RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 NFKBIBQ15653 356 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 CABP1Q9NZU7 370 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 TXLNAP40222 546 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-221ENST00000529873 HSP90B2PQ58FF3 399 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 ZSCAN25Q6NSZ9 544 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 CNKSR2Q8WXI2 1034 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 ZMYND15Q9H091 742 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 SLC52A1Q9NWF4 448 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 BICRAQ9NZM4 1560 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 MBD3O95983 291 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 SMARCE1Q969G3 411 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 EPRSP07814 1512 aaKnown RBP10.12□□□□□ -0.79
CTNND1-221ENST00000529873 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
CTNND1-221ENST00000529873 PDCP20941 246 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
CTNND1-221ENST00000529873 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
CTNND1-221ENST00000529873 HDGFL1Q5TGJ6 251 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 FAM43AQ8N2R8 423 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 ANKRD30BQ9BXX2 1392 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 CAMSAP2Q08AD1 1489 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 H0YHG0 523 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 SDF4Q9BRK5 362 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 KINO60870 393 aaKnown RBP10.11□□□□□ -0.79
CTNND1-221ENST00000529873 FILIP1LQ4L180 1135 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 CYP46A1Q9Y6A2 500 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 CCDC69A6NI79 296 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 SMC2O95347 1197 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 NEFHP12036 1026 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 PIP4K2AP48426 406 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-221ENST00000529873 MYO6Q9UM54 1294 aa10.11□□□□□ -0.79
CTNND1-221ENST00000529873 R3HCC1Q9Y3T6 440 aaKnown RBP10.11□□□□□ -0.79
CTNND1-221ENST00000529873 NEK4P51957 841 aa10.1□□□□□ -0.79
CTNND1-221ENST00000529873 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
CTNND1-221ENST00000529873 CCDC173Q0VFZ6 552 aa10.1□□□□□ -0.79
CTNND1-221ENST00000529873 FAM13BQ9NYF5 915 aa10.1□□□□□ -0.79
CTNND1-221ENST00000529873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNND1-221ENST00000529873 MVPQ14764 893 aaKnown RBP10.1□□□□□ -0.79
CTNND1-221ENST00000529873 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-221ENST00000529873 NACAP1Q9BZK3 213 aa10.1□□□□□ -0.79
CTNND1-221ENST00000529873 BTBD11A6QL63 1104 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 NSD3Q9BZ95 1437 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 TRAK2O60296 914 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 BCAR3O75815 825 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 ERCC4Q92889 916 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-221ENST00000529873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■■■■■ 38.5
CTNND1-221ENST00000529873 DACH1Q9UI36 760 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 CAVIN1Q6NZI2 390 aaKnown RBP10.09□□□□□ -0.79
CTNND1-221ENST00000529873 BBXQ8WY36 941 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-221ENST00000529873 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 OFD1O75665 1012 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 AKNAQ7Z591 1439 aa10.09□□□□□ -0.79
CTNND1-221ENST00000529873 STK38Q15208 465 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 PRPF40AO75400 957 aaKnown RBP10.08□□□□□ -0.8
CTNND1-221ENST00000529873 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-221ENST00000529873 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
CTNND1-221ENST00000529873 ANKLE2Q86XL3 938 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-221ENST00000529873 MYL6BP14649 208 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 NBPF8Q3BBV2 869 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
CTNND1-221ENST00000529873 TRIM5Q9C035 493 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 KRT18P05783 430 aaKnown RBP10.08□□□□□ -0.8
CTNND1-221ENST00000529873 SIL1Q9H173 461 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
CTNND1-221ENST00000529873 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
CTNND1-221ENST00000529873 K7ELQ4 463 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-221ENST00000529873 ATF7IPQ6VMQ6 1270 aa10.07□□□□□ -0.8
CTNND1-221ENST00000529873 CCDC57Q2TAC2 916 aa10.07□□□□□ -0.8
CTNND1-221ENST00000529873 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-221ENST00000529873 LAMC3Q9Y6N6 1575 aa10.07□□□□□ -0.8
CTNND1-221ENST00000529873 AACSQ86V21 672 aa10.07□□□□□ -0.8
CTNND1-221ENST00000529873 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
CTNND1-221ENST00000529873 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
CTNND1-221ENST00000529873 FCHSD2O94868 740 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
CTNND1-221ENST00000529873 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 ARHGEF11O15085 1522 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 STK3Q13188 491 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 SYCP1Q15431 976 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 ZRSR2Q15696 482 aaKnown RBP10.06□□□□□ -0.8
CTNND1-221ENST00000529873 WDR33Q9C0J8 1336 aaKnown RBP10.06□□□□□ -0.8
CTNND1-221ENST00000529873 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 CDKL5O76039 1030 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 IRX3P78415 501 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-221ENST00000529873 RBM10P98175 930 aaKnown RBP10.06□□□□□ -0.8
CTNND1-221ENST00000529873 ZFYVE27Q5T4F4 411 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 PDRG1Q9NUG6 133 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 ABCA10Q8WWZ4 1543 aa10.06□□□□□ -0.8
CTNND1-221ENST00000529873 ZSCAN31Q96LW9 406 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-221ENST00000529873 NOL7Q9UMY1 257 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms