RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
UBXN1-209ENST00000528907 RALBP1Q15311 655 aa19.56■□□□□ 0.72
UBXN1-209ENST00000528907 POLKQ9UBT6 870 aa19.56■□□□□ 0.72
UBXN1-209ENST00000528907 RGPD5Q99666 1765 aa19.56■□□□□ 0.72
UBXN1-209ENST00000528907 AFF2P51816 1311 aa19.55■□□□□ 0.72
UBXN1-209ENST00000528907 IP6K1Q92551 441 aa19.55■□□□□ 0.72
UBXN1-209ENST00000528907 BCL9LQ86UU0 1499 aa19.54■□□□□ 0.72
UBXN1-209ENST00000528907 SOX12O15370 315 aa19.54■□□□□ 0.72
UBXN1-209ENST00000528907 NGLY1Q96IV0 654 aa19.54■□□□□ 0.72
UBXN1-209ENST00000528907 C8orf37Q96NL8 207 aa19.54■□□□□ 0.72
UBXN1-209ENST00000528907 FAM208AQ9UK61 1670 aaKnown RBP19.54■□□□□ 0.72
UBXN1-209ENST00000528907 FLT4P35916 1363 aa19.54■□□□□ 0.72
UBXN1-209ENST00000528907 COL5A2P05997 1499 aaPredicted RBP19.54■□□□□ 0.72
UBXN1-209ENST00000528907 SRCAPQ6ZRS2 3230 aa19.53■□□□□ 0.72
UBXN1-209ENST00000528907 FBLN1P23142 703 aa19.53■□□□□ 0.72
UBXN1-209ENST00000528907 RRS1Q15050 365 aaKnown RBP19.53■□□□□ 0.72
UBXN1-209ENST00000528907 HOXC9P31274 260 aa19.52■□□□□ 0.72
UBXN1-209ENST00000528907 CHRNA2Q15822 529 aa19.52■□□□□ 0.72
UBXN1-209ENST00000528907 INSRP06213 1382 aa19.52■□□□□ 0.72
UBXN1-209ENST00000528907 UNC5CLQ8IV45 518 aa19.51■□□□□ 0.71
UBXN1-209ENST00000528907 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
UBXN1-209ENST00000528907 BTG4Q9NY30 223 aa19.51■□□□□ 0.71
UBXN1-209ENST00000528907 AXIN2Q9Y2T1 843 aa19.51■□□□□ 0.71
UBXN1-209ENST00000528907 EMILIN1Q9Y6C2 1016 aa19.51■□□□□ 0.71
UBXN1-209ENST00000528907 RGS12O14924 1447 aa19.51■□□□□ 0.71
UBXN1-209ENST00000528907 TNNT2P45379 298 aaPredicted RBP19.5■□□□□ 0.71
UBXN1-209ENST00000528907 AMPHP49418 695 aa19.5■□□□□ 0.71
UBXN1-209ENST00000528907 PPP2R1AP30153 589 aa19.49■□□□□ 0.71
UBXN1-209ENST00000528907 RBM6P78332 1123 aaKnown RBP19.49■□□□□ 0.71
UBXN1-209ENST00000528907 USP21Q9UK80 565 aa19.49■□□□□ 0.71
UBXN1-209ENST00000528907 ATRNO75882 1429 aa19.48■□□□□ 0.71
UBXN1-209ENST00000528907 ERBB3P21860 1342 aa19.48■□□□□ 0.71
UBXN1-209ENST00000528907 MTHFSP49914 203 aa19.47■□□□□ 0.71
UBXN1-209ENST00000528907 QTRT2Q9H974 415 aaKnown RBP19.47■□□□□ 0.71
UBXN1-209ENST00000528907 WDR17Q8IZU2 1322 aa19.47■□□□□ 0.71
UBXN1-209ENST00000528907 MYBBP1AQ9BQG0 1328 aaKnown RBP19.47■□□□□ 0.71
UBXN1-209ENST00000528907 ZBTB7CA1YPR0 619 aa19.46■□□□□ 0.71
UBXN1-209ENST00000528907 VPS72Q15906 364 aa19.46■□□□□ 0.71
UBXN1-209ENST00000528907 CRB1P82279 1406 aa19.45■□□□□ 0.7
UBXN1-209ENST00000528907 HSP90AB2PQ58FF8 381 aa19.45■□□□□ 0.7
UBXN1-209ENST00000528907 TRPC5Q9UL62 973 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-209ENST00000528907 COL3A1P02461 1466 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-209ENST00000528907 ANP32CO43423 234 aa19.44■□□□□ 0.7
UBXN1-209ENST00000528907 ANKRD24Q8TF21 1146 aa19.44■□□□□ 0.7
UBXN1-209ENST00000528907 EVA1CP58658 441 aa19.43■□□□□ 0.7
UBXN1-209ENST00000528907 CNGB1Q14028 1251 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-209ENST00000528907 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
UBXN1-209ENST00000528907 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
UBXN1-209ENST00000528907 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
UBXN1-209ENST00000528907 SPATA31A5Q5VU36 1347 aa19.42■□□□□ 0.7
UBXN1-209ENST00000528907 SPATA31A7Q8IWB4 1347 aa19.42■□□□□ 0.7
UBXN1-209ENST00000528907 GLI3P10071 1580 aa19.41■□□□□ 0.7
UBXN1-209ENST00000528907 LARP1Q6PKG0 1096 aaKnown RBP19.41■□□□□ 0.7
UBXN1-209ENST00000528907 CARD10Q9BWT7 1032 aa19.41■□□□□ 0.7
UBXN1-209ENST00000528907 RGPD2P0DJD1 1756 aa19.41■□□□□ 0.7
UBXN1-209ENST00000528907 WNK3Q9BYP7 1800 aa19.41■□□□□ 0.7
UBXN1-209ENST00000528907 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
UBXN1-209ENST00000528907 STRN4Q9NRL3 753 aa19.4■□□□□ 0.7
UBXN1-209ENST00000528907 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
UBXN1-209ENST00000528907 SPATA31A1Q5TZJ5 1347 aa19.4■□□□□ 0.7
UBXN1-209ENST00000528907 IL13P35225 146 aa19.39■□□□□ 0.69
UBXN1-209ENST00000528907 EIF4A2Q14240 407 aaKnown RBP19.39■□□□□ 0.69
UBXN1-209ENST00000528907 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-209ENST00000528907 ONECUT3O60422 494 aaPredicted RBP19.37■□□□□ 0.69
UBXN1-209ENST00000528907 CSB-PGBD3P0DP91 1061 aa19.37■□□□□ 0.69
UBXN1-209ENST00000528907 DIEXFQ68CQ4 756 aaKnown RBP19.37■□□□□ 0.69
UBXN1-209ENST00000528907 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
UBXN1-209ENST00000528907 TOM1L2Q6ZVM7 507 aa19.37■□□□□ 0.69
UBXN1-209ENST00000528907 PLEKHG2Q9H7P9 1386 aa19.36■□□□□ 0.69
UBXN1-209ENST00000528907 IGSF1Q8N6C5 1336 aa19.36■□□□□ 0.69
UBXN1-209ENST00000528907 DIAPH1O60610 1272 aaKnown RBP19.36■□□□□ 0.69
UBXN1-209ENST00000528907 THSD7AQ9UPZ6 1657 aa19.36■□□□□ 0.69
UBXN1-209ENST00000528907 NBPF6Q5VWK0 638 aa19.35■□□□□ 0.69
UBXN1-209ENST00000528907 TCP11L2Q8N4U5 519 aa19.35■□□□□ 0.69
UBXN1-209ENST00000528907 LTV1Q96GA3 475 aaPredicted RBP19.35■□□□□ 0.69
UBXN1-209ENST00000528907 NBPF4Q96M43 638 aa19.35■□□□□ 0.69
UBXN1-209ENST00000528907 DISP2A7MBM2 1401 aa19.34■□□□□ 0.69
UBXN1-209ENST00000528907 PARP4Q9UKK3 1724 aaKnown RBP19.34■□□□□ 0.69
UBXN1-209ENST00000528907 EYA1Q99502 592 aa19.34■□□□□ 0.69
UBXN1-209ENST00000528907 KDRP35968 1356 aa19.33■□□□□ 0.69
UBXN1-209ENST00000528907 CDCA7Q9BWT1 371 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-209ENST00000528907 NLRP2Q9NX02 1062 aa19.33■□□□□ 0.68
UBXN1-209ENST00000528907 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
UBXN1-209ENST00000528907 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
UBXN1-209ENST00000528907 CCDC125Q86Z20 511 aa19.29■□□□□ 0.68
UBXN1-209ENST00000528907 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
UBXN1-209ENST00000528907 PKD1L3Q7Z443 1732 aa19.28■□□□□ 0.68
UBXN1-209ENST00000528907 IL2RBP14784 551 aa19.27■□□□□ 0.68
UBXN1-209ENST00000528907 USP35Q9P2H5 1018 aa19.27■□□□□ 0.68
UBXN1-209ENST00000528907 OVOS2A0A0G2JMS6 1433 aa19.26■□□□□ 0.67
UBXN1-209ENST00000528907 MEGF6O75095 1541 aa19.26■□□□□ 0.67
UBXN1-209ENST00000528907 CCER2I3L3R5 266 aa19.26■□□□□ 0.67
UBXN1-209ENST00000528907 FAM98CQ17RN3 349 aaKnown RBP19.26■□□□□ 0.67
UBXN1-209ENST00000528907 EP400Q96L91 3159 aa19.25■□□□□ 0.67
UBXN1-209ENST00000528907 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
UBXN1-209ENST00000528907 SHANK3Q9BYB0 1731 aa19.25■□□□□ 0.67
UBXN1-209ENST00000528907 USHBP1Q8N6Y0 703 aa19.24■□□□□ 0.67
UBXN1-209ENST00000528907 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
UBXN1-209ENST00000528907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
UBXN1-209ENST00000528907 TNS2Q63HR2 1409 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms