RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 NOD1Q9Y239 953 aa5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 PCDHB9Q9Y5E1 797 aa5.5□□□□□ -1.53
AMBRA1-208ENST00000529558 PRMT3O60678 531 aa5.49□□□□□ -1.53
AMBRA1-208ENST00000529558 RNF40O75150 1001 aa5.49□□□□□ -1.53
AMBRA1-208ENST00000529558 ABL1P00519 1130 aa5.49□□□□□ -1.53
AMBRA1-208ENST00000529558 JUNDP17535 347 aa5.49□□□□□ -1.53
AMBRA1-208ENST00000529558 CTHP32929 405 aa5.49□□□□□ -1.53
AMBRA1-208ENST00000529558 ARMC2Q8NEN0 867 aa5.49□□□□□ -1.53
AMBRA1-208ENST00000529558 CXXC1Q9P0U4 656 aaPredicted RBP5.49□□□□□ -1.53
AMBRA1-208ENST00000529558 SEC13P55735 322 aa5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 TAGLNQ01995 201 aaKnown RBP5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 ECM1Q16610 540 aa5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 CCDC125Q86Z20 511 aa5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 SREK1Q8WXA9 508 aaKnown RBP5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 THAP11Q96EK4 314 aa5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 PRIMPOLQ96LW4 560 aa5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 ASB16Q96NS5 453 aa5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 EVA1BQ9NVM1 165 aa5.48□□□□□ -1.53
AMBRA1-208ENST00000529558 H3BRB1 525 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 FMNL1O95466 1100 aaPredicted RBP5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 CDK11BP21127 795 aaKnown RBP5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 ZC3H6P61129 1189 aaKnown RBP5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 ZNF211Q13398 564 aaPredicted RBP5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 COL19A1Q14993 1142 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 DMRTA1Q5VZB9 504 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 GLYCTKQ8IVS8 523 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 SCUBE3Q8IX30 993 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 ZFRQ96KR1 1074 aaKnown RBP5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 PRR14Q9BWN1 585 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 TUT1Q9H6E5 874 aaKnown RBP5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 DCTN4Q9UJW0 460 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 KIAA1024Q9UPX6 916 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 CDK11AQ9UQ88 783 aaPredicted RBP5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 VPS9D1Q9Y2B5 631 aa5.47□□□□□ -1.53
AMBRA1-208ENST00000529558 BHMG1C9JSJ3 638 aaPredicted RBP5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 SNPHO15079 494 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 C21orf2O43822 256 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 RECKO95980 971 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 MAPK1P28482 360 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 FKBP4Q02790 459 aaKnown RBP eCLIP5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 CCDC102BQ68D86 513 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 POTEEQ6S8J3 1075 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 ZSCAN29Q8IWY8 852 aaPredicted RBP5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 ADAM32Q8TC27 787 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 CCDC85AQ96PX6 553 aaPredicted RBP5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 ANO2Q9NQ90 1003 aa5.46□□□□□ -1.54
AMBRA1-208ENST00000529558 CCNYL3P0C7X3 344 aa5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 GTF2IP78347 998 aa5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 NBPF14Q5TI25 921 aa5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 GTF3C2Q8WUA4 911 aaPredicted RBP5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 ARHGAP9Q9BRR9 750 aa5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 NBPF3Q9H094 633 aa5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 DOLKQ9UPQ8 538 aa5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 RBM19Q9Y4C8 960 aaKnown RBP5.45□□□□□ -1.54
AMBRA1-208ENST00000529558 SFI1A8K8P3 1242 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 POTEB2H3BUK9 544 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 ARHGAP4P98171 946 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 SF3B2Q13435 895 aaKnown RBP5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 POTEHQ6S545 545 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 ZBTB33Q86T24 672 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 BCL11AQ9H165 835 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 SCUBE2Q9NQ36 999 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 SEPT3Q9UH03 358 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 PCDHGA11Q9Y5H2 935 aa5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 DNMT3AQ9Y6K1 912 aaPredicted RBP5.44□□□□□ -1.54
AMBRA1-208ENST00000529558 NR1I2O75469 434 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 DXOO77932 396 aaKnown RBP5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 CANXP27824 592 aaKnown RBP5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 MSS51Q4VC12 460 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 EAPPQ56P03 285 aaPredicted RBP5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 NAALADL2Q58DX5 795 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 SH3BP5LQ7L8J4 393 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 DZIP3Q86Y13 1208 aaKnown RBP5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 RGL4Q8IZJ4 473 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 TPCN2Q8NHX9 752 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 LRCH3Q96II8 777 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 HINFPQ9BQA5 517 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 NUDT12Q9BQG2 462 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 AXIN2Q9Y2T1 843 aa5.43□□□□□ -1.54
AMBRA1-208ENST00000529558 PTCD1O75127 700 aaKnown RBP5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 GIGYF1O75420 1035 aaPredicted RBP5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 WEE1P30291 646 aa5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 MMP16P51512 607 aa5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 TSNAXIP1Q2TAA8 658 aa5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 OXLD1Q5BKU9 147 aa5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 MAMSTRQ6ZN01 415 aa5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 UBXN4Q92575 508 aa5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 BACH2Q9BYV9 841 aa5.42□□□□□ -1.54
AMBRA1-208ENST00000529558 PBX2P40425 430 aa5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 USP4Q13107 963 aa5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 MTMR3Q13615 1198 aa5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 MRPL58Q14197 206 aaKnown RBP5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 SF3A1Q15459 793 aaKnown RBP5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 RNF20Q5VTR2 975 aa5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 CAPN12Q6ZSI9 719 aa5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 FAM160A2Q8N612 972 aaPredicted RBP5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 COL26A1Q96A83 441 aa5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 PCDHB3Q9Y5E6 796 aa5.41□□□□□ -1.54
AMBRA1-208ENST00000529558 M0R2N6 131 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms