RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 NME9Q86XW9 330 aa22.83■■□□□ 1.25
TRIM3-209ENST00000529529 PUS7Q96PZ0 661 aaKnown RBP22.83■■□□□ 1.25
TRIM3-209ENST00000529529 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.25
TRIM3-209ENST00000529529 DDB1Q16531 1140 aa22.82■■□□□ 1.24
TRIM3-209ENST00000529529 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
TRIM3-209ENST00000529529 CD163L1Q9NR16 1453 aa22.8■■□□□ 1.24
TRIM3-209ENST00000529529 TESK2Q96S53 571 aa22.8■■□□□ 1.24
TRIM3-209ENST00000529529 USP31Q70CQ4 1352 aa22.79■■□□□ 1.24
TRIM3-209ENST00000529529 COL18A1P39060 1754 aa22.79■■□□□ 1.24
TRIM3-209ENST00000529529 C11orf95C9JLR9 678 aaPredicted RBP22.79■■□□□ 1.24
TRIM3-209ENST00000529529 R3HDM1Q15032 1099 aaKnown RBP22.79■■□□□ 1.24
TRIM3-209ENST00000529529 CARD10Q9BWT7 1032 aa22.79■■□□□ 1.24
TRIM3-209ENST00000529529 CDCA7Q9BWT1 371 aaPredicted RBP22.78■■□□□ 1.24
TRIM3-209ENST00000529529 SLC24A1O60721 1099 aa22.77■■□□□ 1.24
TRIM3-209ENST00000529529 TNS1Q9HBL0 1735 aaKnown RBP22.77■■□□□ 1.23
TRIM3-209ENST00000529529 NFAT5O94916 1531 aa22.75■■□□□ 1.23
TRIM3-209ENST00000529529 A0A1W2PP64 1363 aa22.75■■□□□ 1.23
TRIM3-209ENST00000529529 MON2Q7Z3U7 1717 aa22.74■■□□□ 1.23
TRIM3-209ENST00000529529 PARP4Q9UKK3 1724 aaKnown RBP22.74■■□□□ 1.23
TRIM3-209ENST00000529529 MARCH10Q8NA82 808 aaPredicted RBP22.74■■□□□ 1.23
TRIM3-209ENST00000529529 PARD3Q8TEW0 1356 aa22.74■■□□□ 1.23
TRIM3-209ENST00000529529 EDC4Q6P2E9 1401 aaKnown RBP22.74■■□□□ 1.23
TRIM3-209ENST00000529529 EXOC5O00471 708 aa22.73■■□□□ 1.23
TRIM3-209ENST00000529529 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
TRIM3-209ENST00000529529 OVOS2A0A0J9YW53 1432 aa22.73■■□□□ 1.23
TRIM3-209ENST00000529529 OVOS2Q6IE36 1432 aa22.73■■□□□ 1.23
TRIM3-209ENST00000529529 NBPF14Q5TI25 921 aa22.71■■□□□ 1.23
TRIM3-209ENST00000529529 NLRP2Q9NX02 1062 aa22.71■■□□□ 1.23
TRIM3-209ENST00000529529 CCDC7Q96M83 1385 aa22.7■■□□□ 1.22
TRIM3-209ENST00000529529 RGPD5Q99666 1765 aa22.69■■□□□ 1.22
TRIM3-209ENST00000529529 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
TRIM3-209ENST00000529529 BCL11BQ9C0K0 894 aaPredicted RBP22.69■■□□□ 1.22
TRIM3-209ENST00000529529 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
TRIM3-209ENST00000529529 TMF1P82094 1093 aa22.68■■□□□ 1.22
TRIM3-209ENST00000529529 PTF1AQ7RTS3 328 aa22.68■■□□□ 1.22
TRIM3-209ENST00000529529 ANKRD24Q8TF21 1146 aa22.68■■□□□ 1.22
TRIM3-209ENST00000529529 ERBB3P21860 1342 aa22.67■■□□□ 1.22
TRIM3-209ENST00000529529 LRRC37A3O60309 1634 aa22.67■■□□□ 1.22
TRIM3-209ENST00000529529 USP47Q96K76 1375 aa22.66■■□□□ 1.22
TRIM3-209ENST00000529529 PLSCR1O15162 318 aa22.66■■□□□ 1.22
TRIM3-209ENST00000529529 COG3Q96JB2 828 aa22.66■■□□□ 1.22
TRIM3-209ENST00000529529 ABCC6O95255 1503 aa22.65■■□□□ 1.22
TRIM3-209ENST00000529529 IP6K1Q92551 441 aa22.64■■□□□ 1.21
TRIM3-209ENST00000529529 TIMELESSQ9UNS1 1208 aa22.64■■□□□ 1.21
TRIM3-209ENST00000529529 PEAK1Q9H792 1746 aa22.64■■□□□ 1.21
TRIM3-209ENST00000529529 USP54Q70EL1 1684 aa22.63■■□□□ 1.21
TRIM3-209ENST00000529529 IL2RBP14784 551 aa22.63■■□□□ 1.21
TRIM3-209ENST00000529529 FBLN1P23142 703 aa22.63■■□□□ 1.21
TRIM3-209ENST00000529529 LTV1Q96GA3 475 aaPredicted RBP22.63■■□□□ 1.21
TRIM3-209ENST00000529529 LRP5O75197 1615 aa22.61■■□□□ 1.21
TRIM3-209ENST00000529529 BCL9O00512 1426 aa22.61■■□□□ 1.21
TRIM3-209ENST00000529529 ANKRD36BQ8N2N9 1353 aa22.61■■□□□ 1.21
TRIM3-209ENST00000529529 CDCA8Q53HL2 280 aa22.6■■□□□ 1.21
TRIM3-209ENST00000529529 AMPHP49418 695 aa22.59■■□□□ 1.21
TRIM3-209ENST00000529529 PROM2Q8N271 834 aa22.59■■□□□ 1.21
TRIM3-209ENST00000529529 WNK3Q9BYP7 1800 aa22.59■■□□□ 1.21
TRIM3-209ENST00000529529 RREB1Q92766 1687 aa22.58■■□□□ 1.21
TRIM3-209ENST00000529529 FYB1O15117 783 aa22.58■■□□□ 1.21
TRIM3-209ENST00000529529 KCNQ2O43526 872 aa22.58■■□□□ 1.21
TRIM3-209ENST00000529529 LTN1O94822 1766 aa22.58■■□□□ 1.2
TRIM3-209ENST00000529529 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
TRIM3-209ENST00000529529 ACSBG1Q96GR2 724 aa22.57■■□□□ 1.2
TRIM3-209ENST00000529529 GGNBP2Q9H3C7 697 aa22.57■■□□□ 1.2
TRIM3-209ENST00000529529 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
TRIM3-209ENST00000529529 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
TRIM3-209ENST00000529529 HOXC9P31274 260 aa22.56■■□□□ 1.2
TRIM3-209ENST00000529529 SBF2Q86WG5 1849 aa22.56■■□□□ 1.2
TRIM3-209ENST00000529529 NUP188Q5SRE5 1749 aa22.56■■□□□ 1.2
TRIM3-209ENST00000529529 TXNRD1Q16881 649 aa22.54■■□□□ 1.2
TRIM3-209ENST00000529529 RRS1Q15050 365 aaKnown RBP22.53■■□□□ 1.2
TRIM3-209ENST00000529529 DDX54Q8TDD1 881 aaKnown RBP22.53■■□□□ 1.2
TRIM3-209ENST00000529529 ANO8Q9HCE9 1232 aaPredicted RBP22.52■■□□□ 1.2
TRIM3-209ENST00000529529 SPON1Q9HCB6 807 aa22.51■■□□□ 1.19
TRIM3-209ENST00000529529 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
TRIM3-209ENST00000529529 STK32BQ9NY57 414 aa22.48■■□□□ 1.19
TRIM3-209ENST00000529529 RGPD3A6NKT7 1758 aaPredicted RBP22.47■■□□□ 1.19
TRIM3-209ENST00000529529 RGPD4Q7Z3J3 1758 aa22.47■■□□□ 1.19
TRIM3-209ENST00000529529 NBPF6Q5VWK0 638 aa22.46■■□□□ 1.19
TRIM3-209ENST00000529529 ZCRB1Q8TBF4 217 aaKnown RBP22.46■■□□□ 1.19
TRIM3-209ENST00000529529 CCER1Q8TC90 406 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-209ENST00000529529 NBPF4Q96M43 638 aa22.46■■□□□ 1.19
TRIM3-209ENST00000529529 PDGFDQ9GZP0 370 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-209ENST00000529529 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-209ENST00000529529 SLC15A2Q16348 729 aa22.45■■□□□ 1.18
TRIM3-209ENST00000529529 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.18
TRIM3-209ENST00000529529 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
TRIM3-209ENST00000529529 RTL1A6NKG5 1358 aa22.44■■□□□ 1.18
TRIM3-209ENST00000529529 USHBP1Q8N6Y0 703 aa22.43■■□□□ 1.18
TRIM3-209ENST00000529529 ZBTB7AO95365 584 aa22.41■■□□□ 1.18
TRIM3-209ENST00000529529 PRIM1P49642 420 aaKnown RBP22.41■■□□□ 1.18
TRIM3-209ENST00000529529 SYTL4Q96C24 671 aaPredicted RBP22.41■■□□□ 1.18
TRIM3-209ENST00000529529 NHSQ6T4R5 1651 aa22.41■■□□□ 1.18
TRIM3-209ENST00000529529 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
TRIM3-209ENST00000529529 FAM208AQ9UK61 1670 aaKnown RBP22.4■■□□□ 1.18
TRIM3-209ENST00000529529 RAPGEF4Q8WZA2 1011 aa22.4■■□□□ 1.18
TRIM3-209ENST00000529529 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
TRIM3-209ENST00000529529 INSRP06213 1382 aa22.39■■□□□ 1.18
TRIM3-209ENST00000529529 EIF4G2P78344 907 aaKnown RBP eCLIP22.39■■□□□ 1.17
TRIM3-209ENST00000529529 ATF5Q9Y2D1 282 aaPredicted RBP22.39■■□□□ 1.17
TRIM3-209ENST00000529529 PPM1GO15355 546 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms