RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 SMC4Q9NTJ3 1288 aa11.63□□□□□ -0.55
SCN3B-203ENST00000527125 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
SCN3B-203ENST00000527125 HS1BP3Q53T59 392 aa11.63□□□□□ -0.55
SCN3B-203ENST00000527125 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
SCN3B-203ENST00000527125 YTHDC2Q9H6S0 1430 aaKnown RBP11.63□□□□□ -0.55
SCN3B-203ENST00000527125 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
SCN3B-203ENST00000527125 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
SCN3B-203ENST00000527125 GCC1Q96CN9 775 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 EVC2Q86UK5 1308 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 CCDC173Q0VFZ6 552 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 TBC1D9Q6ZT07 1266 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
SCN3B-203ENST00000527125 GAS2L2Q8NHY3 880 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 OFD1O75665 1012 aa11.62□□□□□ -0.55
SCN3B-203ENST00000527125 FTSJ3Q8IY81 847 aaKnown RBP11.62□□□□□ -0.55
SCN3B-203ENST00000527125 ATP7BP35670 1465 aa11.61□□□□□ -0.55
SCN3B-203ENST00000527125 FYB1O15117 783 aa11.61□□□□□ -0.55
SCN3B-203ENST00000527125 NRXN3Q9Y4C0 1643 aa11.61□□□□□ -0.55
SCN3B-203ENST00000527125 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
SCN3B-203ENST00000527125 CRYBG1Q9Y4K1 1723 aa11.61□□□□□ -0.55
SCN3B-203ENST00000527125 HSP90AA1P07900 732 aaKnown RBP11.6□□□□□ -0.55
SCN3B-203ENST00000527125 GSPT1P15170 499 aaKnown RBP11.6□□□□□ -0.55
SCN3B-203ENST00000527125 RIPK4P57078 832 aa11.6□□□□□ -0.55
SCN3B-203ENST00000527125 IL17RAQ96F46 866 aa11.6□□□□□ -0.55
SCN3B-203ENST00000527125 GBP4Q96PP9 640 aa11.6□□□□□ -0.55
SCN3B-203ENST00000527125 CDK12Q9NYV4 1490 aaPredicted RBP11.6□□□□□ -0.55
SCN3B-203ENST00000527125 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
SCN3B-203ENST00000527125 VAMP4O75379 141 aa11.6□□□□□ -0.55
SCN3B-203ENST00000527125 U2AF1L5P0DN76 240 aaPredicted RBP11.6□□□□□ -0.55
SCN3B-203ENST00000527125 U2AF1Q01081 240 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCN3B-203ENST00000527125 ITPRIPQ8IWB1 547 aa11.6□□□□□ -0.55
SCN3B-203ENST00000527125 BAG4O95429 457 aaKnown RBP11.59□□□□□ -0.55
SCN3B-203ENST00000527125 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
SCN3B-203ENST00000527125 LMBRD1Q9NUN5 540 aa11.59□□□□□ -0.55
SCN3B-203ENST00000527125 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
SCN3B-203ENST00000527125 TMEM132EQ6IEE7 984 aa11.59□□□□□ -0.55
SCN3B-203ENST00000527125 SSFA2P28290 1259 aa11.59□□□□□ -0.55
SCN3B-203ENST00000527125 TNNT2P45379 298 aaPredicted RBP11.59□□□□□ -0.55
SCN3B-203ENST00000527125 NAP1L5Q96NT1 182 aaPredicted RBP11.59□□□□□ -0.55
SCN3B-203ENST00000527125 XRN1Q8IZH2 1706 aaKnown RBP11.58□□□□□ -0.55
SCN3B-203ENST00000527125 ATAD2Q6PL18 1390 aa11.58□□□□□ -0.55
SCN3B-203ENST00000527125 ZSCAN30Q86W11 494 aa11.58□□□□□ -0.56
SCN3B-203ENST00000527125 ZMYND15Q9H091 742 aa11.58□□□□□ -0.56
SCN3B-203ENST00000527125 RBM42Q9BTD8 480 aaKnown RBP11.58□□□□□ -0.56
SCN3B-203ENST00000527125 PDCL3Q9H2J4 239 aa11.58□□□□□ -0.56
SCN3B-203ENST00000527125 IPO8O15397 1037 aaKnown RBP11.57□□□□□ -0.56
SCN3B-203ENST00000527125 LNPKQ9C0E8 428 aa11.57□□□□□ -0.56
SCN3B-203ENST00000527125 ZDHHC9Q9Y397 364 aa11.57□□□□□ -0.56
SCN3B-203ENST00000527125 LRRC37A3O60309 1634 aa11.57□□□□□ -0.56
SCN3B-203ENST00000527125 TOPAZ1Q8N9V7 1692 aa11.57□□□□□ -0.56
SCN3B-203ENST00000527125 FCHSD2O94868 740 aa11.57□□□□□ -0.56
SCN3B-203ENST00000527125 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
SCN3B-203ENST00000527125 NOL7Q9UMY1 257 aaKnown RBP11.56□□□□□ -0.56
SCN3B-203ENST00000527125 USP26Q9BXU7 913 aa11.56□□□□□ -0.56
SCN3B-203ENST00000527125 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
SCN3B-203ENST00000527125 A0A0U1RQG5 324 aaPredicted RBP11.55□□□□□ -0.56
SCN3B-203ENST00000527125 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
SCN3B-203ENST00000527125 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
SCN3B-203ENST00000527125 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
SCN3B-203ENST00000527125 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
SCN3B-203ENST00000527125 FMN2Q9NZ56 1722 aa11.54□□□□□ -0.56
SCN3B-203ENST00000527125 HSP90AB1P08238 724 aaKnown RBP11.54□□□□□ -0.56
SCN3B-203ENST00000527125 NASPP49321 788 aaPredicted RBP11.54□□□□□ -0.56
SCN3B-203ENST00000527125 GPT2Q8TD30 523 aa11.54□□□□□ -0.56
SCN3B-203ENST00000527125 PRDM4Q9UKN5 801 aa11.54□□□□□ -0.56
SCN3B-203ENST00000527125 CDC45O75419 566 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 ZSCAN23Q3MJ62 389 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 IFT57Q9NWB7 429 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 RABEP1Q15276 862 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 GLIPR1L2Q4G1C9 344 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 RBSNQ9H1K0 784 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 NEO1Q92859 1461 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 SPATA31D1Q6ZQQ2 1576 aa11.53□□□□□ -0.56
SCN3B-203ENST00000527125 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.56
SCN3B-203ENST00000527125 TSPYL6Q8N831 410 aa11.52□□□□□ -0.56
SCN3B-203ENST00000527125 CACNA1FO60840 1977 aa11.52□□□□□ -0.56
SCN3B-203ENST00000527125 INTS3Q68E01 1043 aaKnown RBP11.52□□□□□ -0.57
SCN3B-203ENST00000527125 SALL3Q9BXA9 1300 aa11.52□□□□□ -0.57
SCN3B-203ENST00000527125 DIAPH1O60610 1272 aaKnown RBP11.52□□□□□ -0.57
SCN3B-203ENST00000527125 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
SCN3B-203ENST00000527125 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
SCN3B-203ENST00000527125 VGFO15240 615 aaPredicted RBP11.51□□□□□ -0.57
SCN3B-203ENST00000527125 CALD1Q05682 793 aaKnown RBP11.51□□□□□ -0.57
SCN3B-203ENST00000527125 NFE2L2Q16236 605 aa11.51□□□□□ -0.57
SCN3B-203ENST00000527125 POLKQ9UBT6 870 aa11.51□□□□□ -0.57
SCN3B-203ENST00000527125 RIMS2Q9UQ26 1411 aa11.51□□□□□ -0.57
SCN3B-203ENST00000527125 PKP1Q13835 747 aa11.51□□□□□ -0.57
SCN3B-203ENST00000527125 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
SCN3B-203ENST00000527125 IL13P35225 146 aa11.5□□□□□ -0.57
SCN3B-203ENST00000527125 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
SCN3B-203ENST00000527125 TCHHQ07283 1943 aa11.5□□□□□ -0.57
SCN3B-203ENST00000527125 CPS1P31327 1500 aa11.5□□□□□ -0.57
SCN3B-203ENST00000527125 MCM5P33992 734 aa11.5□□□□□ -0.57
SCN3B-203ENST00000527125 ANKRD45Q5TZF3 282 aa11.5□□□□□ -0.57
SCN3B-203ENST00000527125 CWC22Q9HCG8 908 aaKnown RBP11.5□□□□□ -0.57
SCN3B-203ENST00000527125 NUCB2P80303 420 aa11.5□□□□□ -0.57
SCN3B-203ENST00000527125 ARXQ96QS3 562 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms