RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 HOXC9P31274 260 aa18.99■□□□□ 0.63
UBXN1-205ENST00000525004 MTHFSP49914 203 aa18.99■□□□□ 0.63
UBXN1-205ENST00000525004 CNGB1Q14028 1251 aaPredicted RBP18.99■□□□□ 0.63
UBXN1-205ENST00000525004 FNBP4Q8N3X1 1017 aaPredicted RBP18.99■□□□□ 0.63
UBXN1-205ENST00000525004 AXIN2Q9Y2T1 843 aa18.99■□□□□ 0.63
UBXN1-205ENST00000525004 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
UBXN1-205ENST00000525004 CAMTA1Q9Y6Y1 1673 aa18.98■□□□□ 0.63
UBXN1-205ENST00000525004 BLMP54132 1417 aaPredicted RBP18.98■□□□□ 0.63
UBXN1-205ENST00000525004 PLCH1Q4KWH8 1693 aa18.98■□□□□ 0.63
UBXN1-205ENST00000525004 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
UBXN1-205ENST00000525004 CHRNA2Q15822 529 aa18.97■□□□□ 0.63
UBXN1-205ENST00000525004 AMPHP49418 695 aa18.96■□□□□ 0.63
UBXN1-205ENST00000525004 NRAPQ86VF7 1730 aa18.95■□□□□ 0.62
UBXN1-205ENST00000525004 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.94■□□□□ 0.62
UBXN1-205ENST00000525004 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
UBXN1-205ENST00000525004 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
UBXN1-205ENST00000525004 COL3A1P02461 1466 aaPredicted RBP18.93■□□□□ 0.62
UBXN1-205ENST00000525004 COL5A2P05997 1499 aaPredicted RBP18.93■□□□□ 0.62
UBXN1-205ENST00000525004 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
UBXN1-205ENST00000525004 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
UBXN1-205ENST00000525004 C8orf37Q96NL8 207 aa18.92■□□□□ 0.62
UBXN1-205ENST00000525004 ERBB3P21860 1342 aa18.92■□□□□ 0.62
UBXN1-205ENST00000525004 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
UBXN1-205ENST00000525004 MEX3CQ5U5Q3 659 aaKnown RBP18.91■□□□□ 0.62
UBXN1-205ENST00000525004 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
UBXN1-205ENST00000525004 UNC5CLQ8IV45 518 aa18.9■□□□□ 0.62
UBXN1-205ENST00000525004 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
UBXN1-205ENST00000525004 ZBTB7CA1YPR0 619 aa18.89■□□□□ 0.61
UBXN1-205ENST00000525004 IL13P35225 146 aa18.89■□□□□ 0.61
UBXN1-205ENST00000525004 EIF4A2Q14240 407 aaKnown RBP18.88■□□□□ 0.61
UBXN1-205ENST00000525004 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
UBXN1-205ENST00000525004 CFAP53Q96M91 514 aa18.88■□□□□ 0.61
UBXN1-205ENST00000525004 AFF2P51816 1311 aa18.88■□□□□ 0.61
UBXN1-205ENST00000525004 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
UBXN1-205ENST00000525004 RGPD1P0DJD0 1748 aa18.88■□□□□ 0.61
UBXN1-205ENST00000525004 USP21Q9UK80 565 aa18.87■□□□□ 0.61
UBXN1-205ENST00000525004 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
UBXN1-205ENST00000525004 DIAPH1O60610 1272 aaKnown RBP18.86■□□□□ 0.61
UBXN1-205ENST00000525004 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
UBXN1-205ENST00000525004 EVA1CP58658 441 aa18.85■□□□□ 0.61
UBXN1-205ENST00000525004 VPS72Q15906 364 aa18.85■□□□□ 0.61
UBXN1-205ENST00000525004 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
UBXN1-205ENST00000525004 MIER1Q8N108 512 aa18.85■□□□□ 0.61
UBXN1-205ENST00000525004 CRB1P82279 1406 aa18.84■□□□□ 0.61
UBXN1-205ENST00000525004 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
UBXN1-205ENST00000525004 LARP1Q6PKG0 1096 aaKnown RBP18.84■□□□□ 0.61
UBXN1-205ENST00000525004 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
UBXN1-205ENST00000525004 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
UBXN1-205ENST00000525004 RGS17Q9UGC6 210 aaPredicted RBP18.84■□□□□ 0.61
UBXN1-205ENST00000525004 ATRNO75882 1429 aa18.83■□□□□ 0.61
UBXN1-205ENST00000525004 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.61
UBXN1-205ENST00000525004 ZNF772Q68DY9 489 aaPredicted RBP18.83■□□□□ 0.6
UBXN1-205ENST00000525004 EYA1Q99502 592 aa18.83■□□□□ 0.6
UBXN1-205ENST00000525004 STRN4Q9NRL3 753 aa18.83■□□□□ 0.6
UBXN1-205ENST00000525004 SPATA31A5Q5VU36 1347 aa18.82■□□□□ 0.6
UBXN1-205ENST00000525004 SPATA31A7Q8IWB4 1347 aa18.82■□□□□ 0.6
UBXN1-205ENST00000525004 LTV1Q96GA3 475 aaPredicted RBP18.82■□□□□ 0.6
UBXN1-205ENST00000525004 SPATA31A1Q5TZJ5 1347 aa18.81■□□□□ 0.6
UBXN1-205ENST00000525004 TRPC5Q9UL62 973 aaPredicted RBP18.81■□□□□ 0.6
UBXN1-205ENST00000525004 KDRP35968 1356 aa18.81■□□□□ 0.6
UBXN1-205ENST00000525004 TOM1L2Q6ZVM7 507 aa18.8■□□□□ 0.6
UBXN1-205ENST00000525004 NUDCQ9Y266 331 aa18.8■□□□□ 0.6
UBXN1-205ENST00000525004 THRAP3Q9Y2W1 955 aaKnown RBP18.8■□□□□ 0.6
UBXN1-205ENST00000525004 CSB-PGBD3P0DP91 1061 aa18.79■□□□□ 0.6
UBXN1-205ENST00000525004 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
UBXN1-205ENST00000525004 QTRT2Q9H974 415 aaKnown RBP18.79■□□□□ 0.6
UBXN1-205ENST00000525004 NLRP2Q9NX02 1062 aa18.79■□□□□ 0.6
UBXN1-205ENST00000525004 GLI3P10071 1580 aa18.78■□□□□ 0.6
UBXN1-205ENST00000525004 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
UBXN1-205ENST00000525004 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
UBXN1-205ENST00000525004 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
UBXN1-205ENST00000525004 WNK3Q9BYP7 1800 aa18.77■□□□□ 0.6
UBXN1-205ENST00000525004 ONECUT3O60422 494 aaPredicted RBP18.77■□□□□ 0.6
UBXN1-205ENST00000525004 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.6
UBXN1-205ENST00000525004 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.6
UBXN1-205ENST00000525004 FCHSD2O94868 740 aa18.75■□□□□ 0.59
UBXN1-205ENST00000525004 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
UBXN1-205ENST00000525004 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
UBXN1-205ENST00000525004 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
UBXN1-205ENST00000525004 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
UBXN1-205ENST00000525004 POTEAQ6S8J7 498 aa18.73■□□□□ 0.59
UBXN1-205ENST00000525004 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
UBXN1-205ENST00000525004 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
UBXN1-205ENST00000525004 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-205ENST00000525004 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
UBXN1-205ENST00000525004 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-205ENST00000525004 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
UBXN1-205ENST00000525004 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-205ENST00000525004 ADAMTS8Q9UP79 889 aa18.72■□□□□ 0.59
UBXN1-205ENST00000525004 THSD7AQ9UPZ6 1657 aa18.72■□□□□ 0.59
UBXN1-205ENST00000525004 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
UBXN1-205ENST00000525004 IL2RBP14784 551 aa18.71■□□□□ 0.59
UBXN1-205ENST00000525004 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
UBXN1-205ENST00000525004 CCDC9Q9Y3X0 531 aaKnown RBP18.71■□□□□ 0.59
UBXN1-205ENST00000525004 HMOX1P09601 288 aa18.7■□□□□ 0.58
UBXN1-205ENST00000525004 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
UBXN1-205ENST00000525004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
UBXN1-205ENST00000525004 MEGF6O75095 1541 aa18.69■□□□□ 0.58
UBXN1-205ENST00000525004 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
UBXN1-205ENST00000525004 OVOS2A0A0G2JMS6 1433 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms