RNA–Protein interactions for RNA: ENST00000526369.3

PPFIA1-208, Transcript of PTPRF interacting protein alpha 1, human

TSL 4

Gene PPFIA1, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-208	ENST00000526369	MRS2	Q9HD23	443 aa		14.08	□□□□□ -0.16
PPFIA1-208	ENST00000526369	NSD3	Q9BZ95	1437 aa		14.07	□□□□□ -0.16
PPFIA1-208	ENST00000526369	PLEKHG3	A1L390	1219 aa		14.07	□□□□□ -0.16
PPFIA1-208	ENST00000526369	CNGB1	Q14028	1251 aa	Predicted RBP	14.07	□□□□□ -0.16
PPFIA1-208	ENST00000526369	BRD4	O60885	1362 aa	Predicted RBP	14.07	□□□□□ -0.16
PPFIA1-208	ENST00000526369	ITSN1	Q15811	1721 aa		14.07	□□□□□ -0.16
PPFIA1-208	ENST00000526369	CABP2	Q9NPB3	220 aa		14.06	□□□□□ -0.16
PPFIA1-208	ENST00000526369	PPP1R1B	Q9UD71	204 aa	Predicted RBP	14.06	□□□□□ -0.16
PPFIA1-208	ENST00000526369	POLR3A	O14802	1390 aa	Predicted RBP	14.06	□□□□□ -0.16
PPFIA1-208	ENST00000526369	NSD2	O96028	1365 aa		14.06	□□□□□ -0.16
PPFIA1-208	ENST00000526369	GC	P02774	474 aa		14.05	□□□□□ -0.16
PPFIA1-208	ENST00000526369	NLRP13	Q86W25	1043 aa		14.05	□□□□□ -0.16
PPFIA1-208	ENST00000526369	TNS1	Q9HBL0	1735 aa	Known RBP	14.04	□□□□□ -0.16
PPFIA1-208	ENST00000526369	YY1	P25490	414 aa		14.04	□□□□□ -0.16
PPFIA1-208	ENST00000526369	CC2D1B	Q5T0F9	858 aa	Known RBP	14.04	□□□□□ -0.16
PPFIA1-208	ENST00000526369	TERF2IP	Q9NYB0	399 aa		14.04	□□□□□ -0.16
PPFIA1-208	ENST00000526369	TOPAZ1	Q8N9V7	1692 aa		14.04	□□□□□ -0.16
PPFIA1-208	ENST00000526369	CAMTA1	Q9Y6Y1	1673 aa		14.04	□□□□□ -0.16
PPFIA1-208	ENST00000526369	CRYBG1	Q9Y4K1	1723 aa		14.04	□□□□□ -0.16
PPFIA1-208	ENST00000526369	PER1	O15534	1290 aa	Predicted RBP	14.03	□□□□□ -0.16
PPFIA1-208	ENST00000526369	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14.03	□□□□□ -0.16
PPFIA1-208	ENST00000526369	THRAP3	Q9Y2W1	955 aa	Known RBP	14.03	□□□□□ -0.16
PPFIA1-208	ENST00000526369	CGNL1	Q0VF96	1302 aa		14.03	□□□□□ -0.16
PPFIA1-208	ENST00000526369	KIF20B	Q96Q89	1820 aa		14.03	□□□□□ -0.16
PPFIA1-208	ENST00000526369	ANKRD26	Q9UPS8	1709 aa		14.02	□□□□□ -0.16
PPFIA1-208	ENST00000526369	PHRF1	Q9P1Y6	1649 aa	Known RBP	14.02	□□□□□ -0.16
PPFIA1-208	ENST00000526369		A0A1W2PP64	1363 aa		14.02	□□□□□ -0.17
PPFIA1-208	ENST00000526369	CPD	O75976	1380 aa		14.02	□□□□□ -0.17
PPFIA1-208	ENST00000526369	USP19	O94966	1318 aa		14.02	□□□□□ -0.17
PPFIA1-208	ENST00000526369	NLRP6	P59044	892 aa		14.02	□□□□□ -0.17
PPFIA1-208	ENST00000526369	SPON1	Q9HCB6	807 aa		14.02	□□□□□ -0.17
PPFIA1-208	ENST00000526369	PPIP5K1	Q6PFW1	1433 aa		14.01	□□□□□ -0.17
PPFIA1-208	ENST00000526369	KCNQ2	O43526	872 aa		14.01	□□□□□ -0.17
PPFIA1-208	ENST00000526369	CABP1	Q9NZU7	370 aa		14.01	□□□□□ -0.17
PPFIA1-208	ENST00000526369	DCAF8L1	A6NGE4	600 aa		14	□□□□□ -0.17
PPFIA1-208	ENST00000526369	AMER1	Q5JTC6	1135 aa	Predicted RBP	14	□□□□□ -0.17
PPFIA1-208	ENST00000526369	TOM1L2	Q6ZVM7	507 aa		14	□□□□□ -0.17
PPFIA1-208	ENST00000526369	MON2	Q7Z3U7	1717 aa		13.99	□□□□□ -0.17
PPFIA1-208	ENST00000526369	SOX12	O15370	315 aa		13.99	□□□□□ -0.17
PPFIA1-208	ENST00000526369	DDB1	Q16531	1140 aa		13.99	□□□□□ -0.17
PPFIA1-208	ENST00000526369	PTF1A	Q7RTS3	328 aa		13.99	□□□□□ -0.17
PPFIA1-208	ENST00000526369	SLC12A5	Q9H2X9	1139 aa		13.99	□□□□□ -0.17
PPFIA1-208	ENST00000526369	NRK	Q7Z2Y5	1582 aa		13.99	□□□□□ -0.17
PPFIA1-208	ENST00000526369	AKAP12	Q02952	1782 aa		13.99	□□□□□ -0.17
PPFIA1-208	ENST00000526369	COL5A2	P05997	1499 aa	Predicted RBP	13.98	□□□□□ -0.17
PPFIA1-208	ENST00000526369	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.97	□□□□□ -0.17
PPFIA1-208	ENST00000526369	CD163L1	Q9NR16	1453 aa		13.97	□□□□□ -0.17
PPFIA1-208	ENST00000526369	CRB1	P82279	1406 aa		13.97	□□□□□ -0.17
PPFIA1-208	ENST00000526369	EDC4	Q6P2E9	1401 aa	Known RBP	13.97	□□□□□ -0.17
PPFIA1-208	ENST00000526369	CSB-PGBD3	P0DP91	1061 aa		13.96	□□□□□ -0.17
PPFIA1-208	ENST00000526369	AXIN2	Q9Y2T1	843 aa		13.96	□□□□□ -0.17
PPFIA1-208	ENST00000526369	OVOS2	A0A0G2JMS6	1433 aa		13.96	□□□□□ -0.18
PPFIA1-208	ENST00000526369	OVOS2	A0A0J9YW53	1432 aa		13.96	□□□□□ -0.18
PPFIA1-208	ENST00000526369	OVOS2	Q6IE36	1432 aa		13.96	□□□□□ -0.18
PPFIA1-208	ENST00000526369	ZBTB7A	O95365	584 aa		13.95	□□□□□ -0.18
PPFIA1-208	ENST00000526369	FAM9B	Q8IZU0	186 aa		13.95	□□□□□ -0.18
PPFIA1-208	ENST00000526369	MARCH10	Q8NA82	808 aa	Predicted RBP	13.95	□□□□□ -0.18
PPFIA1-208	ENST00000526369	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.95	□□□□□ -0.18
PPFIA1-208	ENST00000526369	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.95	□□□□□ -0.18
PPFIA1-208	ENST00000526369	AATK	Q6ZMQ8	1374 aa		13.95	□□□□□ -0.18
PPFIA1-208	ENST00000526369	PLSCR1	O15162	318 aa		13.94	□□□□□ -0.18
PPFIA1-208	ENST00000526369	MORC1	Q86VD1	984 aa		13.94	□□□□□ -0.18
PPFIA1-208	ENST00000526369	LMO7	Q8WWI1	1683 aa		13.94	□□□□□ -0.18
PPFIA1-208	ENST00000526369	NUP188	Q5SRE5	1749 aa		13.93	□□□□□ -0.18
PPFIA1-208	ENST00000526369	USP6	P35125	1406 aa		13.93	□□□□□ -0.18
PPFIA1-208	ENST00000526369	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
PPFIA1-208	ENST00000526369	PROM2	Q8N271	834 aa		13.93	□□□□□ -0.18
PPFIA1-208	ENST00000526369	CARD14	Q9BXL6	1004 aa		13.93	□□□□□ -0.18
PPFIA1-208	ENST00000526369	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.93	□□□□□ -0.18
PPFIA1-208	ENST00000526369	RREB1	Q92766	1687 aa		13.92	□□□□□ -0.18
PPFIA1-208	ENST00000526369	CPSF1	Q10570	1443 aa	Known RBP	13.92	□□□□□ -0.18
PPFIA1-208	ENST00000526369	WDR17	Q8IZU2	1322 aa		13.91	□□□□□ -0.18
PPFIA1-208	ENST00000526369	PPP2R1A	P30153	589 aa		13.91	□□□□□ -0.18
PPFIA1-208	ENST00000526369	CCDC184	Q52MB2	194 aa		13.91	□□□□□ -0.18
PPFIA1-208	ENST00000526369	STK32B	Q9NY57	414 aa		13.91	□□□□□ -0.18
PPFIA1-208	ENST00000526369	INSR	P06213	1382 aa		13.91	□□□□□ -0.18
PPFIA1-208	ENST00000526369	EXOC5	O00471	708 aa		13.9	□□□□□ -0.18
PPFIA1-208	ENST00000526369	WDR43	Q15061	677 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
PPFIA1-208	ENST00000526369	ARHGEF25	Q86VW2	580 aa		13.9	□□□□□ -0.18
PPFIA1-208	ENST00000526369	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.9	□□□□□ -0.18
PPFIA1-208	ENST00000526369	TTC21B	Q7Z4L5	1316 aa		13.9	□□□□□ -0.19
PPFIA1-208	ENST00000526369	TXNRD1	Q16881	649 aa		13.89	□□□□□ -0.19
PPFIA1-208	ENST00000526369	KCNH5	Q8NCM2	988 aa		13.89	□□□□□ -0.19
PPFIA1-208	ENST00000526369	CARD10	Q9BWT7	1032 aa		13.89	□□□□□ -0.19
PPFIA1-208	ENST00000526369	PARP4	Q9UKK3	1724 aa	Known RBP	13.88	□□□□□ -0.19
PPFIA1-208	ENST00000526369	ACSBG1	Q96GR2	724 aa		13.88	□□□□□ -0.19
PPFIA1-208	ENST00000526369	CFAP53	Q96M91	514 aa		13.88	□□□□□ -0.19
PPFIA1-208	ENST00000526369	ZNF692	Q9BU19	519 aa	Predicted RBP	13.88	□□□□□ -0.19
PPFIA1-208	ENST00000526369	SLIT3	O75094	1523 aa		13.87	□□□□□ -0.19
PPFIA1-208	ENST00000526369	PTGER2	P43116	358 aa		13.87	□□□□□ -0.19
PPFIA1-208	ENST00000526369	ZBED9	Q6R2W3	1325 aa		13.87	□□□□□ -0.19
PPFIA1-208	ENST00000526369	SLC15A2	Q16348	729 aa		13.86	□□□□□ -0.19
PPFIA1-208	ENST00000526369	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PPFIA1-208	ENST00000526369	PNISR	Q8TF01	805 aa	Known RBP	13.86	□□□□□ -0.19
PPFIA1-208	ENST00000526369	LRRC37A3	O60309	1634 aa		13.86	□□□□□ -0.19
PPFIA1-208	ENST00000526369	PEAK1	Q9H792	1746 aa		13.85	□□□□□ -0.19
PPFIA1-208	ENST00000526369	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.85	□□□□□ -0.19
PPFIA1-208	ENST00000526369	NLRP2	Q9NX02	1062 aa		13.85	□□□□□ -0.19
PPFIA1-208	ENST00000526369	GGNBP2	Q9H3C7	697 aa		13.84	□□□□□ -0.19
PPFIA1-208	ENST00000526369	TTC21A	Q8NDW8	1320 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms