RNA–Protein interactions for RNA: ENST00000526884.1

NFRKB-204, Transcript of nuclear factor related to kappaB binding protein, human

TSL 3

Gene NFRKB, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFRKB-204	ENST00000526884	PARP4	Q9UKK3	1724 aa	Known RBP	33.14	■■■□□ 2.9
NFRKB-204	ENST00000526884		A0A0G2JS52	829 aa		33.13	■■■□□ 2.89
NFRKB-204	ENST00000526884	MYT1	Q01538	1121 aa		33.13	■■■□□ 2.89
NFRKB-204	ENST00000526884	BARGIN	Q6ZT62	677 aa		33.13	■■■□□ 2.89
NFRKB-204	ENST00000526884	KRT27	Q7Z3Y8	459 aa		33.13	■■■□□ 2.89
NFRKB-204	ENST00000526884	CCDC125	Q86Z20	511 aa		33.13	■■■□□ 2.89
NFRKB-204	ENST00000526884	THRAP3	Q9Y2W1	955 aa	Known RBP	33.13	■■■□□ 2.89
NFRKB-204	ENST00000526884	ZBTB7C	A1YPR0	619 aa		33.11	■■■□□ 2.89
NFRKB-204	ENST00000526884	LARP1	Q6PKG0	1096 aa	Known RBP	33.11	■■■□□ 2.89
NFRKB-204	ENST00000526884	ZRANB1	Q9UGI0	708 aa		33.1	■■■□□ 2.89
NFRKB-204	ENST00000526884	TCP11L2	Q8N4U5	519 aa		33.09	■■■□□ 2.89
NFRKB-204	ENST00000526884	SOX12	O15370	315 aa		33.08	■■■□□ 2.89
NFRKB-204	ENST00000526884	HSPA5	P11021	654 aa	Known RBP	33.08	■■■□□ 2.89
NFRKB-204	ENST00000526884	WDR17	Q8IZU2	1322 aa		33.07	■■■□□ 2.88
NFRKB-204	ENST00000526884	FAM208A	Q9UK61	1670 aa	Known RBP	33.07	■■■□□ 2.88
NFRKB-204	ENST00000526884	BLM	P54132	1417 aa	Predicted RBP	33.06	■■■□□ 2.88
NFRKB-204	ENST00000526884	COG3	Q96JB2	828 aa		33.06	■■■□□ 2.88
NFRKB-204	ENST00000526884	RGPD1	P0DJD0	1748 aa		33.05	■■■□□ 2.88
NFRKB-204	ENST00000526884	USP35	Q9P2H5	1018 aa		33.04	■■■□□ 2.88
NFRKB-204	ENST00000526884	AXIN2	Q9Y2T1	843 aa		33.04	■■■□□ 2.88
NFRKB-204	ENST00000526884	LRRC37A3	O60309	1634 aa		33	■■■□□ 2.87
NFRKB-204	ENST00000526884	TOM1L2	Q6ZVM7	507 aa		33	■■■□□ 2.87
NFRKB-204	ENST00000526884	NSD3	Q9BZ95	1437 aa		32.98	■■■□□ 2.87
NFRKB-204	ENST00000526884	ANKRD26	Q9UPS8	1709 aa		32.98	■■■□□ 2.87
NFRKB-204	ENST00000526884	FYB1	O15117	783 aa		32.97	■■■□□ 2.87
NFRKB-204	ENST00000526884	CCDC7	Q96M83	1385 aa		32.96	■■■□□ 2.87
NFRKB-204	ENST00000526884	ERBB3	P21860	1342 aa		32.96	■■■□□ 2.87
NFRKB-204	ENST00000526884	CSB-PGBD3	P0DP91	1061 aa		32.95	■■■□□ 2.87
NFRKB-204	ENST00000526884	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.95	■■■□□ 2.87
NFRKB-204	ENST00000526884	CARD10	Q9BWT7	1032 aa		32.95	■■■□□ 2.87
NFRKB-204	ENST00000526884	RTL1	A6NKG5	1358 aa		32.94	■■■□□ 2.86
NFRKB-204	ENST00000526884	TNS1	Q9HBL0	1735 aa	Known RBP	32.94	■■■□□ 2.86
NFRKB-204	ENST00000526884	SF3B2	Q13435	895 aa	Known RBP	32.92	■■■□□ 2.86
NFRKB-204	ENST00000526884	CARD14	Q9BXL6	1004 aa		32.91	■■■□□ 2.86
NFRKB-204	ENST00000526884	GGNBP2	Q9H3C7	697 aa		32.91	■■■□□ 2.86
NFRKB-204	ENST00000526884	PDE3B	Q13370	1112 aa		32.9	■■■□□ 2.86
NFRKB-204	ENST00000526884	IP6K1	Q92551	441 aa		32.9	■■■□□ 2.86
NFRKB-204	ENST00000526884	DISP2	A7MBM2	1401 aa		32.89	■■■□□ 2.86
NFRKB-204	ENST00000526884	CGNL1	Q0VF96	1302 aa		32.89	■■■□□ 2.86
NFRKB-204	ENST00000526884	C11orf95	C9JLR9	678 aa	Predicted RBP	32.89	■■■□□ 2.86
NFRKB-204	ENST00000526884	PEAK1	Q9H792	1746 aa		32.88	■■■□□ 2.85
NFRKB-204	ENST00000526884	MAP3K19	Q56UN5	1328 aa		32.88	■■■□□ 2.85
NFRKB-204	ENST00000526884	FAM196A	Q6ZSG2	479 aa		32.88	■■■□□ 2.85
NFRKB-204	ENST00000526884	POLR3GL	Q9BT43	218 aa		32.88	■■■□□ 2.85
NFRKB-204	ENST00000526884	KIF24	Q5T7B8	1368 aa		32.87	■■■□□ 2.85
NFRKB-204	ENST00000526884	SBF2	Q86WG5	1849 aa		32.86	■■■□□ 2.85
NFRKB-204	ENST00000526884	ANKRD24	Q8TF21	1146 aa		32.85	■■■□□ 2.85
NFRKB-204	ENST00000526884	MAP2	P11137	1827 aa	Known RBP	32.85	■■■□□ 2.85
NFRKB-204	ENST00000526884	DDB1	Q16531	1140 aa		32.83	■■■□□ 2.85
NFRKB-204	ENST00000526884	OVOS2	A0A0G2JMS6	1433 aa		32.83	■■■□□ 2.85
NFRKB-204	ENST00000526884	HOXC9	P31274	260 aa		32.82	■■■□□ 2.84
NFRKB-204	ENST00000526884	AMPH	P49418	695 aa		32.82	■■■□□ 2.84
NFRKB-204	ENST00000526884	RGPD2	P0DJD1	1756 aa		32.82	■■■□□ 2.84
NFRKB-204	ENST00000526884	TNS2	Q63HR2	1409 aa		32.8	■■■□□ 2.84
NFRKB-204	ENST00000526884	FAM182B	Q5T319	152 aa		32.8	■■■□□ 2.84
NFRKB-204	ENST00000526884	NLRP2	Q9NX02	1062 aa		32.8	■■■□□ 2.84
NFRKB-204	ENST00000526884	BAG6	P46379	1132 aa		32.79	■■■□□ 2.84
NFRKB-204	ENST00000526884	NSD2	O96028	1365 aa		32.79	■■■□□ 2.84
NFRKB-204	ENST00000526884	SMG6	Q86US8	1419 aa	Known RBP	32.78	■■■□□ 2.84
NFRKB-204	ENST00000526884	FLT4	P35916	1363 aa		32.78	■■■□□ 2.84
NFRKB-204	ENST00000526884	BCL9	O00512	1426 aa		32.77	■■■□□ 2.84
NFRKB-204	ENST00000526884	RRS1	Q15050	365 aa	Known RBP	32.75	■■■□□ 2.83
NFRKB-204	ENST00000526884	PANK3	Q9H999	370 aa		32.75	■■■□□ 2.83
NFRKB-204	ENST00000526884	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.75	■■■□□ 2.83
NFRKB-204	ENST00000526884	RGPD4	Q7Z3J3	1758 aa		32.75	■■■□□ 2.83
NFRKB-204	ENST00000526884	KIF7	Q2M1P5	1343 aa		32.75	■■■□□ 2.83
NFRKB-204	ENST00000526884	INSR	P06213	1382 aa		32.73	■■■□□ 2.83
NFRKB-204	ENST00000526884	IL2RB	P14784	551 aa		32.73	■■■□□ 2.83
NFRKB-204	ENST00000526884	FBLN1	P23142	703 aa		32.73	■■■□□ 2.83
NFRKB-204	ENST00000526884	DEFB132	Q7Z7B7	95 aa		32.72	■■■□□ 2.83
NFRKB-204	ENST00000526884	EXOC5	O00471	708 aa		32.71	■■■□□ 2.83
NFRKB-204	ENST00000526884	PARD3	Q8TEW0	1356 aa		32.7	■■■□□ 2.82
NFRKB-204	ENST00000526884	TRIM37	O94972	964 aa		32.69	■■■□□ 2.82
NFRKB-204	ENST00000526884	RREB1	Q92766	1687 aa		32.69	■■■□□ 2.82
NFRKB-204	ENST00000526884	LTV1	Q96GA3	475 aa	Predicted RBP	32.68	■■■□□ 2.82
NFRKB-204	ENST00000526884	MARCH10	Q8NA82	808 aa	Predicted RBP	32.65	■■■□□ 2.82
NFRKB-204	ENST00000526884	NHS	Q6T4R5	1651 aa		32.65	■■■□□ 2.82
NFRKB-204	ENST00000526884	SHANK3	Q9BYB0	1731 aa		32.64	■■■□□ 2.82
NFRKB-204	ENST00000526884	KNSTRN	Q9Y448	316 aa		32.64	■■■□□ 2.82
NFRKB-204	ENST00000526884	EMILIN1	Q9Y6C2	1016 aa		32.62	■■■□□ 2.81
NFRKB-204	ENST00000526884	HSP90AB2P	Q58FF8	381 aa		32.61	■■■□□ 2.81
NFRKB-204	ENST00000526884	KAT6B	Q8WYB5	2073 aa		32.61	■■■□□ 2.81
NFRKB-204	ENST00000526884	WASHC2A	Q641Q2	1341 aa		32.6	■■■□□ 2.81
NFRKB-204	ENST00000526884	EN1	Q05925	392 aa	Predicted RBP	32.6	■■■□□ 2.81
NFRKB-204	ENST00000526884	APBA3	O96018	575 aa		32.59	■■■□□ 2.81
NFRKB-204	ENST00000526884	NUP188	Q5SRE5	1749 aa		32.59	■■■□□ 2.81
NFRKB-204	ENST00000526884	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.57	■■■□□ 2.8
NFRKB-204	ENST00000526884	POLK	Q9UBT6	870 aa		32.57	■■■□□ 2.8
NFRKB-204	ENST00000526884	NCAPD2	Q15021	1401 aa		32.57	■■■□□ 2.8
NFRKB-204	ENST00000526884	MEGF6	O75095	1541 aa		32.56	■■■□□ 2.8
NFRKB-204	ENST00000526884	NBPF6	Q5VWK0	638 aa		32.56	■■■□□ 2.8
NFRKB-204	ENST00000526884	NBPF4	Q96M43	638 aa		32.56	■■■□□ 2.8
NFRKB-204	ENST00000526884	CAMKK2	Q96RR4	588 aa		32.56	■■■□□ 2.8
NFRKB-204	ENST00000526884	PKD1L3	Q7Z443	1732 aa		32.54	■■■□□ 2.8
NFRKB-204	ENST00000526884	PPM1G	O15355	546 aa	Predicted RBP	32.53	■■■□□ 2.8
NFRKB-204	ENST00000526884	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.52	■■■□□ 2.8
NFRKB-204	ENST00000526884	MORC1	Q86VD1	984 aa		32.52	■■■□□ 2.8
NFRKB-204	ENST00000526884	BTAF1	O14981	1849 aa		32.51	■■■□□ 2.8
NFRKB-204	ENST00000526884	EZH2	Q15910	746 aa	Known RBP	32.51	■■■□□ 2.79
NFRKB-204	ENST00000526884	RAPGEF4	Q8WZA2	1011 aa		32.51	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms