RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 USP21Q9UK80 565 aa22.76■■□□□ 1.23
SMCO4-204ENST00000527149 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
SMCO4-204ENST00000527149 RRS1Q15050 365 aaKnown RBP22.75■■□□□ 1.23
SMCO4-204ENST00000527149 UNC5CLQ8IV45 518 aa22.75■■□□□ 1.23
SMCO4-204ENST00000527149 CC2D1BQ5T0F9 858 aaKnown RBP22.74■■□□□ 1.23
SMCO4-204ENST00000527149 ZNF772Q68DY9 489 aaPredicted RBP22.74■■□□□ 1.23
SMCO4-204ENST00000527149 GLI3P10071 1580 aa22.74■■□□□ 1.23
SMCO4-204ENST00000527149 KIF24Q5T7B8 1368 aa22.74■■□□□ 1.23
SMCO4-204ENST00000527149 ZBTB7CA1YPR0 619 aa22.73■■□□□ 1.23
SMCO4-204ENST00000527149 POTEAQ6S8J7 498 aa22.73■■□□□ 1.23
SMCO4-204ENST00000527149 MORC1Q86VD1 984 aa22.73■■□□□ 1.23
SMCO4-204ENST00000527149 BLMP54132 1417 aaPredicted RBP22.73■■□□□ 1.23
SMCO4-204ENST00000527149 EMILIN1Q9Y6C2 1016 aa22.72■■□□□ 1.23
SMCO4-204ENST00000527149 HOXC9P31274 260 aa22.71■■□□□ 1.23
SMCO4-204ENST00000527149 IP6K1Q92551 441 aa22.71■■□□□ 1.23
SMCO4-204ENST00000527149 POLKQ9UBT6 870 aa22.71■■□□□ 1.23
SMCO4-204ENST00000527149 TNNT2P45379 298 aaPredicted RBP22.7■■□□□ 1.22
SMCO4-204ENST00000527149 FLT4P35916 1363 aa22.7■■□□□ 1.22
SMCO4-204ENST00000527149 FAM208AQ9UK61 1670 aaKnown RBP22.69■■□□□ 1.22
SMCO4-204ENST00000527149 CDK12Q9NYV4 1490 aaPredicted RBP22.69■■□□□ 1.22
SMCO4-204ENST00000527149 PARD3Q8TEW0 1356 aa22.69■■□□□ 1.22
SMCO4-204ENST00000527149 ERBB3P21860 1342 aa22.69■■□□□ 1.22
SMCO4-204ENST00000527149 VPS72Q15906 364 aa22.69■■□□□ 1.22
SMCO4-204ENST00000527149 TRPC5Q9UL62 973 aaPredicted RBP22.68■■□□□ 1.22
SMCO4-204ENST00000527149 INSRP06213 1382 aa22.66■■□□□ 1.22
SMCO4-204ENST00000527149 SPATA31A5Q5VU36 1347 aa22.66■■□□□ 1.22
SMCO4-204ENST00000527149 SPATA31A7Q8IWB4 1347 aa22.66■■□□□ 1.22
SMCO4-204ENST00000527149 WDR17Q8IZU2 1322 aa22.66■■□□□ 1.22
SMCO4-204ENST00000527149 LARP1Q6PKG0 1096 aaKnown RBP22.66■■□□□ 1.22
SMCO4-204ENST00000527149 QTRT2Q9H974 415 aaKnown RBP22.66■■□□□ 1.22
SMCO4-204ENST00000527149 AMPHP49418 695 aa22.65■■□□□ 1.22
SMCO4-204ENST00000527149 STRN4Q9NRL3 753 aa22.65■■□□□ 1.22
SMCO4-204ENST00000527149 RGPD2P0DJD1 1756 aa22.65■■□□□ 1.22
SMCO4-204ENST00000527149 CRB1P82279 1406 aa22.65■■□□□ 1.22
SMCO4-204ENST00000527149 WNK3Q9BYP7 1800 aa22.64■■□□□ 1.22
SMCO4-204ENST00000527149 CNGB1Q14028 1251 aaPredicted RBP22.64■■□□□ 1.21
SMCO4-204ENST00000527149 HSP90AB2PQ58FF8 381 aa22.64■■□□□ 1.21
SMCO4-204ENST00000527149 SPATA31A1Q5TZJ5 1347 aa22.63■■□□□ 1.21
SMCO4-204ENST00000527149 THSD7AQ9UPZ6 1657 aa22.63■■□□□ 1.21
SMCO4-204ENST00000527149 GJD4Q96KN9 370 aaPredicted RBP22.63■■□□□ 1.21
SMCO4-204ENST00000527149 COL3A1P02461 1466 aaPredicted RBP22.62■■□□□ 1.21
SMCO4-204ENST00000527149 ANKRD24Q8TF21 1146 aa22.62■■□□□ 1.21
SMCO4-204ENST00000527149 RBM6P78332 1123 aaKnown RBP22.61■■□□□ 1.21
SMCO4-204ENST00000527149 RGS12O14924 1447 aa22.6■■□□□ 1.21
SMCO4-204ENST00000527149 EVA1CP58658 441 aa22.6■■□□□ 1.21
SMCO4-204ENST00000527149 NCAPD2Q15021 1401 aa22.59■■□□□ 1.21
SMCO4-204ENST00000527149 PPM1GO15355 546 aaPredicted RBP22.59■■□□□ 1.21
SMCO4-204ENST00000527149 RGPD1P0DJD0 1748 aa22.58■■□□□ 1.21
SMCO4-204ENST00000527149 PPP2R1AP30153 589 aa22.58■■□□□ 1.21
SMCO4-204ENST00000527149 MTHFSP49914 203 aa22.58■■□□□ 1.21
SMCO4-204ENST00000527149 DISP2A7MBM2 1401 aa22.57■■□□□ 1.2
SMCO4-204ENST00000527149 RXRBP28702 533 aa22.57■■□□□ 1.2
SMCO4-204ENST00000527149 CARD10Q9BWT7 1032 aa22.57■■□□□ 1.2
SMCO4-204ENST00000527149 CCDC9Q9Y3X0 531 aaKnown RBP22.57■■□□□ 1.2
SMCO4-204ENST00000527149 CSB-PGBD3P0DP91 1061 aa22.56■■□□□ 1.2
SMCO4-204ENST00000527149 TOM1L2Q6ZVM7 507 aa22.56■■□□□ 1.2
SMCO4-204ENST00000527149 LTV1Q96GA3 475 aaPredicted RBP22.56■■□□□ 1.2
SMCO4-204ENST00000527149 PARP4Q9UKK3 1724 aaKnown RBP22.56■■□□□ 1.2
SMCO4-204ENST00000527149 ONECUT3O60422 494 aaPredicted RBP22.55■■□□□ 1.2
SMCO4-204ENST00000527149 EIF4A2Q14240 407 aaKnown RBP22.55■■□□□ 1.2
SMCO4-204ENST00000527149 EP400Q96L91 3159 aa22.55■■□□□ 1.2
SMCO4-204ENST00000527149 RALBP1Q15311 655 aa22.54■■□□□ 1.2
SMCO4-204ENST00000527149 BARGINQ6ZT62 677 aa22.54■■□□□ 1.2
SMCO4-204ENST00000527149 TCP11L2Q8N4U5 519 aa22.54■■□□□ 1.2
SMCO4-204ENST00000527149 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
SMCO4-204ENST00000527149 LRRC37A3O60309 1634 aa22.53■■□□□ 1.2
SMCO4-204ENST00000527149 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
SMCO4-204ENST00000527149 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
SMCO4-204ENST00000527149 THRAP3Q9Y2W1 955 aaKnown RBP22.53■■□□□ 1.2
SMCO4-204ENST00000527149 FAM98CQ17RN3 349 aaKnown RBP22.52■■□□□ 1.2
SMCO4-204ENST00000527149 NBPF6Q5VWK0 638 aa22.52■■□□□ 1.2
SMCO4-204ENST00000527149 NBPF4Q96M43 638 aa22.52■■□□□ 1.2
SMCO4-204ENST00000527149 NLRP2Q9NX02 1062 aa22.52■■□□□ 1.2
SMCO4-204ENST00000527149 ILDR2Q71H61 639 aa22.51■■□□□ 1.19
SMCO4-204ENST00000527149 IL13P35225 146 aa22.5■■□□□ 1.19
SMCO4-204ENST00000527149 MEGF6O75095 1541 aa22.49■■□□□ 1.19
SMCO4-204ENST00000527149 IGSF1Q8N6C5 1336 aa22.49■■□□□ 1.19
SMCO4-204ENST00000527149 EYA1Q99502 592 aa22.48■■□□□ 1.19
SMCO4-204ENST00000527149 MYBBP1AQ9BQG0 1328 aaKnown RBP22.48■■□□□ 1.19
SMCO4-204ENST00000527149 SEPT12Q8IYM1 358 aa22.47■■□□□ 1.19
SMCO4-204ENST00000527149 USHBP1Q8N6Y0 703 aa22.47■■□□□ 1.19
SMCO4-204ENST00000527149 SHANK3Q9BYB0 1731 aa22.47■■□□□ 1.19
SMCO4-204ENST00000527149 KDRP35968 1356 aa22.45■■□□□ 1.18
SMCO4-204ENST00000527149 OVOS2A0A0G2JMS6 1433 aa22.45■■□□□ 1.18
SMCO4-204ENST00000527149 TNS2Q63HR2 1409 aa22.45■■□□□ 1.18
SMCO4-204ENST00000527149 PKD1L3Q7Z443 1732 aa22.44■■□□□ 1.18
SMCO4-204ENST00000527149 DIAPH1O60610 1272 aaKnown RBP22.43■■□□□ 1.18
SMCO4-204ENST00000527149 CDCA7Q9BWT1 371 aaPredicted RBP22.43■■□□□ 1.18
SMCO4-204ENST00000527149 IL2RBP14784 551 aa22.42■■□□□ 1.18
SMCO4-204ENST00000527149 AEBP1Q8IUX7 1158 aa22.4■■□□□ 1.18
SMCO4-204ENST00000527149 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
SMCO4-204ENST00000527149 PLEKHG2Q9H7P9 1386 aa22.39■■□□□ 1.18
SMCO4-204ENST00000527149 A0A0G2JS52 829 aa22.38■■□□□ 1.17
SMCO4-204ENST00000527149 MYT1Q01538 1121 aa22.38■■□□□ 1.17
SMCO4-204ENST00000527149 ANP32CO43423 234 aa22.36■■□□□ 1.17
SMCO4-204ENST00000527149 DDB1Q16531 1140 aa22.36■■□□□ 1.17
SMCO4-204ENST00000527149 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
SMCO4-204ENST00000527149 KRT27Q7Z3Y8 459 aa22.35■■□□□ 1.17
SMCO4-204ENST00000527149 RAPGEF4Q8WZA2 1011 aa22.35■■□□□ 1.17
SMCO4-204ENST00000527149 HMOX1P09601 288 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms