RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
SCN3B-205ENST00000528267 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
SCN3B-205ENST00000528267 RGPD2P0DJD1 1756 aa17.71■□□□□ 0.43
SCN3B-205ENST00000528267 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.43
SCN3B-205ENST00000528267 NSD2O96028 1365 aa17.7■□□□□ 0.42
SCN3B-205ENST00000528267 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
SCN3B-205ENST00000528267 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
SCN3B-205ENST00000528267 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
SCN3B-205ENST00000528267 RGS12O14924 1447 aa17.68■□□□□ 0.42
SCN3B-205ENST00000528267 VPS72Q15906 364 aa17.68■□□□□ 0.42
SCN3B-205ENST00000528267 TRPC5Q9UL62 973 aaPredicted RBP17.68■□□□□ 0.42
SCN3B-205ENST00000528267 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
SCN3B-205ENST00000528267 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
SCN3B-205ENST00000528267 EMILIN1Q9Y6C2 1016 aa17.67■□□□□ 0.42
SCN3B-205ENST00000528267 BRWD3Q6RI45 1802 aa17.67■□□□□ 0.42
SCN3B-205ENST00000528267 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
SCN3B-205ENST00000528267 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
SCN3B-205ENST00000528267 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
SCN3B-205ENST00000528267 FAM208AQ9UK61 1670 aaKnown RBP17.66■□□□□ 0.42
SCN3B-205ENST00000528267 HOXC9P31274 260 aa17.65■□□□□ 0.42
SCN3B-205ENST00000528267 TNNT2P45379 298 aaPredicted RBP17.65■□□□□ 0.42
SCN3B-205ENST00000528267 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
SCN3B-205ENST00000528267 GJD4Q96KN9 370 aaPredicted RBP17.65■□□□□ 0.42
SCN3B-205ENST00000528267 SPATA31A5Q5VU36 1347 aa17.65■□□□□ 0.42
SCN3B-205ENST00000528267 SPATA31A7Q8IWB4 1347 aa17.65■□□□□ 0.42
SCN3B-205ENST00000528267 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.42
SCN3B-205ENST00000528267 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
SCN3B-205ENST00000528267 IP6K1Q92551 441 aa17.64■□□□□ 0.41
SCN3B-205ENST00000528267 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
SCN3B-205ENST00000528267 ERBB3P21860 1342 aa17.64■□□□□ 0.41
SCN3B-205ENST00000528267 SPATA31A1Q5TZJ5 1347 aa17.64■□□□□ 0.41
SCN3B-205ENST00000528267 RTL1A6NKG5 1358 aa17.64■□□□□ 0.41
SCN3B-205ENST00000528267 CDK12Q9NYV4 1490 aaPredicted RBP17.63■□□□□ 0.41
SCN3B-205ENST00000528267 RBM6P78332 1123 aaKnown RBP17.63■□□□□ 0.41
SCN3B-205ENST00000528267 CRB1P82279 1406 aa17.63■□□□□ 0.41
SCN3B-205ENST00000528267 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
SCN3B-205ENST00000528267 RXRBP28702 533 aa17.62■□□□□ 0.41
SCN3B-205ENST00000528267 CNGB1Q14028 1251 aaPredicted RBP17.62■□□□□ 0.41
SCN3B-205ENST00000528267 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
SCN3B-205ENST00000528267 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
SCN3B-205ENST00000528267 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
SCN3B-205ENST00000528267 FLT4P35916 1363 aa17.61■□□□□ 0.41
SCN3B-205ENST00000528267 AMPHP49418 695 aa17.6■□□□□ 0.41
SCN3B-205ENST00000528267 ANKRD24Q8TF21 1146 aa17.6■□□□□ 0.41
SCN3B-205ENST00000528267 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
SCN3B-205ENST00000528267 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
SCN3B-205ENST00000528267 INSRP06213 1382 aa17.59■□□□□ 0.41
SCN3B-205ENST00000528267 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
SCN3B-205ENST00000528267 EVA1CP58658 441 aa17.59■□□□□ 0.41
SCN3B-205ENST00000528267 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
SCN3B-205ENST00000528267 DISP2A7MBM2 1401 aa17.58■□□□□ 0.41
SCN3B-205ENST00000528267 LTV1Q96GA3 475 aaPredicted RBP17.58■□□□□ 0.4
SCN3B-205ENST00000528267 USP35Q9P2H5 1018 aa17.58■□□□□ 0.4
SCN3B-205ENST00000528267 COL3A1P02461 1466 aaPredicted RBP17.57■□□□□ 0.4
SCN3B-205ENST00000528267 ONECUT3O60422 494 aaPredicted RBP17.57■□□□□ 0.4
SCN3B-205ENST00000528267 FAM98CQ17RN3 349 aaKnown RBP17.57■□□□□ 0.4
SCN3B-205ENST00000528267 RGPD1P0DJD0 1748 aa17.57■□□□□ 0.4
SCN3B-205ENST00000528267 PARD3Q8TEW0 1356 aa17.56■□□□□ 0.4
SCN3B-205ENST00000528267 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
SCN3B-205ENST00000528267 SHANK3Q9BYB0 1731 aa17.55■□□□□ 0.4
SCN3B-205ENST00000528267 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
SCN3B-205ENST00000528267 EP400Q96L91 3159 aa17.55■□□□□ 0.4
SCN3B-205ENST00000528267 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
SCN3B-205ENST00000528267 CSB-PGBD3P0DP91 1061 aa17.54■□□□□ 0.4
SCN3B-205ENST00000528267 SEPT12Q8IYM1 358 aa17.54■□□□□ 0.4
SCN3B-205ENST00000528267 TCP11L2Q8N4U5 519 aa17.54■□□□□ 0.4
SCN3B-205ENST00000528267 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
SCN3B-205ENST00000528267 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
SCN3B-205ENST00000528267 BARGINQ6ZT62 677 aa17.53■□□□□ 0.4
SCN3B-205ENST00000528267 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
SCN3B-205ENST00000528267 MEGF6O75095 1541 aa17.52■□□□□ 0.4
SCN3B-205ENST00000528267 MTHFSP49914 203 aa17.52■□□□□ 0.4
SCN3B-205ENST00000528267 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
SCN3B-205ENST00000528267 USHBP1Q8N6Y0 703 aa17.52■□□□□ 0.4
SCN3B-205ENST00000528267 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
SCN3B-205ENST00000528267 PPP2R1AP30153 589 aa17.5■□□□□ 0.39
SCN3B-205ENST00000528267 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
SCN3B-205ENST00000528267 EYA1Q99502 592 aa17.48■□□□□ 0.39
SCN3B-205ENST00000528267 PKD1L3Q7Z443 1732 aa17.47■□□□□ 0.39
SCN3B-205ENST00000528267 IL13P35225 146 aa17.47■□□□□ 0.39
SCN3B-205ENST00000528267 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
SCN3B-205ENST00000528267 FAM182BQ5T319 152 aa17.46■□□□□ 0.39
SCN3B-205ENST00000528267 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.38
SCN3B-205ENST00000528267 A0A0G2JS52 829 aa17.45■□□□□ 0.38
SCN3B-205ENST00000528267 MYT1Q01538 1121 aa17.45■□□□□ 0.38
SCN3B-205ENST00000528267 OVOS2A0A0G2JMS6 1433 aa17.45■□□□□ 0.38
SCN3B-205ENST00000528267 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
SCN3B-205ENST00000528267 IL2RBP14784 551 aa17.43■□□□□ 0.38
SCN3B-205ENST00000528267 KRT27Q7Z3Y8 459 aa17.43■□□□□ 0.38
SCN3B-205ENST00000528267 AEBP1Q8IUX7 1158 aa17.43■□□□□ 0.38
SCN3B-205ENST00000528267 TNS1Q9HBL0 1735 aaKnown RBP17.42■□□□□ 0.38
SCN3B-205ENST00000528267 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
SCN3B-205ENST00000528267 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
SCN3B-205ENST00000528267 KDRP35968 1356 aa17.4■□□□□ 0.38
SCN3B-205ENST00000528267 RALBP1Q15311 655 aa17.4■□□□□ 0.38
SCN3B-205ENST00000528267 DDB1Q16531 1140 aa17.4■□□□□ 0.38
SCN3B-205ENST00000528267 TOGARAM1Q9Y4F4 1720 aa17.4■□□□□ 0.38
SCN3B-205ENST00000528267 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
SCN3B-205ENST00000528267 DIAPH1O60610 1272 aaKnown RBP17.38■□□□□ 0.37
SCN3B-205ENST00000528267 MYBBP1AQ9BQG0 1328 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms