RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 FAM193AP78312 1265 aa11.25□□□□□ -0.61
CAPRIN1-206ENST00000528948 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
CAPRIN1-206ENST00000528948 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
CAPRIN1-206ENST00000528948 FBXW7Q969H0 707 aa11.25□□□□□ -0.61
CAPRIN1-206ENST00000528948 KDM2AQ9Y2K7 1162 aa11.25□□□□□ -0.61
CAPRIN1-206ENST00000528948 ERBB4Q15303 1308 aa11.25□□□□□ -0.61
CAPRIN1-206ENST00000528948 UQCRHLA0A096LP55 91 aa11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 UQCRHP07919 91 aa11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 DDIT3P35638 169 aa11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 RIPK4P57078 832 aa11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 SYNMO15061 1565 aa11.24□□□□□ -0.61
CAPRIN1-206ENST00000528948 ARHGAP33O14559 1287 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 PDLIM2Q96JY6 352 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 FAM13BQ9NYF5 915 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 PRAG1Q86YV5 1406 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 ADCY10Q96PN6 1610 aa11.23□□□□□ -0.61
CAPRIN1-206ENST00000528948 SHROOM2Q13796 1616 aa11.22□□□□□ -0.61
CAPRIN1-206ENST00000528948 ABCC10Q5T3U5 1492 aa11.22□□□□□ -0.61
CAPRIN1-206ENST00000528948 CREBRFQ8IUR6 639 aa11.22□□□□□ -0.61
CAPRIN1-206ENST00000528948 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
CAPRIN1-206ENST00000528948 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
CAPRIN1-206ENST00000528948 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
CAPRIN1-206ENST00000528948 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
CAPRIN1-206ENST00000528948 IQGAP2Q13576 1575 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 CCDC141Q6ZP82 1450 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 FANCD2Q9BXW9 1451 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 ANKRD50Q9ULJ7 1429 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 NUCB2P80303 420 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 TAF7LQ5H9L4 462 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
CAPRIN1-206ENST00000528948 KANK1Q14678 1352 aa11.2□□□□□ -0.62
CAPRIN1-206ENST00000528948 R3HCC1Q9Y3T6 440 aaKnown RBP11.2□□□□□ -0.62
CAPRIN1-206ENST00000528948 KNSTRNQ9Y448 316 aa11.2□□□□□ -0.62
CAPRIN1-206ENST00000528948 ASXL1Q8IXJ9 1541 aa11.19□□□□□ -0.62
CAPRIN1-206ENST00000528948 RTEL1-TNFRSF6BF6WH68 1400 aa11.19□□□□□ -0.62
CAPRIN1-206ENST00000528948 PTPREP23469 700 aa11.19□□□□□ -0.62
CAPRIN1-206ENST00000528948 PDCL2Q8N4E4 241 aa11.19□□□□□ -0.62
CAPRIN1-206ENST00000528948 MYRIPQ8NFW9 859 aa11.19□□□□□ -0.62
CAPRIN1-206ENST00000528948 TSPYL1Q9H0U9 437 aa11.19□□□□□ -0.62
CAPRIN1-206ENST00000528948 ADAMTS8Q9UP79 889 aa11.19□□□□□ -0.62
CAPRIN1-206ENST00000528948 A0A0U1RQG5 324 aaPredicted RBP11.18□□□□□ -0.62
CAPRIN1-206ENST00000528948 IGHDP01880 384 aa11.18□□□□□ -0.62
CAPRIN1-206ENST00000528948 IPO4Q8TEX9 1081 aaKnown RBP11.18□□□□□ -0.62
CAPRIN1-206ENST00000528948 TNPO1Q92973 898 aaKnown RBP11.18□□□□□ -0.62
CAPRIN1-206ENST00000528948 FEZ1Q99689 392 aa11.18□□□□□ -0.62
CAPRIN1-206ENST00000528948 CWC22Q9HCG8 908 aaKnown RBP11.18□□□□□ -0.62
CAPRIN1-206ENST00000528948 GRIN2AQ12879 1464 aa11.18□□□□□ -0.62
CAPRIN1-206ENST00000528948 TPM3P06753 285 aa11.17□□□□□ -0.62
CAPRIN1-206ENST00000528948 PDIA4P13667 645 aaKnown RBP11.17□□□□□ -0.62
CAPRIN1-206ENST00000528948 SLC20A2Q08357 652 aa11.17□□□□□ -0.62
CAPRIN1-206ENST00000528948 KIAA2012Q0VF49 1180 aa11.17□□□□□ -0.62
CAPRIN1-206ENST00000528948 HDAC1Q13547 482 aaPredicted RBP11.17□□□□□ -0.62
CAPRIN1-206ENST00000528948 DDX12PQ92771 950 aa11.17□□□□□ -0.62
CAPRIN1-206ENST00000528948 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 CCDC66A2RUB6 948 aa11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 PPP2R1AP30153 589 aa11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 LSM11P83369 360 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 SYAP1Q96A49 352 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 PANK3Q9H999 370 aa11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 DDX49Q9Y6V7 483 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 TROQ12816 1431 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 RNF17Q9BXT8 1623 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-206ENST00000528948 MBD3O95983 291 aa11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 ZSCAN20P17040 1043 aaPredicted RBP11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 SKAP1Q86WV1 359 aa11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 WDR63Q8IWG1 891 aa11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 FAM184AQ8NB25 1140 aa11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 ARXQ96QS3 562 aa11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 DIAPH3Q9NSV4 1193 aa11.15□□□□□ -0.62
CAPRIN1-206ENST00000528948 FAM135AQ9P2D6 1515 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 K7ELQ4 463 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 GABPB1Q06547 395 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 CHAF1AQ13111 956 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 SYCP1Q15431 976 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 UVSSAQ2YD98 709 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 NBPF1Q3BBV0 1214 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 KCNK17Q96T54 332 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 KIF3AQ9Y496 699 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 NUP155O75694 1391 aa11.14□□□□□ -0.63
CAPRIN1-206ENST00000528948 SYNJ2O15056 1496 aa11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 ARHGEF5Q12774 1597 aa11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 TK2O00142 265 aa11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 CDK11BP21127 795 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 RSPH4AQ5TD94 716 aa11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 GAS2L3Q86XJ1 694 aa11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
CAPRIN1-206ENST00000528948 ATP10AO60312 1499 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms