RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	UNC5CL	Q8IV45	518 aa		10.7	□□□□□ -0.7
MS4A6A-208	ENST00000528851	POLR3GL	Q9BT43	218 aa		10.7	□□□□□ -0.7
MS4A6A-208	ENST00000528851	ALS2	Q96Q42	1657 aa		10.7	□□□□□ -0.7
MS4A6A-208	ENST00000528851	ZC3H6	P61129	1189 aa	Known RBP	10.7	□□□□□ -0.7
MS4A6A-208	ENST00000528851	NME9	Q86XW9	330 aa		10.7	□□□□□ -0.7
MS4A6A-208	ENST00000528851	CARD14	Q9BXL6	1004 aa		10.7	□□□□□ -0.7
MS4A6A-208	ENST00000528851	PRDM11	Q9NQV5	511 aa		10.7	□□□□□ -0.7
MS4A6A-208	ENST00000528851	FYB1	O15117	783 aa		10.69	□□□□□ -0.7
MS4A6A-208	ENST00000528851	RXRB	P28702	533 aa		10.69	□□□□□ -0.7
MS4A6A-208	ENST00000528851	CPD	O75976	1380 aa		10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	RBM6	P78332	1123 aa	Known RBP	10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	COG3	Q96JB2	828 aa		10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	KIF7	Q2M1P5	1343 aa		10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	ARHGEF25	Q86VW2	580 aa		10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	PANK3	Q9H999	370 aa		10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	BTG4	Q9NY30	223 aa		10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	ZRANB1	Q9UGI0	708 aa		10.68	□□□□□ -0.7
MS4A6A-208	ENST00000528851	SLIT2	O94813	1529 aa		10.67	□□□□□ -0.7
MS4A6A-208	ENST00000528851	VPS72	Q15906	364 aa		10.67	□□□□□ -0.7
MS4A6A-208	ENST00000528851	BCL9L	Q86UU0	1499 aa		10.66	□□□□□ -0.7
MS4A6A-208	ENST00000528851	KIAA0232	Q92628	1395 aa		10.66	□□□□□ -0.7
MS4A6A-208	ENST00000528851	ILDR2	Q71H61	639 aa		10.66	□□□□□ -0.7
MS4A6A-208	ENST00000528851	GJD4	Q96KN9	370 aa	Predicted RBP	10.66	□□□□□ -0.7
MS4A6A-208	ENST00000528851	AKAP12	Q02952	1782 aa		10.66	□□□□□ -0.7
MS4A6A-208	ENST00000528851	EVA1C	P58658	441 aa		10.65	□□□□□ -0.7
MS4A6A-208	ENST00000528851	CHRNA2	Q15822	529 aa		10.65	□□□□□ -0.7
MS4A6A-208	ENST00000528851	AATK	Q6ZMQ8	1374 aa		10.65	□□□□□ -0.7
MS4A6A-208	ENST00000528851	CGNL1	Q0VF96	1302 aa		10.65	□□□□□ -0.7
MS4A6A-208	ENST00000528851	GGNBP2	Q9H3C7	697 aa		10.65	□□□□□ -0.71
MS4A6A-208	ENST00000528851	SLIT3	O75094	1523 aa		10.64	□□□□□ -0.71
MS4A6A-208	ENST00000528851	WASHC2A	Q641Q2	1341 aa		10.64	□□□□□ -0.71
MS4A6A-208	ENST00000528851	ONECUT3	O60422	494 aa	Predicted RBP	10.64	□□□□□ -0.71
MS4A6A-208	ENST00000528851	KNSTRN	Q9Y448	316 aa		10.64	□□□□□ -0.71
MS4A6A-208	ENST00000528851	ATRN	O75882	1429 aa		10.64	□□□□□ -0.71
MS4A6A-208	ENST00000528851	MON2	Q7Z3U7	1717 aa		10.64	□□□□□ -0.71
MS4A6A-208	ENST00000528851	CCDC7	Q96M83	1385 aa		10.64	□□□□□ -0.71
MS4A6A-208	ENST00000528851	PCDH10	Q9P2E7	1040 aa		10.63	□□□□□ -0.71
MS4A6A-208	ENST00000528851	OVOS2	A0A0J9YW53	1432 aa		10.63	□□□□□ -0.71
MS4A6A-208	ENST00000528851	OVOS2	Q6IE36	1432 aa		10.63	□□□□□ -0.71
MS4A6A-208	ENST00000528851	NSD3	Q9BZ95	1437 aa		10.63	□□□□□ -0.71
MS4A6A-208	ENST00000528851	PER1	O15534	1290 aa	Predicted RBP	10.63	□□□□□ -0.71
MS4A6A-208	ENST00000528851	ZBTB7C	A1YPR0	619 aa		10.62	□□□□□ -0.71
MS4A6A-208	ENST00000528851	SOX12	O15370	315 aa		10.62	□□□□□ -0.71
MS4A6A-208	ENST00000528851	CCDC9	Q9Y3X0	531 aa	Known RBP	10.62	□□□□□ -0.71
MS4A6A-208	ENST00000528851	NRK	Q7Z2Y5	1582 aa		10.62	□□□□□ -0.71
MS4A6A-208	ENST00000528851	PIK3C2A	O00443	1686 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	IP6K1	Q92551	441 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	STRN4	Q9NRL3	753 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	AXIN2	Q9Y2T1	843 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	COL14A1	Q05707	1796 aa	Known RBP	10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	SPATA31A5	Q5VU36	1347 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	SPATA31A7	Q8IWB4	1347 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	MARF1	Q9Y4F3	1742 aa	Known RBP	10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	CRYBG1	Q9Y4K1	1723 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	OTUD5	Q96G74	571 aa		10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	THRAP3	Q9Y2W1	955 aa	Known RBP	10.61	□□□□□ -0.71
MS4A6A-208	ENST00000528851	NSD2	O96028	1365 aa		10.6	□□□□□ -0.71
MS4A6A-208	ENST00000528851	ABCA3	Q99758	1704 aa		10.6	□□□□□ -0.71
MS4A6A-208	ENST00000528851	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.6	□□□□□ -0.71
MS4A6A-208	ENST00000528851	SPATA31A1	Q5TZJ5	1347 aa		10.59	□□□□□ -0.71
MS4A6A-208	ENST00000528851	AMPH	P49418	695 aa		10.59	□□□□□ -0.71
MS4A6A-208	ENST00000528851	BARGIN	Q6ZT62	677 aa		10.59	□□□□□ -0.71
MS4A6A-208	ENST00000528851	MAP3K19	Q56UN5	1328 aa		10.59	□□□□□ -0.71
MS4A6A-208	ENST00000528851	CAMTA1	Q9Y6Y1	1673 aa		10.59	□□□□□ -0.71
MS4A6A-208	ENST00000528851	FBLN1	P23142	703 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	LARP1	Q6PKG0	1096 aa	Known RBP	10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	USP54	Q70EL1	1684 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	WDR17	Q8IZU2	1322 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	NWD2	Q9ULI1	1742 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	KIF24	Q5T7B8	1368 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	MYOM1	P52179	1685 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	TOM1L2	Q6ZVM7	507 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	MORC1	Q86VD1	984 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	TCP11L2	Q8N4U5	519 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	CARD10	Q9BWT7	1032 aa		10.58	□□□□□ -0.72
MS4A6A-208	ENST00000528851	NFAT5	O94916	1531 aa		10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	POTEM	A6NI47	508 aa		10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	SOCS7	O14512	581 aa		10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	CSB-PGBD3	P0DP91	1061 aa		10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	HOXC9	P31274	260 aa		10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	SEPT12	Q8IYM1	358 aa		10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	NPC1L1	Q9UHC9	1359 aa		10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.57	□□□□□ -0.72
MS4A6A-208	ENST00000528851	RRS1	Q15050	365 aa	Known RBP	10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	ANKRD24	Q8TF21	1146 aa		10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	POLK	Q9UBT6	870 aa		10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	ABCC6	O95255	1503 aa		10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	BLM	P54132	1417 aa	Predicted RBP	10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	CRB1	P82279	1406 aa		10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	FAM98C	Q17RN3	349 aa	Known RBP	10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	COL5A2	P05997	1499 aa	Predicted RBP	10.56	□□□□□ -0.72
MS4A6A-208	ENST00000528851	USP35	Q9P2H5	1018 aa		10.55	□□□□□ -0.72
MS4A6A-208	ENST00000528851	ERBB3	P21860	1342 aa		10.55	□□□□□ -0.72
MS4A6A-208	ENST00000528851	RTL1	A6NKG5	1358 aa		10.55	□□□□□ -0.72
MS4A6A-208	ENST00000528851	PLCH1	Q4KWH8	1693 aa		10.55	□□□□□ -0.72
MS4A6A-208	ENST00000528851	LMO7	Q8WWI1	1683 aa		10.55	□□□□□ -0.72
MS4A6A-208	ENST00000528851	INSR	P06213	1382 aa		10.54	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms