RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
SSBP3-212ENST00000528930 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
SSBP3-212ENST00000528930 ANKRD50Q9ULJ7 1429 aa12.88□□□□□ -0.35
SSBP3-212ENST00000528930 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
SSBP3-212ENST00000528930 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
SSBP3-212ENST00000528930 ROCK1Q13464 1354 aa12.88□□□□□ -0.35
SSBP3-212ENST00000528930 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
SSBP3-212ENST00000528930 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
SSBP3-212ENST00000528930 RGPD8O14715 1765 aaPredicted RBP12.87□□□□□ -0.35
SSBP3-212ENST00000528930 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
SSBP3-212ENST00000528930 PLCG2P16885 1265 aa12.86□□□□□ -0.35
SSBP3-212ENST00000528930 ITGAEP38570 1179 aa12.86□□□□□ -0.35
SSBP3-212ENST00000528930 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-212ENST00000528930 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-212ENST00000528930 HFM1A2PYH4 1435 aa12.86□□□□□ -0.35
SSBP3-212ENST00000528930 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
SSBP3-212ENST00000528930 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
SSBP3-212ENST00000528930 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
SSBP3-212ENST00000528930 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
SSBP3-212ENST00000528930 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
SSBP3-212ENST00000528930 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
SSBP3-212ENST00000528930 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-212ENST00000528930 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
SSBP3-212ENST00000528930 TNS4Q8IZW8 715 aa12.83□□□□□ -0.36
SSBP3-212ENST00000528930 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.36
SSBP3-212ENST00000528930 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
SSBP3-212ENST00000528930 ST18O60284 1047 aa12.82□□□□□ -0.36
SSBP3-212ENST00000528930 ALS2Q96Q42 1657 aa12.81□□□□□ -0.36
SSBP3-212ENST00000528930 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-212ENST00000528930 TRPM3Q9HCF6 1732 aaPredicted RBP12.81□□□□□ -0.36
SSBP3-212ENST00000528930 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
SSBP3-212ENST00000528930 IFT172Q9UG01 1749 aa12.8□□□□□ -0.36
SSBP3-212ENST00000528930 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
SSBP3-212ENST00000528930 GPR162Q16538 588 aa12.79□□□□□ -0.36
SSBP3-212ENST00000528930 GOLGB1Q14789 3259 aaKnown RBP12.79□□□□□ -0.36
SSBP3-212ENST00000528930 NAIPQ13075 1403 aa12.79□□□□□ -0.36
SSBP3-212ENST00000528930 SBNO1A3KN83 1393 aa12.78□□□□□ -0.36
SSBP3-212ENST00000528930 ARHGEF10O15013 1369 aa12.78□□□□□ -0.36
SSBP3-212ENST00000528930 ADCY9O60503 1353 aa12.78□□□□□ -0.36
SSBP3-212ENST00000528930 APLP1P51693 650 aa12.77□□□□□ -0.37
SSBP3-212ENST00000528930 MTFR1LQ9H019 292 aa12.77□□□□□ -0.37
SSBP3-212ENST00000528930 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.37
SSBP3-212ENST00000528930 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
SSBP3-212ENST00000528930 PLSCR1O15162 318 aa12.75□□□□□ -0.37
SSBP3-212ENST00000528930 NUP155O75694 1391 aa12.75□□□□□ -0.37
SSBP3-212ENST00000528930 KNDC1Q76NI1 1749 aa12.75□□□□□ -0.37
SSBP3-212ENST00000528930 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
SSBP3-212ENST00000528930 TOPAZ1Q8N9V7 1692 aa12.74□□□□□ -0.37
SSBP3-212ENST00000528930 ARXQ96QS3 562 aa12.74□□□□□ -0.37
SSBP3-212ENST00000528930 GPBP1L1Q9HC44 474 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-212ENST00000528930 KIF1BO60333 1816 aa12.74□□□□□ -0.37
SSBP3-212ENST00000528930 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
SSBP3-212ENST00000528930 NRXN1Q9ULB1 1477 aa12.73□□□□□ -0.37
SSBP3-212ENST00000528930 TECPR2O15040 1411 aa12.73□□□□□ -0.37
SSBP3-212ENST00000528930 JMYQ8N9B5 988 aa12.73□□□□□ -0.37
SSBP3-212ENST00000528930 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
SSBP3-212ENST00000528930 ARHGEF28Q8N1W1 1705 aaKnown RBP12.72□□□□□ -0.37
SSBP3-212ENST00000528930 AATKQ6ZMQ8 1374 aa12.71□□□□□ -0.37
SSBP3-212ENST00000528930 CLTCL1P53675 1640 aa12.7□□□□□ -0.38
SSBP3-212ENST00000528930 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
SSBP3-212ENST00000528930 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
SSBP3-212ENST00000528930 PHRF1Q9P1Y6 1649 aaKnown RBP12.7□□□□□ -0.38
SSBP3-212ENST00000528930 AKAP12Q02952 1782 aa12.69□□□□□ -0.38
SSBP3-212ENST00000528930 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
SSBP3-212ENST00000528930 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
SSBP3-212ENST00000528930 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
SSBP3-212ENST00000528930 WNK3Q9BYP7 1800 aa12.69□□□□□ -0.38
SSBP3-212ENST00000528930 PPLO60437 1756 aa12.69□□□□□ -0.38
SSBP3-212ENST00000528930 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
SSBP3-212ENST00000528930 PSME1Q06323 249 aa12.68□□□□□ -0.38
SSBP3-212ENST00000528930 ATP7BP35670 1465 aa12.67□□□□□ -0.38
SSBP3-212ENST00000528930 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-212ENST00000528930 KIF3CO14782 793 aa12.67□□□□□ -0.38
SSBP3-212ENST00000528930 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
SSBP3-212ENST00000528930 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
SSBP3-212ENST00000528930 WWC3Q9ULE0 1092 aa12.67□□□□□ -0.38
SSBP3-212ENST00000528930 OVOS2A0A0G2JMS6 1433 aa12.67□□□□□ -0.38
SSBP3-212ENST00000528930 OVOS2A0A0J9YW53 1432 aa12.67□□□□□ -0.38
SSBP3-212ENST00000528930 OVOS2Q6IE36 1432 aa12.67□□□□□ -0.38
SSBP3-212ENST00000528930 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
SSBP3-212ENST00000528930 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
SSBP3-212ENST00000528930 YBX3P16989 372 aaKnown RBP eCLIP12.66□□□□□ -0.38
SSBP3-212ENST00000528930 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
SSBP3-212ENST00000528930 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
SSBP3-212ENST00000528930 LMO7Q8WWI1 1683 aa12.65□□□□□ -0.38
SSBP3-212ENST00000528930 STK32BQ9NY57 414 aa12.65□□□□□ -0.38
SSBP3-212ENST00000528930 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
SSBP3-212ENST00000528930 KIAA1210Q9ULL0 1709 aa12.65□□□□□ -0.38
SSBP3-212ENST00000528930 TUBGCP6Q96RT7 1819 aa12.65□□□□□ -0.39
SSBP3-212ENST00000528930 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
SSBP3-212ENST00000528930 MARVELD3Q96A59 401 aa12.64□□□□□ -0.39
SSBP3-212ENST00000528930 SSH2Q76I76 1423 aa12.63□□□□□ -0.39
SSBP3-212ENST00000528930 VASPP50552 380 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-212ENST00000528930 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
SSBP3-212ENST00000528930 TULP4Q9NRJ4 1543 aa12.62□□□□□ -0.39
SSBP3-212ENST00000528930 LMOD2Q6P5Q4 547 aa12.62□□□□□ -0.39
SSBP3-212ENST00000528930 PCNTO95613 3336 aa12.62□□□□□ -0.39
SSBP3-212ENST00000528930 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
SSBP3-212ENST00000528930 NLGN2Q8NFZ4 835 aa12.61□□□□□ -0.39
SSBP3-212ENST00000528930 ZNF526Q8TF50 670 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms