RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 DHX16O60231 1041 aaKnown RBP9.06□□□□□ -0.96
LRRK1-205ENST00000526457 STK38Q15208 465 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 NUP155O75694 1391 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 CEP83Q9Y592 693 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 BMS1Q14692 1282 aaKnown RBP9.06□□□□□ -0.96
LRRK1-205ENST00000526457 DZIP1LQ8IYY4 767 aaKnown RBP9.06□□□□□ -0.96
LRRK1-205ENST00000526457 HECW1Q76N89 1606 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 CEBPZQ03701 1054 aaKnown RBP9.06□□□□□ -0.96
LRRK1-205ENST00000526457 TAF4BQ92750 862 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 POTEB2H3BUK9 544 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 C16orf45Q96MC5 204 aaPredicted RBP9.06□□□□□ -0.96
LRRK1-205ENST00000526457 SRRTQ9BXP5 876 aaKnown RBP9.06□□□□□ -0.96
LRRK1-205ENST00000526457 RSPH14Q9UHP6 348 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 SYCE3A1L190 88 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 KIF3BO15066 747 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 UBE4AQ14139 1066 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 CEP57L1Q8IYX8 460 aa9.06□□□□□ -0.96
LRRK1-205ENST00000526457 ERICH2A1L162 156 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 SFPQP23246 707 aaKnown RBP eCLIP9.05□□□□□ -0.96
LRRK1-205ENST00000526457 PSMA5P28066 241 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 MSL1Q68DK7 614 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 MIPOL1Q8TD10 442 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 DACH1Q9UI36 760 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 FAM184BQ9ULE4 1060 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 RALYLQ86SE5 291 aaKnown RBP9.05□□□□□ -0.96
LRRK1-205ENST00000526457 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
LRRK1-205ENST00000526457 KIF21AQ7Z4S6 1674 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 NEK4P51957 841 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 USP47Q96K76 1375 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 JMYQ8N9B5 988 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 KIF3CO14782 793 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 KIF5CO60282 957 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 C6orf163Q5TEZ5 329 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 AMOTL1Q8IY63 956 aa9.05□□□□□ -0.96
LRRK1-205ENST00000526457 MCM5P33992 734 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 RAI14Q9P0K7 980 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 BRD4O60885 1362 aaPredicted RBP9.04□□□□□ -0.96
LRRK1-205ENST00000526457 RSRC1Q96IZ7 334 aaKnown RBP9.04□□□□□ -0.96
LRRK1-205ENST00000526457 CIZ1Q9ULV3 898 aaPredicted RBP9.04□□□□□ -0.96
LRRK1-205ENST00000526457 CCDC94Q9BW85 323 aaPredicted RBP9.04□□□□□ -0.96
LRRK1-205ENST00000526457 CCDC6Q16204 474 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 RASSF4Q9H2L5 321 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 TOP2BQ02880 1626 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 ZSCAN12O43309 604 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 URI1O94763 535 aaPredicted RBP9.04□□□□□ -0.96
LRRK1-205ENST00000526457 ME1P48163 572 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 PRIMPOLQ96LW4 560 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 SCLT1Q96NL6 688 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 G3V3G9 751 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 RAD21O60216 631 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 DCAF8Q5TAQ9 597 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 IMMTQ16891 758 aaKnown RBP9.04□□□□□ -0.96
LRRK1-205ENST00000526457 XBP1P17861 261 aa9.04□□□□□ -0.96
LRRK1-205ENST00000526457 ERC2O15083 957 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 KRT85P78386 507 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 MYOM3Q5VTT5 1437 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 PKD2Q13563 968 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 EHBP1L1Q8N3D4 1523 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 GCOM1H8Y6P7 765 aaPredicted RBP9.03□□□□□ -0.96
LRRK1-205ENST00000526457 ATP2C2O75185 946 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 MYZAPP0CAP1 466 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 NUP62CLQ9H1M0 184 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 FOXD1Q16676 465 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 NUP133Q8WUM0 1156 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 HYPKQ9NX55 129 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 C10orf67Q8IYJ2 551 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 UPF3BQ9BZI7 483 aaKnown RBP9.03□□□□□ -0.96
LRRK1-205ENST00000526457 PAF1Q8N7H5 531 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 CDK5RAP3Q96JB5 506 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 PRKRIP1Q9H875 184 aaPredicted RBP9.03□□□□□ -0.96
LRRK1-205ENST00000526457 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
LRRK1-205ENST00000526457 K7ELQ4 463 aaPredicted RBP9.02□□□□□ -0.96
LRRK1-205ENST00000526457 FBF1Q8TES7 1133 aa9.02□□□□□ -0.96
LRRK1-205ENST00000526457 C9orf78Q9NZ63 289 aaPredicted RBP9.02□□□□□ -0.96
LRRK1-205ENST00000526457 BACH2Q9BYV9 841 aa9.02□□□□□ -0.96
LRRK1-205ENST00000526457 A0A1B0GUA9 196 aa9.02□□□□□ -0.97
LRRK1-205ENST00000526457 BANK1Q8NDB2 785 aa9.02□□□□□ -0.97
LRRK1-205ENST00000526457 DDX23Q9BUQ8 820 aaKnown RBP9.02□□□□□ -0.97
LRRK1-205ENST00000526457 SMAP1Q8IYB5 467 aaPredicted RBP9.02□□□□□ -0.97
LRRK1-205ENST00000526457 MAP3K11Q16584 847 aa9.02□□□□□ -0.97
LRRK1-205ENST00000526457 ATP2B1P20020 1258 aa9.02□□□□□ -0.97
LRRK1-205ENST00000526457 RNF168Q8IYW5 571 aaPredicted RBP9.02□□□□□ -0.97
LRRK1-205ENST00000526457 A0A1B0GUL7 405 aa9.02□□□□□ -0.97
LRRK1-205ENST00000526457 ZFYP08048 801 aaPredicted RBP9.02□□□□□ -0.97
LRRK1-205ENST00000526457 CEP112Q8N8E3 955 aa9.02□□□□□ -0.97
LRRK1-205ENST00000526457 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.97
LRRK1-205ENST00000526457 STK26Q9P289 416 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 ITSN2Q9NZM3 1697 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 KIF4BQ2VIQ3 1234 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 MRVI1Q9Y6F6 885 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
LRRK1-205ENST00000526457 PUS7Q96PZ0 661 aaKnown RBP9.01□□□□□ -0.97
LRRK1-205ENST00000526457 SERPINA10Q9UK55 444 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 KIF5BP33176 963 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 CLNS1AP54105 237 aaKnown RBP9.01□□□□□ -0.97
LRRK1-205ENST00000526457 LIG1P18858 919 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 PANK1Q8TE04 598 aa9.01□□□□□ -0.97
LRRK1-205ENST00000526457 RRBP1Q9P2E9 1410 aaKnown RBP9.01□□□□□ -0.97
LRRK1-205ENST00000526457 CFAP100Q494V2 611 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms