RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 USP19O94966 1318 aa20.21■□□□□ 0.83
APLF-206ENST00000529851 CFAP53Q96M91 514 aa20.2■□□□□ 0.83
APLF-206ENST00000529851 FAM208AQ9UK61 1670 aaKnown RBP20.2■□□□□ 0.82
APLF-206ENST00000529851 FRAT2O75474 233 aaPredicted RBP20.2■□□□□ 0.82
APLF-206ENST00000529851 COG3Q96JB2 828 aa20.2■□□□□ 0.82
APLF-206ENST00000529851 CAMTA1Q9Y6Y1 1673 aa20.2■□□□□ 0.82
APLF-206ENST00000529851 SKAP1Q86WV1 359 aa20.2■□□□□ 0.82
APLF-206ENST00000529851 NPHP3Q7Z494 1330 aa20.19■□□□□ 0.82
APLF-206ENST00000529851 NAP1L5Q96NT1 182 aaPredicted RBP20.19■□□□□ 0.82
APLF-206ENST00000529851 ZNF335Q9H4Z2 1342 aaPredicted RBP20.19■□□□□ 0.82
APLF-206ENST00000529851 NGDNQ8NEJ9 315 aaKnown RBP20.19■□□□□ 0.82
APLF-206ENST00000529851 RNF123Q5XPI4 1314 aa20.19■□□□□ 0.82
APLF-206ENST00000529851 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
APLF-206ENST00000529851 ARHGEF10O15013 1369 aa20.18■□□□□ 0.82
APLF-206ENST00000529851 TNS3Q68CZ2 1445 aa20.17■□□□□ 0.82
APLF-206ENST00000529851 DAXXQ9UER7 740 aaPredicted RBP20.16■□□□□ 0.82
APLF-206ENST00000529851 ABCA3Q99758 1704 aa20.16■□□□□ 0.82
APLF-206ENST00000529851 EXOC6Q8TAG9 804 aa20.16■□□□□ 0.82
APLF-206ENST00000529851 PEAK1Q9H792 1746 aa20.16■□□□□ 0.82
APLF-206ENST00000529851 LTN1O94822 1766 aa20.15■□□□□ 0.82
APLF-206ENST00000529851 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
APLF-206ENST00000529851 KCNH5Q8NCM2 988 aa20.14■□□□□ 0.82
APLF-206ENST00000529851 PNNQ9H307 717 aaKnown RBP20.14■□□□□ 0.82
APLF-206ENST00000529851 C14orf37Q86TY3 774 aa20.14■□□□□ 0.81
APLF-206ENST00000529851 SOS2Q07890 1332 aaPredicted RBP20.14■□□□□ 0.81
APLF-206ENST00000529851 A0A0U1RQG5 324 aaPredicted RBP20.13■□□□□ 0.81
APLF-206ENST00000529851 NCAPD2Q15021 1401 aa20.12■□□□□ 0.81
APLF-206ENST00000529851 LMO7Q8WWI1 1683 aa20.11■□□□□ 0.81
APLF-206ENST00000529851 ESCO1Q5FWF5 840 aa20.11■□□□□ 0.81
APLF-206ENST00000529851 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
APLF-206ENST00000529851 HSP90AA1P07900 732 aaKnown RBP20.1■□□□□ 0.81
APLF-206ENST00000529851 NME9Q86XW9 330 aa20.1■□□□□ 0.81
APLF-206ENST00000529851 GGNBP2Q9H3C7 697 aa20.1■□□□□ 0.81
APLF-206ENST00000529851 POLKQ9UBT6 870 aa20.1■□□□□ 0.81
APLF-206ENST00000529851 FLT4P35916 1363 aa20.1■□□□□ 0.81
APLF-206ENST00000529851 COL18A1P39060 1754 aa20.09■□□□□ 0.81
APLF-206ENST00000529851 CPDO75976 1380 aa20.09■□□□□ 0.81
APLF-206ENST00000529851 ARXQ96QS3 562 aa20.09■□□□□ 0.81
APLF-206ENST00000529851 SLAIN2Q9P270 581 aa20.09■□□□□ 0.81
APLF-206ENST00000529851 CDCA7LQ96GN5 454 aa20.09■□□□□ 0.81
APLF-206ENST00000529851 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
APLF-206ENST00000529851 RRP9O43818 475 aaKnown RBP20.08■□□□□ 0.8
APLF-206ENST00000529851 MTHFSP49914 203 aa20.08■□□□□ 0.8
APLF-206ENST00000529851 SPATA31A3Q5VYP0 1347 aa20.07■□□□□ 0.8
APLF-206ENST00000529851 MS4A1P11836 297 aa20.06■□□□□ 0.8
APLF-206ENST00000529851 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
APLF-206ENST00000529851 KRT28Q7Z3Y7 464 aa20.06■□□□□ 0.8
APLF-206ENST00000529851 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
APLF-206ENST00000529851 WDR43Q15061 677 aaKnown RBP eCLIP20.06■□□□□ 0.8
APLF-206ENST00000529851 CCDC27Q2M243 656 aa20.05■□□□□ 0.8
APLF-206ENST00000529851 ORAI2Q96SN7 254 aa20.05■□□□□ 0.8
APLF-206ENST00000529851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.04■□□□□ 0.8
APLF-206ENST00000529851 COL16A1Q07092 1604 aaPredicted RBP20.03■□□□□ 0.8
APLF-206ENST00000529851 DIAPH1O60610 1272 aaKnown RBP20.02■□□□□ 0.8
APLF-206ENST00000529851 KDRP35968 1356 aa20.02■□□□□ 0.8
APLF-206ENST00000529851 FCHSD2O94868 740 aa20.01■□□□□ 0.79
APLF-206ENST00000529851 IL13P35225 146 aa20.01■□□□□ 0.79
APLF-206ENST00000529851 RRP1P56182 461 aaKnown RBP20■□□□□ 0.79
APLF-206ENST00000529851 ABTB2Q8N961 1025 aa20■□□□□ 0.79
APLF-206ENST00000529851 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
APLF-206ENST00000529851 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
APLF-206ENST00000529851 PHLPP1O60346 1717 aa19.99■□□□□ 0.79
APLF-206ENST00000529851 NLRP6P59044 892 aa19.98■□□□□ 0.79
APLF-206ENST00000529851 ZNF521Q96K83 1311 aa19.98■□□□□ 0.79
APLF-206ENST00000529851 PLIN1O60240 522 aa19.97■□□□□ 0.79
APLF-206ENST00000529851 RBM10P98175 930 aaKnown RBP19.97■□□□□ 0.79
APLF-206ENST00000529851 IP6K1Q92551 441 aa19.97■□□□□ 0.79
APLF-206ENST00000529851 COL14A1Q05707 1796 aaKnown RBP19.97■□□□□ 0.79
APLF-206ENST00000529851 ADAMTS8Q9UP79 889 aa19.97■□□□□ 0.79
APLF-206ENST00000529851 MAP3K19Q56UN5 1328 aa19.96■□□□□ 0.79
APLF-206ENST00000529851 ARHGEF25Q86VW2 580 aa19.95■□□□□ 0.78
APLF-206ENST00000529851 PLEKHF1Q96S99 279 aa19.95■□□□□ 0.78
APLF-206ENST00000529851 NUTM2FA1L443 756 aa19.95■□□□□ 0.78
APLF-206ENST00000529851 FOXO3O43524 673 aa19.94■□□□□ 0.78
APLF-206ENST00000529851 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
APLF-206ENST00000529851 TOM1O60784 492 aa19.93■□□□□ 0.78
APLF-206ENST00000529851 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
APLF-206ENST00000529851 NWD2Q9ULI1 1742 aa19.92■□□□□ 0.78
APLF-206ENST00000529851 ZRANB1Q9UGI0 708 aa19.92■□□□□ 0.78
APLF-206ENST00000529851 IL16Q14005 1332 aa19.92■□□□□ 0.78
APLF-206ENST00000529851 PLCH1Q4KWH8 1693 aa19.92■□□□□ 0.78
APLF-206ENST00000529851 HOXC9P31274 260 aa19.92■□□□□ 0.78
APLF-206ENST00000529851 RBM33Q96EV2 1170 aaKnown RBP19.92■□□□□ 0.78
APLF-206ENST00000529851 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
APLF-206ENST00000529851 GCP02774 474 aa19.91■□□□□ 0.78
APLF-206ENST00000529851 ILDR1Q86SU0 546 aaPredicted RBP19.91■□□□□ 0.78
APLF-206ENST00000529851 LRRC37A3O60309 1634 aa19.9■□□□□ 0.78
APLF-206ENST00000529851 OVOS2A0A0G2JMS6 1433 aa19.9■□□□□ 0.78
APLF-206ENST00000529851 WDR63Q8IWG1 891 aa19.89■□□□□ 0.78
APLF-206ENST00000529851 LRRC59Q96AG4 307 aaKnown RBP19.89■□□□□ 0.78
APLF-206ENST00000529851 EMILIN1Q9Y6C2 1016 aa19.89■□□□□ 0.78
APLF-206ENST00000529851 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
APLF-206ENST00000529851 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
APLF-206ENST00000529851 EIF4A2Q14240 407 aaKnown RBP19.88■□□□□ 0.77
APLF-206ENST00000529851 PKD1L3Q7Z443 1732 aa19.88■□□□□ 0.77
APLF-206ENST00000529851 TRMT2AQ8IZ69 625 aaKnown RBP19.87■□□□□ 0.77
APLF-206ENST00000529851 CLCN1P35523 988 aa19.87■□□□□ 0.77
APLF-206ENST00000529851 TNNT2P45379 298 aaPredicted RBP19.87■□□□□ 0.77
APLF-206ENST00000529851 PARP4Q9UKK3 1724 aaKnown RBP19.87■□□□□ 0.77
APLF-206ENST00000529851 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms