RNA–Protein interactions for RNA: ENST00000529774.1

RDX-207, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-207ENST00000529774 DXOO77932 396 aaKnown RBP10.78□□□□□ -0.68
RDX-207ENST00000529774 WNT7BP56706 349 aa10.78□□□□□ -0.68
RDX-207ENST00000529774 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
RDX-207ENST00000529774 SOX11P35716 441 aa10.77□□□□□ -0.69
RDX-207ENST00000529774 VAC14Q08AM6 782 aa10.77□□□□□ -0.69
RDX-207ENST00000529774 MTMR2Q13614 643 aa10.77□□□□□ -0.69
RDX-207ENST00000529774 PALM3A6NDB9 673 aaPredicted RBP10.76□□□□□ -0.69
RDX-207ENST00000529774 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
RDX-207ENST00000529774 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
RDX-207ENST00000529774 FOXD4L4Q8WXT5 416 aaPredicted RBP10.75□□□□□ -0.69
RDX-207ENST00000529774 LRRN4Q8WUT4 740 aa10.74□□□□□ -0.69
RDX-207ENST00000529774 LMOD1P29536 600 aaPredicted RBP10.73□□□□□ -0.69
RDX-207ENST00000529774 LCE2CQ5TA81 110 aa10.73□□□□□ -0.69
RDX-207ENST00000529774 ATG7O95352 703 aa10.72□□□□□ -0.69
RDX-207ENST00000529774 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
RDX-207ENST00000529774 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
RDX-207ENST00000529774 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
RDX-207ENST00000529774 UCN2Q96RP3 112 aa10.71□□□□□ -0.69
RDX-207ENST00000529774 VRTNQ9H8Y1 702 aa10.71□□□□□ -0.69
RDX-207ENST00000529774 NXF1Q9UBU9 619 aaKnown RBP10.71□□□□□ -0.69
RDX-207ENST00000529774 CFAP99D6REC4 459 aa10.7□□□□□ -0.7
RDX-207ENST00000529774 RBM25P49756 843 aaKnown RBP10.7□□□□□ -0.7
RDX-207ENST00000529774 SKOR1P84550 965 aa10.7□□□□□ -0.7
RDX-207ENST00000529774 PRR7Q8TB68 274 aa10.7□□□□□ -0.7
RDX-207ENST00000529774 TSC1Q92574 1164 aa10.7□□□□□ -0.7
RDX-207ENST00000529774 HLA-CQ95604 372 aa10.7□□□□□ -0.7
RDX-207ENST00000529774 SEMA3FQ13275 785 aa10.68□□□□□ -0.7
RDX-207ENST00000529774 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
RDX-207ENST00000529774 EPS8L1Q8TE68 723 aa10.68□□□□□ -0.7
RDX-207ENST00000529774 IRF7Q92985 503 aa10.68□□□□□ -0.7
RDX-207ENST00000529774 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
RDX-207ENST00000529774 TMEM88BA6NKF7 163 aa10.67□□□□□ -0.7
RDX-207ENST00000529774 C6orf229H3BNL8 230 aa10.67□□□□□ -0.7
RDX-207ENST00000529774 JUNDP17535 347 aa10.67□□□□□ -0.7
RDX-207ENST00000529774 PNMA1Q8ND90 353 aa10.67□□□□□ -0.7
RDX-207ENST00000529774 EHBP1Q8NDI1 1231 aa10.67□□□□□ -0.7
RDX-207ENST00000529774 MAFBQ9Y5Q3 323 aaPredicted RBP10.67□□□□□ -0.7
RDX-207ENST00000529774 IVNS1ABPQ9Y6Y0 642 aa10.67□□□□□ -0.7
RDX-207ENST00000529774 CARNS1A5YM72 827 aa10.66□□□□□ -0.7
RDX-207ENST00000529774 CCDC27Q2M243 656 aa10.66□□□□□ -0.7
RDX-207ENST00000529774 AMOTL2Q9Y2J4 779 aa10.66□□□□□ -0.7
RDX-207ENST00000529774 CAPN5O15484 640 aaPredicted RBP10.65□□□□□ -0.7
RDX-207ENST00000529774 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.7
RDX-207ENST00000529774 ZSCAN1Q8NBB4 408 aa10.65□□□□□ -0.7
RDX-207ENST00000529774 ZNF428Q96B54 188 aa10.65□□□□□ -0.7
RDX-207ENST00000529774 E9PSI1 815 aa10.64□□□□□ -0.71
RDX-207ENST00000529774 BMP1P13497 986 aa10.64□□□□□ -0.71
RDX-207ENST00000529774 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
RDX-207ENST00000529774 NUDT12Q9BQG2 462 aa10.64□□□□□ -0.71
RDX-207ENST00000529774 ATP9BO43861 1147 aa10.63□□□□□ -0.71
RDX-207ENST00000529774 GMPRP36959 345 aa10.63□□□□□ -0.71
RDX-207ENST00000529774 NR6A1Q15406 480 aa10.63□□□□□ -0.71
RDX-207ENST00000529774 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
RDX-207ENST00000529774 B4GALNT3Q6L9W6 998 aa10.63□□□□□ -0.71
RDX-207ENST00000529774 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
RDX-207ENST00000529774 GNEQ9Y223 722 aaKnown RBP10.61□□□□□ -0.71
RDX-207ENST00000529774 SIAH2O43255 324 aa10.6□□□□□ -0.71
RDX-207ENST00000529774 ELOAQ14241 798 aaKnown RBP10.6□□□□□ -0.71
RDX-207ENST00000529774 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
RDX-207ENST00000529774 RETREG3Q86VR2 466 aa10.6□□□□□ -0.71
RDX-207ENST00000529774 DESI1Q6ICB0 168 aa10.59□□□□□ -0.71
RDX-207ENST00000529774 H3BM21 787 aa10.58□□□□□ -0.72
RDX-207ENST00000529774 NR1H3Q13133 447 aa10.58□□□□□ -0.72
RDX-207ENST00000529774 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
RDX-207ENST00000529774 VEGFBP49765 207 aa10.57□□□□□ -0.72
RDX-207ENST00000529774 SYMPKQ92797 1274 aaKnown RBP10.57□□□□□ -0.72
RDX-207ENST00000529774 KANK4Q5T7N3 995 aaPredicted RBP10.56□□□□□ -0.72
RDX-207ENST00000529774 NFATC2IPQ8NCF5 419 aa10.56□□□□□ -0.72
RDX-207ENST00000529774 CCNYL3P0C7X3 344 aa10.55□□□□□ -0.72
RDX-207ENST00000529774 PTCRAQ6ISU1 281 aaPredicted RBP10.55□□□□□ -0.72
RDX-207ENST00000529774 SH3BP2P78314 561 aa10.54□□□□□ -0.72
RDX-207ENST00000529774 LYPD8Q6UX82 237 aa10.53□□□□□ -0.72
RDX-207ENST00000529774 ZFP42Q96MM3 310 aa10.53□□□□□ -0.72
RDX-207ENST00000529774 ZBBXA8MT70 800 aa10.52□□□□□ -0.73
RDX-207ENST00000529774 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
RDX-207ENST00000529774 SCARF1Q14162 830 aa10.52□□□□□ -0.73
RDX-207ENST00000529774 CCER1Q8TC90 406 aaPredicted RBP10.52□□□□□ -0.73
RDX-207ENST00000529774 FBXO45P0C2W1 286 aa10.51□□□□□ -0.73
RDX-207ENST00000529774 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
RDX-207ENST00000529774 PLEKHM2Q8IWE5 1019 aa10.51□□□□□ -0.73
RDX-207ENST00000529774 ZMIZ1Q9ULJ6 1067 aa10.51□□□□□ -0.73
RDX-207ENST00000529774 ERBB4Q15303 1308 aa10.51□□□□□ -0.73
RDX-207ENST00000529774 PTPRNQ16849 979 aa10.5□□□□□ -0.73
RDX-207ENST00000529774 TXNDC2Q86VQ3 553 aa10.5□□□□□ -0.73
RDX-207ENST00000529774 UNC93B1Q9H1C4 597 aa10.5□□□□□ -0.73
RDX-207ENST00000529774 TLL2Q9Y6L7 1015 aa10.5□□□□□ -0.73
RDX-207ENST00000529774 MRPL14Q6P1L8 145 aaKnown RBP10.49□□□□□ -0.73
RDX-207ENST00000529774 NOVA2Q9UNW9 492 aaKnown RBP10.49□□□□□ -0.73
RDX-207ENST00000529774 ZC3H4Q9UPT8 1303 aaKnown RBP10.49□□□□□ -0.73
RDX-207ENST00000529774 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 VARSP26640 1264 aaKnown RBP10.48□□□□□ -0.73
RDX-207ENST00000529774 NNTQ13423 1086 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 FKBPLQ9UIM3 349 aa10.48□□□□□ -0.73
RDX-207ENST00000529774 FAM196BA6NMK8 535 aa10.47□□□□□ -0.73
RDX-207ENST00000529774 SKIP12755 728 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms