2IP78347 998 aa10.55□□□□□ -0.72
CAPRIN1-208ENST00000530008 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
CAPRIN1-208ENST00000530008 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
CAPRIN1-208ENST00000530008 ZPR1O75312 459 aa10.54□□□□□ -0.72
CAPRIN1-208ENST00000530008 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
CAPRIN1-208ENST00000530008 SCNN1AP37088 669 aa10.54□□□□□ -0.72
CAPRIN1-208ENST00000530008 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
CAPRIN1-208ENST00000530008 SEC13P55735 322 aa10.53□□□□□ -0.72
CAPRIN1-208ENST00000530008 PRMT3O60678 531 aa10.52□□□□□ -0.73
CAPRIN1-208ENST00000530008 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
CAPRIN1-208ENST00000530008 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
CAPRIN1-208ENST00000530008 THSD4Q6ZMP0 1018 aa10.52□□□□□ -0.73
CAPRIN1-208ENST00000530008 BPHLQ86WA6 291 aaPredicted RBP10.52□□□□□ -0.73
CAPRIN1-208ENST00000530008 BAP1Q92560 729 aa10.52□□□□□ -0.73
CAPRIN1-208ENST00000530008 RBM19Q9Y4C8 960 aaKnown RBP10.52□□□□□ -0.73
CAPRIN1-208ENST00000530008 NOM1Q5C9Z4 860 aaKnown RBP10.51□□□□□ -0.73
CAPRIN1-208ENST00000530008 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
CAPRIN1-208ENST00000530008 BIN2Q9UBW5 565 aaPredicted RBP10.51□□□□□ -0.73
CAPRIN1-208ENST00000530008 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 MARSP56192 900 aaKnown RBP10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 AGERQ15109 404 aa10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 OCLNQ16625 522 aa10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 MTRQ99707 1265 aa10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 CXXC1Q9P0U4 656 aaPredicted RBP10.5□□□□□ -0.73
CAPRIN1-208ENST00000530008 TAS1R3Q7RTX0 852 aa10.49□□□□□ -0.73
CAPRIN1-208ENST00000530008 TPCN2Q8NHX9 752 aa10.49□□□□□ -0.73
CAPRIN1-208ENST00000530008 FOXJ1Q92949 421 aa10.49□□□□□ -0.73
CAPRIN1-208ENST00000530008 SLC10A4Q96EP9 437 aa10.49□□□□□ -0.73
CAPRIN1-208ENST00000530008 PCDHGA11Q9Y5H2 935 aa10.49□□□□□ -0.73
CAPRIN1-208ENST00000530008 PSME1Q06323 249 aa10.48□□□□□ -0.73
CAPRIN1-208ENST00000530008 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
CAPRIN1-208ENST00000530008 C4orf48Q5BLP8 95 aa10.48□□□□□ -0.73
CAPRIN1-208ENST00000530008 NYAP1Q6ZVC0 841 aa10.48□□□□□ -0.73
CAPRIN1-208ENST00000530008 ZNF511Q8NB15 262 aa10.48□□□□□ -0.73
CAPRIN1-208ENST00000530008 SIRT1Q96EB6 747 aa10.48□□□□□ -0.73
CAPRIN1-208ENST00000530008 EGFL7Q9UHF1 273 aa10.48□□□□□ -0.73
CAPRIN1-208ENST00000530008 USP4Q13107 963 aa10.47□□□□□ -0.73
CAPRIN1-208ENST00000530008 ESPNB1AK53 854 aa10.46□□□□□ -0.73
CAPRIN1-208ENST00000530008 IGSF3O75054 1194 aa10.46□□□□□ -0.73
CAPRIN1-208ENST00000530008 ABL1P00519 1130 aa10.46□□□□□ -0.73
CAPRIN1-208ENST00000530008 NBPF20Q3BBV1 942 aa10.46□□□□□ -0.73
CAPRIN1-208ENST00000530008 PCDHB11Q9Y5F2 797 aa10.46□□□□□ -0.73
CAPRIN1-208ENST00000530008 C1QTNF2Q9BXJ5 285 aa10.45□□□□□ -0.74
CAPRIN1-208ENST00000530008 ZNF516Q92618 1163 aa10.44□□□□□ -0.74
CAPRIN1-208ENST00000530008 KCTD12Q96CX2 325 aaKnown RBP10.44□□□□□ -0.74
CAPRIN1-208ENST00000530008 BCL2L13Q9BXK5 485 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms