RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ADGRB1O14514 1584 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 PHRF1Q9P1Y6 1649 aaKnown RBP5.23□□□□□ -1.57
PTPRC-213ENST00000529828 RREB1Q92766 1687 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 CAMTA1Q9Y6Y1 1673 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 ZBTB7CA1YPR0 619 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 WASLO00401 505 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-213ENST00000529828 GALR2O43603 387 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-213ENST00000529828 EVA1CP58658 441 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 NBPF8Q3BBV2 869 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 NBPF14Q5TI25 921 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 KDM2AQ9Y2K7 1162 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 SSH2Q76I76 1423 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 PARD3Q8TEW0 1356 aa5.22□□□□□ -1.57
PTPRC-213ENST00000529828 SPON1Q9HCB6 807 aa5.22□□□□□ -1.57
PTPRC-213ENST00000529828 ANO8Q9HCE9 1232 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-213ENST00000529828 EIF3AQ14152 1382 aaKnown RBP5.22□□□□□ -1.57
PTPRC-213ENST00000529828 KCNQ2O43526 872 aa5.22□□□□□ -1.57
PTPRC-213ENST00000529828 NUDT16Q96DE0 195 aaKnown RBP5.22□□□□□ -1.57
PTPRC-213ENST00000529828 PDGFDQ9GZP0 370 aaPredicted RBP5.22□□□□□ -1.57
PTPRC-213ENST00000529828 ATP7BP35670 1465 aa5.21□□□□□ -1.57
PTPRC-213ENST00000529828 POTEB2H3BUK9 544 aa5.21□□□□□ -1.58
PTPRC-213ENST00000529828 ZBTB7AO95365 584 aa5.21□□□□□ -1.58
PTPRC-213ENST00000529828 PTF1AQ7RTS3 328 aa5.21□□□□□ -1.58
PTPRC-213ENST00000529828 TCP11L2Q8N4U5 519 aa5.21□□□□□ -1.58
PTPRC-213ENST00000529828 SLC39A7Q92504 469 aa5.21□□□□□ -1.58
PTPRC-213ENST00000529828 NRKQ7Z2Y5 1582 aa5.21□□□□□ -1.58
PTPRC-213ENST00000529828 C7P10643 843 aa5.2□□□□□ -1.58
PTPRC-213ENST00000529828 BARGINQ6ZT62 677 aa5.2□□□□□ -1.58
PTPRC-213ENST00000529828 NINLQ9Y2I6 1382 aa5.2□□□□□ -1.58
PTPRC-213ENST00000529828 DCAF11Q8TEB1 546 aa5.2□□□□□ -1.58
PTPRC-213ENST00000529828 ACEP12821 1306 aa5.2□□□□□ -1.58
PTPRC-213ENST00000529828 ABTB2Q8N961 1025 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 ZNF784Q8NCA9 323 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-213ENST00000529828 CDK19Q9BWU1 502 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 BCL11BQ9C0K0 894 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-213ENST00000529828 SCUBE2Q9NQ36 999 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 MYOM1P52179 1685 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 SENP3-EIF4A1A0A087X0R7 540 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 OVOS2A0A0G2JMS6 1433 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 OVOS2A0A0J9YW53 1432 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 OVOS2Q6IE36 1432 aa5.19□□□□□ -1.58
PTPRC-213ENST00000529828 COL5A2P05997 1499 aaPredicted RBP5.19□□□□□ -1.58
PTPRC-213ENST00000529828 LMO7Q8WWI1 1683 aa5.18□□□□□ -1.58
PTPRC-213ENST00000529828 ITSN1Q15811 1721 aa5.18□□□□□ -1.58
PTPRC-213ENST00000529828 ARHGEF28Q8N1W1 1705 aaKnown RBP5.18□□□□□ -1.58
PTPRC-213ENST00000529828 GCP02774 474 aa5.18□□□□□ -1.58
PTPRC-213ENST00000529828 USP19O94966 1318 aa5.18□□□□□ -1.58
PTPRC-213ENST00000529828 POLR3AO14802 1390 aaPredicted RBP5.18□□□□□ -1.58
PTPRC-213ENST00000529828 CPDO75976 1380 aa5.18□□□□□ -1.58
PTPRC-213ENST00000529828 LRRC37A3O60309 1634 aa5.18□□□□□ -1.58
PTPRC-213ENST00000529828 CASZ1Q86V15 1759 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 PEAK1Q9H792 1746 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 PARP4Q9UKK3 1724 aaKnown RBP5.17□□□□□ -1.58
PTPRC-213ENST00000529828 TOPAZ1Q8N9V7 1692 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 CRB1P82279 1406 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 RAB3GAP2Q9H2M9 1393 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 SOX12O15370 315 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 PTGER2P43116 358 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 DDB1Q16531 1140 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 TOM1L2Q6ZVM7 507 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 PROM2Q8N271 834 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 FHDC1Q9C0D6 1143 aaPredicted RBP5.17□□□□□ -1.58
PTPRC-213ENST00000529828 METRNQ9UJH8 293 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 THRAP3Q9Y2W1 955 aaKnown RBP5.17□□□□□ -1.58
PTPRC-213ENST00000529828 ZBTB22O15209 634 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 SRPK2P78362 688 aaKnown RBP5.17□□□□□ -1.58
PTPRC-213ENST00000529828 MARCH10Q8NA82 808 aaPredicted RBP5.17□□□□□ -1.58
PTPRC-213ENST00000529828 CABP2Q9NPB3 220 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 CCDC61Q9Y6R9 512 aa5.17□□□□□ -1.58
PTPRC-213ENST00000529828 PPIP5K1Q6PFW1 1433 aa5.16□□□□□ -1.58
PTPRC-213ENST00000529828 PLSCR1O15162 318 aa5.16□□□□□ -1.58
PTPRC-213ENST00000529828 NLRP13Q86W25 1043 aa5.16□□□□□ -1.58
PTPRC-213ENST00000529828 CREBZFQ9NS37 354 aa5.16□□□□□ -1.58
PTPRC-213ENST00000529828 STK32BQ9NY57 414 aa5.16□□□□□ -1.58
PTPRC-213ENST00000529828 PLEKHG3A1L390 1219 aa5.15□□□□□ -1.58
PTPRC-213ENST00000529828 SLC24A1O60721 1099 aa5.15□□□□□ -1.58
PTPRC-213ENST00000529828 NLRP6P59044 892 aa5.15□□□□□ -1.58
PTPRC-213ENST00000529828 TXNRD1Q16881 649 aa5.15□□□□□ -1.58
PTPRC-213ENST00000529828 KLHL34Q8N239 644 aa5.15□□□□□ -1.58
PTPRC-213ENST00000529828 FAM163AQ96GL9 167 aaPredicted RBP5.15□□□□□ -1.58
PTPRC-213ENST00000529828 SYT17Q9BSW7 474 aa5.15□□□□□ -1.58
PTPRC-213ENST00000529828 AXIN2Q9Y2T1 843 aa5.15□□□□□ -1.58
PTPRC-213ENST00000529828 C1QTNF8P60827 252 aa5.15□□□□□ -1.59
PTPRC-213ENST00000529828 ASTLQ6HA08 431 aaPredicted RBP5.15□□□□□ -1.59
PTPRC-213ENST00000529828 ACSBG1Q96GR2 724 aa5.15□□□□□ -1.59
PTPRC-213ENST00000529828 SBF2Q86WG5 1849 aa5.15□□□□□ -1.59
PTPRC-213ENST00000529828 RGPD3A6NKT7 1758 aaPredicted RBP5.14□□□□□ -1.59
PTPRC-213ENST00000529828 RGPD4Q7Z3J3 1758 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 CSB-PGBD3P0DP91 1061 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 SLC15A2Q16348 729 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 NBPF1Q3BBV0 1214 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 PELP1Q8IZL8 1130 aaKnown RBP5.14□□□□□ -1.59
PTPRC-213ENST00000529828 AATKQ6ZMQ8 1374 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 WDR17Q8IZU2 1322 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 MTFR1LQ9H019 292 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 CABP1Q9NZU7 370 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 USP6P35125 1406 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 SLIT3O75094 1523 aa5.14□□□□□ -1.59
PTPRC-213ENST00000529828 C11orf95C9JLR9 678 aaPredicted RBP5.13□□□□□ -1.59
PTPRC-213ENST00000529828 ZNF827Q17R98 1081 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms