RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 SYT17Q9BSW7 474 aa16.2■□□□□ 0.18
CCDC90B-210ENST00000528149 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
CCDC90B-210ENST00000528149 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
CCDC90B-210ENST00000528149 PEAK1Q9H792 1746 aa16.19■□□□□ 0.18
CCDC90B-210ENST00000528149 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
CCDC90B-210ENST00000528149 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
CCDC90B-210ENST00000528149 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
CCDC90B-210ENST00000528149 PLEKHG3A1L390 1219 aa16.18■□□□□ 0.18
CCDC90B-210ENST00000528149 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
CCDC90B-210ENST00000528149 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
CCDC90B-210ENST00000528149 SBF2Q86WG5 1849 aa16.17■□□□□ 0.18
CCDC90B-210ENST00000528149 MON2Q7Z3U7 1717 aa16.17■□□□□ 0.18
CCDC90B-210ENST00000528149 LARP1Q6PKG0 1096 aaKnown RBP16.16■□□□□ 0.18
CCDC90B-210ENST00000528149 OVOS2A0A0G2JMS6 1433 aa16.16■□□□□ 0.18
CCDC90B-210ENST00000528149 OVOS2A0A0J9YW53 1432 aa16.16■□□□□ 0.18
CCDC90B-210ENST00000528149 USP6P35125 1406 aa16.16■□□□□ 0.18
CCDC90B-210ENST00000528149 OVOS2Q6IE36 1432 aa16.16■□□□□ 0.18
CCDC90B-210ENST00000528149 ZC3H6P61129 1189 aaKnown RBP16.15■□□□□ 0.18
CCDC90B-210ENST00000528149 TCP11L2Q8N4U5 519 aa16.15■□□□□ 0.18
CCDC90B-210ENST00000528149 LMO7Q8WWI1 1683 aa16.14■□□□□ 0.18
CCDC90B-210ENST00000528149 PLSCR1O15162 318 aa16.14■□□□□ 0.17
CCDC90B-210ENST00000528149 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
CCDC90B-210ENST00000528149 SLC12A5Q9H2X9 1139 aa16.14■□□□□ 0.17
CCDC90B-210ENST00000528149 EVA1CP58658 441 aa16.13■□□□□ 0.17
CCDC90B-210ENST00000528149 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
CCDC90B-210ENST00000528149 SHANK3Q9BYB0 1731 aa16.13■□□□□ 0.17
CCDC90B-210ENST00000528149 GOLGB1Q14789 3259 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-210ENST00000528149 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
CCDC90B-210ENST00000528149 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-210ENST00000528149 SGIP1Q9BQI5 828 aa16.12■□□□□ 0.17
CCDC90B-210ENST00000528149 TMF1P82094 1093 aa16.11■□□□□ 0.17
CCDC90B-210ENST00000528149 PROM2Q8N271 834 aa16.11■□□□□ 0.17
CCDC90B-210ENST00000528149 A0A1W2PP64 1363 aa16.11■□□□□ 0.17
CCDC90B-210ENST00000528149 TMC1Q8TDI8 760 aa16.1■□□□□ 0.17
CCDC90B-210ENST00000528149 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
CCDC90B-210ENST00000528149 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
CCDC90B-210ENST00000528149 THRAP3Q9Y2W1 955 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-210ENST00000528149 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
CCDC90B-210ENST00000528149 STK32BQ9NY57 414 aa16.08■□□□□ 0.16
CCDC90B-210ENST00000528149 SLIT3O75094 1523 aa16.08■□□□□ 0.16
CCDC90B-210ENST00000528149 NME9Q86XW9 330 aa16.07■□□□□ 0.16
CCDC90B-210ENST00000528149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.163e-6■■■■□ 25.7
CCDC90B-210ENST00000528149 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
CCDC90B-210ENST00000528149 USP19O94966 1318 aa16.07■□□□□ 0.16
CCDC90B-210ENST00000528149 TTC21BQ7Z4L5 1316 aa16.07■□□□□ 0.16
CCDC90B-210ENST00000528149 KTN1Q86UP2 1357 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-210ENST00000528149 COL5A2P05997 1499 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-210ENST00000528149 CPDO75976 1380 aa16.06■□□□□ 0.16
CCDC90B-210ENST00000528149 SOX12O15370 315 aa16.06■□□□□ 0.16
CCDC90B-210ENST00000528149 SLC15A2Q16348 729 aa16.06■□□□□ 0.16
CCDC90B-210ENST00000528149 GPR162Q16538 588 aa16.06■□□□□ 0.16
CCDC90B-210ENST00000528149 ABTB2Q8N961 1025 aa16.06■□□□□ 0.16
CCDC90B-210ENST00000528149 ARXQ96QS3 562 aa16.06■□□□□ 0.16
CCDC90B-210ENST00000528149 KIF7Q2M1P5 1343 aa16.04■□□□□ 0.16
CCDC90B-210ENST00000528149 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
CCDC90B-210ENST00000528149 NFAT5O94916 1531 aa16.04■□□□□ 0.16
CCDC90B-210ENST00000528149 CRB1P82279 1406 aa16.03■□□□□ 0.16
CCDC90B-210ENST00000528149 WNK3Q9BYP7 1800 aa16.03■□□□□ 0.16
CCDC90B-210ENST00000528149 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
CCDC90B-210ENST00000528149 TXNRD1Q16881 649 aa16.03■□□□□ 0.16
CCDC90B-210ENST00000528149 CCDC7Q96M83 1385 aa16.02■□□□□ 0.16
CCDC90B-210ENST00000528149 USP54Q70EL1 1684 aa16.02■□□□□ 0.16
CCDC90B-210ENST00000528149 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
CCDC90B-210ENST00000528149 KIF20BQ96Q89 1820 aa16.02■□□□□ 0.16
CCDC90B-210ENST00000528149 COL18A1P39060 1754 aa16.02■□□□□ 0.15
CCDC90B-210ENST00000528149 RGPD5Q99666 1765 aa16.01■□□□□ 0.15
CCDC90B-210ENST00000528149 FBLN1P23142 703 aa16.01■□□□□ 0.15
CCDC90B-210ENST00000528149 NLRP6P59044 892 aa16.01■□□□□ 0.15
CCDC90B-210ENST00000528149 DDB1Q16531 1140 aa16.01■□□□□ 0.15
CCDC90B-210ENST00000528149 PUS7Q96PZ0 661 aaKnown RBP16.01■□□□□ 0.15
CCDC90B-210ENST00000528149 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
CCDC90B-210ENST00000528149 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
CCDC90B-210ENST00000528149 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
CCDC90B-210ENST00000528149 BCL9O00512 1426 aa16■□□□□ 0.15
CCDC90B-210ENST00000528149 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
CCDC90B-210ENST00000528149 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
CCDC90B-210ENST00000528149 GCP02774 474 aa15.99■□□□□ 0.15
CCDC90B-210ENST00000528149 MARCH10Q8NA82 808 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-210ENST00000528149 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
CCDC90B-210ENST00000528149 KLHL34Q8N239 644 aa15.98■□□□□ 0.15
CCDC90B-210ENST00000528149 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
CCDC90B-210ENST00000528149 HSPA6P17066 643 aa15.97■□□□□ 0.15
CCDC90B-210ENST00000528149 LTN1O94822 1766 aa15.97■□□□□ 0.15
CCDC90B-210ENST00000528149 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
CCDC90B-210ENST00000528149 ATP10DQ9P241 1426 aa15.96■□□□□ 0.15
CCDC90B-210ENST00000528149 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-210ENST00000528149 NLRP13Q86W25 1043 aa15.96■□□□□ 0.15
CCDC90B-210ENST00000528149 TTC21AQ8NDW8 1320 aa15.95■□□□□ 0.14
CCDC90B-210ENST00000528149 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
CCDC90B-210ENST00000528149 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-210ENST00000528149 AXIN2Q9Y2T1 843 aa15.95■□□□□ 0.14
CCDC90B-210ENST00000528149 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-210ENST00000528149 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
CCDC90B-210ENST00000528149 ZNF827Q17R98 1081 aa15.93■□□□□ 0.14
CCDC90B-210ENST00000528149 NLGN2Q8NFZ4 835 aa15.93■□□□□ 0.14
CCDC90B-210ENST00000528149 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
CCDC90B-210ENST00000528149 TERF2IPQ9NYB0 399 aa15.93■□□□□ 0.14
CCDC90B-210ENST00000528149 NHSQ6T4R5 1651 aa15.92■□□□□ 0.14
CCDC90B-210ENST00000528149 COL24A1Q17RW2 1714 aa15.92■□□□□ 0.14
CCDC90B-210ENST00000528149 TOM1L2Q6ZVM7 507 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms