RNA–Protein interactions for RNA: ENST00000525535.2

PAX6-220, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-220ENST00000525535 VPS8Q8N3P4 1428 aa10□□□□□ -0.81
PAX6-220ENST00000525535 NDUFV2P19404 249 aa10□□□□□ -0.81
PAX6-220ENST00000525535 MEX3CQ5U5Q3 659 aaKnown RBP10□□□□□ -0.81
PAX6-220ENST00000525535 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
PAX6-220ENST00000525535 LIMD1Q9UGP4 676 aa10□□□□□ -0.81
PAX6-220ENST00000525535 VWDEQ8N2E2 1590 aa10□□□□□ -0.81
PAX6-220ENST00000525535 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
PAX6-220ENST00000525535 SPTLC1O15269 473 aa9.99□□□□□ -0.81
PAX6-220ENST00000525535 HOXA2O43364 376 aa9.99□□□□□ -0.81
PAX6-220ENST00000525535 FUT2Q10981 343 aa9.99□□□□□ -0.81
PAX6-220ENST00000525535 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
PAX6-220ENST00000525535 ATP1B4Q9UN42 357 aaPredicted RBP9.99□□□□□ -0.81
PAX6-220ENST00000525535 ATAD2Q6PL18 1390 aa9.99□□□□□ -0.81
PAX6-220ENST00000525535 NHSL1Q5SYE7 1610 aa9.98□□□□□ -0.81
PAX6-220ENST00000525535 APLP1P51693 650 aa9.98□□□□□ -0.81
PAX6-220ENST00000525535 FYCO1Q9BQS8 1478 aa9.98□□□□□ -0.81
PAX6-220ENST00000525535 LRP6O75581 1613 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 HECW1Q76N89 1606 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 GJA5P36382 358 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 ATP6V1AP38606 617 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 HLA-CQ95604 372 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
PAX6-220ENST00000525535 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 ATP10AO60312 1499 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 NUP153P49790 1475 aaKnown RBP9.97□□□□□ -0.81
PAX6-220ENST00000525535 MAGI2Q86UL8 1455 aa9.97□□□□□ -0.81
PAX6-220ENST00000525535 ZNF142P52746 1687 aaPredicted RBP9.96□□□□□ -0.81
PAX6-220ENST00000525535 STRCP1A6NGW2 1772 aa9.96□□□□□ -0.81
PAX6-220ENST00000525535 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
PAX6-220ENST00000525535 C9orf84Q5VXU9 1444 aa9.96□□□□□ -0.82
PAX6-220ENST00000525535 FDX1P10109 184 aa9.95□□□□□ -0.82
PAX6-220ENST00000525535 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
PAX6-220ENST00000525535 PCDHB15Q9Y5E8 787 aa9.95□□□□□ -0.82
PAX6-220ENST00000525535 FAM135BQ49AJ0 1406 aa9.95□□□□□ -0.82
PAX6-220ENST00000525535 POLR1AO95602 1720 aaPredicted RBP9.94□□□□□ -0.82
PAX6-220ENST00000525535 ATP10BO94823 1461 aa9.94□□□□□ -0.82
PAX6-220ENST00000525535 NR1I2O75469 434 aa9.94□□□□□ -0.82
PAX6-220ENST00000525535 TUSC1Q2TAM9 212 aa9.94□□□□□ -0.82
PAX6-220ENST00000525535 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
PAX6-220ENST00000525535 ESF1Q9H501 851 aaKnown RBP9.94□□□□□ -0.82
PAX6-220ENST00000525535 JCADQ9P266 1359 aa9.93□□□□□ -0.82
PAX6-220ENST00000525535 HRCP23327 699 aa9.93□□□□□ -0.82
PAX6-220ENST00000525535 PCDHGC3Q9UN70 934 aa9.93□□□□□ -0.82
PAX6-220ENST00000525535 MYO3AQ8NEV4 1616 aa9.93□□□□□ -0.82
PAX6-220ENST00000525535 NEURL4Q96JN8 1562 aa9.92□□□□□ -0.82
PAX6-220ENST00000525535 CEP170BQ9Y4F5 1589 aaPredicted RBP9.92□□□□□ -0.82
PAX6-220ENST00000525535 CCDC18Q5T9S5 1454 aa9.92□□□□□ -0.82
PAX6-220ENST00000525535 Q3C1V9 767 aa9.92□□□□□ -0.82
PAX6-220ENST00000525535 MORN1Q5T089 497 aa9.92□□□□□ -0.82
PAX6-220ENST00000525535 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
PAX6-220ENST00000525535 ROBO1Q9Y6N7 1651 aa9.92□□□□□ -0.82
PAX6-220ENST00000525535 MAP3K1Q13233 1512 aa9.92□□□□□ -0.82
PAX6-220ENST00000525535 QPCTQ16769 361 aa9.91□□□□□ -0.82
PAX6-220ENST00000525535 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
PAX6-220ENST00000525535 CDK11AQ9UQ88 783 aaPredicted RBP9.91□□□□□ -0.82
PAX6-220ENST00000525535 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
PAX6-220ENST00000525535 NPATQ14207 1427 aa9.9□□□□□ -0.82
PAX6-220ENST00000525535 PRELPP51888 382 aa9.9□□□□□ -0.82
PAX6-220ENST00000525535 CDK13Q14004 1512 aaKnown RBP9.9□□□□□ -0.82
PAX6-220ENST00000525535 UTRNP46939 3433 aa9.9□□□□□ -0.82
PAX6-220ENST00000525535 PLEKHD1A6NEE1 506 aa9.89□□□□□ -0.83
PAX6-220ENST00000525535 ARID3CA6NKF2 412 aa9.89□□□□□ -0.83
PAX6-220ENST00000525535 LILRB3O75022 631 aa9.89□□□□□ -0.83
PAX6-220ENST00000525535 ITGBL1O95965 494 aaPredicted RBP9.89□□□□□ -0.83
PAX6-220ENST00000525535 CABLES1Q8TDN4 633 aa9.89□□□□□ -0.83
PAX6-220ENST00000525535 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
PAX6-220ENST00000525535 PHLPP1O60346 1717 aa9.89□□□□□ -0.83
PAX6-220ENST00000525535 SYNMO15061 1565 aa9.88□□□□□ -0.83
PAX6-220ENST00000525535 RBM6P78332 1123 aaKnown RBP9.88□□□□□ -0.83
PAX6-220ENST00000525535 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
PAX6-220ENST00000525535 PPP2R2DQ66LE6 453 aa9.88□□□□□ -0.83
PAX6-220ENST00000525535 CCDC125Q86Z20 511 aa9.88□□□□□ -0.83
PAX6-220ENST00000525535 MTRQ99707 1265 aa9.88□□□□□ -0.83
PAX6-220ENST00000525535 ZBTB3Q9H5J0 574 aa9.88□□□□□ -0.83
PAX6-220ENST00000525535 XIRP1Q702N8 1843 aaKnown RBP9.87□□□□□ -0.83
PAX6-220ENST00000525535 RFC5P40937 340 aa9.87□□□□□ -0.83
PAX6-220ENST00000525535 KCNC4Q03721 635 aa9.87□□□□□ -0.83
PAX6-220ENST00000525535 TJAP1Q5JTD0 557 aa9.87□□□□□ -0.83
PAX6-220ENST00000525535 BLOC1S3Q6QNY0 202 aa9.87□□□□□ -0.83
PAX6-220ENST00000525535 LRRIQ1Q96JM4 1722 aa9.87□□□□□ -0.83
PAX6-220ENST00000525535 AFF2P51816 1311 aa9.86□□□□□ -0.83
PAX6-220ENST00000525535 TIAM1Q13009 1591 aa9.86□□□□□ -0.83
PAX6-220ENST00000525535 RTL5Q5HYW3 569 aaPredicted RBP9.86□□□□□ -0.83
PAX6-220ENST00000525535 SCUBE3Q8IX30 993 aa9.86□□□□□ -0.83
PAX6-220ENST00000525535 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
PAX6-220ENST00000525535 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
PAX6-220ENST00000525535 TROQ12816 1431 aaPredicted RBP9.85□□□□□ -0.83
PAX6-220ENST00000525535 SPDYE5A6NIY4 337 aa9.85□□□□□ -0.83
PAX6-220ENST00000525535 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
PAX6-220ENST00000525535 ZPR1O75312 459 aa9.85□□□□□ -0.83
PAX6-220ENST00000525535 FMNL1O95466 1100 aaPredicted RBP9.85□□□□□ -0.83
PAX6-220ENST00000525535 MTMR2Q13614 643 aa9.85□□□□□ -0.83
PAX6-220ENST00000525535 COPS2P61201 443 aa9.84□□□□□ -0.83
PAX6-220ENST00000525535 QTRT2Q9H974 415 aaKnown RBP9.84□□□□□ -0.83
PAX6-220ENST00000525535 MTUS2Q5JR59 1369 aa9.84□□□□□ -0.83
PAX6-220ENST00000525535 LRRC9Q6ZRR7 1453 aa9.84□□□□□ -0.83
PAX6-220ENST00000525535 BCL9LQ86UU0 1499 aa9.84□□□□□ -0.83
PAX6-220ENST00000525535 SPATA31A6Q5VVP1 1343 aa9.83□□□□□ -0.84
PAX6-220ENST00000525535 KANK4Q5T7N3 995 aaPredicted RBP9.83□□□□□ -0.84
PAX6-220ENST00000525535 RNF19BQ6ZMZ0 732 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms