RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 PDGFDQ9GZP0 370 aaPredicted RBP15.15■□□□□ 0.02
COPB1-207ENST00000529866 MTFR1LQ9H019 292 aa15.15■□□□□ 0.02
COPB1-207ENST00000529866 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
COPB1-207ENST00000529866 CASZ1Q86V15 1759 aa15.14■□□□□ 0.01
COPB1-207ENST00000529866 SLC15A2Q16348 729 aa15.14■□□□□ 0.01
COPB1-207ENST00000529866 TXNRD1Q16881 649 aa15.14■□□□□ 0.01
COPB1-207ENST00000529866 PROM2Q8N271 834 aa15.14■□□□□ 0.01
COPB1-207ENST00000529866 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.01
COPB1-207ENST00000529866 SYT17Q9BSW7 474 aa15.14■□□□□ 0.01
COPB1-207ENST00000529866 FHDC1Q9C0D6 1143 aaPredicted RBP15.14■□□□□ 0.01
COPB1-207ENST00000529866 USP6P35125 1406 aa15.14■□□□□ 0.01
COPB1-207ENST00000529866 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
COPB1-207ENST00000529866 SLIT3O75094 1523 aa15.13■□□□□ 0.01
COPB1-207ENST00000529866 CSB-PGBD3P0DP91 1061 aa15.13■□□□□ 0.01
COPB1-207ENST00000529866 PTF1AQ7RTS3 328 aa15.13■□□□□ 0.01
COPB1-207ENST00000529866 CABP2Q9NPB3 220 aa15.13■□□□□ 0.01
COPB1-207ENST00000529866 CPSF1Q10570 1443 aaKnown RBP15.12■□□□□ 0.01
COPB1-207ENST00000529866 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
COPB1-207ENST00000529866 CARD10Q9BWT7 1032 aa15.11■□□□□ 0.01
COPB1-207ENST00000529866 CABP1Q9NZU7 370 aa15.11■□□□□ 0.01
COPB1-207ENST00000529866 MYOM1P52179 1685 aa15.1■□□□□ 0.01
COPB1-207ENST00000529866 EXOC5O00471 708 aa15.1■□□□□ 0.01
COPB1-207ENST00000529866 C1QTNF8P60827 252 aa15.1■□□□□ 0.01
COPB1-207ENST00000529866 ARXQ96QS3 562 aa15.09■□□□□ 0.01
COPB1-207ENST00000529866 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
COPB1-207ENST00000529866 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
COPB1-207ENST00000529866 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0
COPB1-207ENST00000529866 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
COPB1-207ENST00000529866 SGIP1Q9BQI5 828 aa15.08■□□□□ 0
COPB1-207ENST00000529866 MAP3K5Q99683 1374 aa15.08■□□□□ 0
COPB1-207ENST00000529866 TNS2Q63HR2 1409 aa15.08■□□□□ 0
COPB1-207ENST00000529866 KIAA1210Q9ULL0 1709 aa15.06■□□□□ 0
COPB1-207ENST00000529866 SOX12O15370 315 aa15.06■□□□□ 0
COPB1-207ENST00000529866 SBF2Q86WG5 1849 aa15.06■□□□□ 0
COPB1-207ENST00000529866 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
COPB1-207ENST00000529866 EVC2Q86UK5 1308 aa15.05■□□□□ -0
COPB1-207ENST00000529866 TTC21BQ7Z4L5 1316 aa15.04■□□□□ -0
COPB1-207ENST00000529866 TTC21AQ8NDW8 1320 aa15.04■□□□□ -0
COPB1-207ENST00000529866 GIGYF1O75420 1035 aaPredicted RBP15.04■□□□□ -0
COPB1-207ENST00000529866 GPR162Q16538 588 aa15.04■□□□□ -0
COPB1-207ENST00000529866 ABCC6O95255 1503 aa15.02■□□□□ -0
COPB1-207ENST00000529866 POLD1P28340 1107 aa15.02■□□□□ -0
COPB1-207ENST00000529866 ACSBG1Q96GR2 724 aa15.02■□□□□ -0
COPB1-207ENST00000529866 AKAP12Q02952 1782 aa15.02□□□□□ -0.01
COPB1-207ENST00000529866 PIK3C2AO00443 1686 aa15.02□□□□□ -0.01
COPB1-207ENST00000529866 QRICH2Q9H0J4 1663 aa15.02□□□□□ -0.01
COPB1-207ENST00000529866 WNK3Q9BYP7 1800 aa15.01□□□□□ -0.01
COPB1-207ENST00000529866 COL18A1P39060 1754 aa15.01□□□□□ -0.01
COPB1-207ENST00000529866 TRPM1Q7Z4N2 1603 aa15□□□□□ -0.01
COPB1-207ENST00000529866 KLHL34Q8N239 644 aa15□□□□□ -0.01
COPB1-207ENST00000529866 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
COPB1-207ENST00000529866 ERBB3P21860 1342 aa14.99□□□□□ -0.01
COPB1-207ENST00000529866 IL2RBP14784 551 aa14.99□□□□□ -0.01
COPB1-207ENST00000529866 ZNF827Q17R98 1081 aa14.99□□□□□ -0.01
COPB1-207ENST00000529866 IFFO2Q5TF58 517 aa14.99□□□□□ -0.01
COPB1-207ENST00000529866 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
COPB1-207ENST00000529866 NFAT5O94916 1531 aa14.98□□□□□ -0.01
COPB1-207ENST00000529866 NHSQ6T4R5 1651 aa14.98□□□□□ -0.01
COPB1-207ENST00000529866 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
COPB1-207ENST00000529866 PAPPAQ13219 1627 aa14.97□□□□□ -0.01
COPB1-207ENST00000529866 SLC27A3Q5K4L6 730 aa14.97□□□□□ -0.01
COPB1-207ENST00000529866 GOLGB1Q14789 3259 aaKnown RBP14.97□□□□□ -0.01
COPB1-207ENST00000529866 KTN1Q86UP2 1357 aaKnown RBP14.97□□□□□ -0.01
COPB1-207ENST00000529866 CHD4Q14839 1912 aa14.96□□□□□ -0.01
COPB1-207ENST00000529866 LRRC4BQ9NT99 713 aa14.95□□□□□ -0.02
COPB1-207ENST00000529866 CEP350Q5VT06 3117 aa14.95□□□□□ -0.02
COPB1-207ENST00000529866 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
COPB1-207ENST00000529866 TFCP2L1Q9NZI6 479 aa14.94□□□□□ -0.02
COPB1-207ENST00000529866 GRIN3BO60391 1043 aa14.93□□□□□ -0.02
COPB1-207ENST00000529866 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
COPB1-207ENST00000529866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.92□□□□□ -0.02
COPB1-207ENST00000529866 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
COPB1-207ENST00000529866 ROCK2O75116 1388 aaKnown RBP14.92□□□□□ -0.02
COPB1-207ENST00000529866 PNPLA7Q6ZV29 1317 aa14.92□□□□□ -0.02
COPB1-207ENST00000529866 NLGN2Q8NFZ4 835 aa14.9□□□□□ -0.02
COPB1-207ENST00000529866 DDX54Q8TDD1 881 aaKnown RBP14.89□□□□□ -0.03
COPB1-207ENST00000529866 SYTL4Q96C24 671 aaPredicted RBP14.89□□□□□ -0.03
COPB1-207ENST00000529866 BTAF1O14981 1849 aa14.88□□□□□ -0.03
COPB1-207ENST00000529866 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
COPB1-207ENST00000529866 NME9Q86XW9 330 aa14.88□□□□□ -0.03
COPB1-207ENST00000529866 L3MBTL2Q969R5 705 aa14.88□□□□□ -0.03
COPB1-207ENST00000529866 RGPD5Q99666 1765 aa14.87□□□□□ -0.03
COPB1-207ENST00000529866 ANKRD36BQ8N2N9 1353 aa14.86□□□□□ -0.03
COPB1-207ENST00000529866 SBNO2Q9Y2G9 1366 aa14.86□□□□□ -0.03
COPB1-207ENST00000529866 MSH5O43196 834 aa14.86□□□□□ -0.03
COPB1-207ENST00000529866 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
COPB1-207ENST00000529866 YBX3P16989 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
COPB1-207ENST00000529866 HMGB2P26583 209 aaKnown RBP14.85□□□□□ -0.03
COPB1-207ENST00000529866 PRIM1P49642 420 aaKnown RBP14.85□□□□□ -0.03
COPB1-207ENST00000529866 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
COPB1-207ENST00000529866 SHANK3Q9BYB0 1731 aa14.85□□□□□ -0.03
COPB1-207ENST00000529866 EDC4Q6P2E9 1401 aaKnown RBP14.84□□□□□ -0.03
COPB1-207ENST00000529866 ATP10DQ9P241 1426 aa14.84□□□□□ -0.03
COPB1-207ENST00000529866 IP6K1Q92551 441 aa14.84□□□□□ -0.03
COPB1-207ENST00000529866 GPBP1L1Q9HC44 474 aaPredicted RBP14.84□□□□□ -0.03
COPB1-207ENST00000529866 KCNQ4P56696 695 aa14.83□□□□□ -0.04
COPB1-207ENST00000529866 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
COPB1-207ENST00000529866 TERF2IPQ9NYB0 399 aa14.83□□□□□ -0.04
COPB1-207ENST00000529866 USP47Q96K76 1375 aa14.83□□□□□ -0.04
COPB1-207ENST00000529866 QSER1Q2KHR3 1735 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms