RNA–Protein interactions for RNA: ENST00000527584.5

PUF60-210, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-210ENST00000527584 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
PUF60-210ENST00000527584 DDB1Q16531 1140 aa13□□□□□ -0.33
PUF60-210ENST00000527584 FAM161AQ3B820 660 aa13□□□□□ -0.33
PUF60-210ENST00000527584 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
PUF60-210ENST00000527584 RBM46Q8TBY0 533 aaKnown RBP12.98□□□□□ -0.33
PUF60-210ENST00000527584 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
PUF60-210ENST00000527584 TMEM132EQ6IEE7 984 aa12.97□□□□□ -0.33
PUF60-210ENST00000527584 CPDO75976 1380 aa12.96□□□□□ -0.33
PUF60-210ENST00000527584 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
PUF60-210ENST00000527584 AKAP12Q02952 1782 aa12.96□□□□□ -0.34
PUF60-210ENST00000527584 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
PUF60-210ENST00000527584 CRB1P82279 1406 aa12.96□□□□□ -0.34
PUF60-210ENST00000527584 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.34
PUF60-210ENST00000527584 FSTL1Q12841 308 aa12.95□□□□□ -0.34
PUF60-210ENST00000527584 LRRC4BQ9NT99 713 aa12.95□□□□□ -0.34
PUF60-210ENST00000527584 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
PUF60-210ENST00000527584 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
PUF60-210ENST00000527584 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
PUF60-210ENST00000527584 ROCK1Q13464 1354 aa12.93□□□□□ -0.34
PUF60-210ENST00000527584 TUBGCP6Q96RT7 1819 aa12.92□□□□□ -0.34
PUF60-210ENST00000527584 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
PUF60-210ENST00000527584 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
PUF60-210ENST00000527584 PRR36Q9H6K5 1346 aa12.91□□□□□ -0.34
PUF60-210ENST00000527584 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
PUF60-210ENST00000527584 NHSQ6T4R5 1651 aa12.91□□□□□ -0.34
PUF60-210ENST00000527584 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
PUF60-210ENST00000527584 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
PUF60-210ENST00000527584 RGS19P49795 217 aa12.9□□□□□ -0.34
PUF60-210ENST00000527584 CICQ96RK0 1608 aaPredicted RBP12.9□□□□□ -0.34
PUF60-210ENST00000527584 CDCA7Q9BWT1 371 aaPredicted RBP12.89□□□□□ -0.35
PUF60-210ENST00000527584 MLLT1Q03111 559 aaPredicted RBP12.87□□□□□ -0.35
PUF60-210ENST00000527584 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
PUF60-210ENST00000527584 PRDM10Q9NQV6 1147 aa12.87□□□□□ -0.35
PUF60-210ENST00000527584 BTAF1O14981 1849 aa12.86□□□□□ -0.35
PUF60-210ENST00000527584 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
PUF60-210ENST00000527584 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
PUF60-210ENST00000527584 PRAM1Q96QH2 718 aa12.86□□□□□ -0.35
PUF60-210ENST00000527584 PIK3C2GO75747 1445 aa12.86□□□□□ -0.35
PUF60-210ENST00000527584 USP19O94966 1318 aa12.86□□□□□ -0.35
PUF60-210ENST00000527584 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
PUF60-210ENST00000527584 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
PUF60-210ENST00000527584 TFCP2L1Q9NZI6 479 aa12.84□□□□□ -0.35
PUF60-210ENST00000527584 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
PUF60-210ENST00000527584 EIF3AQ14152 1382 aaKnown RBP12.82□□□□□ -0.36
PUF60-210ENST00000527584 USP6P35125 1406 aa12.82□□□□□ -0.36
PUF60-210ENST00000527584 EXOC5O00471 708 aa12.82□□□□□ -0.36
PUF60-210ENST00000527584 GCP02774 474 aa12.82□□□□□ -0.36
PUF60-210ENST00000527584 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
PUF60-210ENST00000527584 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
PUF60-210ENST00000527584 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
PUF60-210ENST00000527584 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
PUF60-210ENST00000527584 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
PUF60-210ENST00000527584 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
PUF60-210ENST00000527584 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
PUF60-210ENST00000527584 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
PUF60-210ENST00000527584 PDE4DIPQ5VU43 2346 aa12.8□□□□□ -0.36
PUF60-210ENST00000527584 COL18A1P39060 1754 aa12.8□□□□□ -0.36
PUF60-210ENST00000527584 FOXN1O15353 648 aa12.8□□□□□ -0.36
PUF60-210ENST00000527584 COL23A1Q86Y22 540 aaPredicted RBP12.8□□□□□ -0.36
PUF60-210ENST00000527584 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
PUF60-210ENST00000527584 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
PUF60-210ENST00000527584 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
PUF60-210ENST00000527584 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
PUF60-210ENST00000527584 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
PUF60-210ENST00000527584 CARD10Q9BWT7 1032 aa12.77□□□□□ -0.37
PUF60-210ENST00000527584 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
PUF60-210ENST00000527584 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
PUF60-210ENST00000527584 MSL1Q68DK7 614 aa12.76□□□□□ -0.37
PUF60-210ENST00000527584 POGKQ9P215 609 aa12.76□□□□□ -0.37
PUF60-210ENST00000527584 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
PUF60-210ENST00000527584 SPATA31E1Q6ZUB1 1445 aa12.76□□□□□ -0.37
PUF60-210ENST00000527584 TNRC18O15417 2968 aaPredicted RBP12.75□□□□□ -0.37
PUF60-210ENST00000527584 ABCC6O95255 1503 aa12.75□□□□□ -0.37
PUF60-210ENST00000527584 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
PUF60-210ENST00000527584 KCNQ4P56696 695 aa12.74□□□□□ -0.37
PUF60-210ENST00000527584 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
PUF60-210ENST00000527584 LY75O60449 1722 aa12.74□□□□□ -0.37
PUF60-210ENST00000527584 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
PUF60-210ENST00000527584 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
PUF60-210ENST00000527584 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
PUF60-210ENST00000527584 CFAP70Q5T0N1 1121 aa12.72□□□□□ -0.37
PUF60-210ENST00000527584 NUDT16Q96DE0 195 aaKnown RBP12.72□□□□□ -0.37
PUF60-210ENST00000527584 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
PUF60-210ENST00000527584 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
PUF60-210ENST00000527584 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.37
PUF60-210ENST00000527584 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.37
PUF60-210ENST00000527584 RGL3Q3MIN7 710 aa12.71□□□□□ -0.37
PUF60-210ENST00000527584 QRICH2Q9H0J4 1663 aa12.7□□□□□ -0.38
PUF60-210ENST00000527584 ACEP12821 1306 aa12.7□□□□□ -0.38
PUF60-210ENST00000527584 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
PUF60-210ENST00000527584 MSH5O43196 834 aa12.7□□□□□ -0.38
PUF60-210ENST00000527584 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
PUF60-210ENST00000527584 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
PUF60-210ENST00000527584 SLIT3O75094 1523 aa12.69□□□□□ -0.38
PUF60-210ENST00000527584 PPIP5K1Q6PFW1 1433 aa12.69□□□□□ -0.38
PUF60-210ENST00000527584 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
PUF60-210ENST00000527584 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
PUF60-210ENST00000527584 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
PUF60-210ENST00000527584 LBX1P52954 281 aa12.68□□□□□ -0.38
PUF60-210ENST00000527584 CCDC85CA6NKD9 419 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms