RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 A0A0G2JS52 829 aa26.79■■□□□ 1.88
FBXO28-205ENST00000523990 MYT1Q01538 1121 aa26.79■■□□□ 1.88
FBXO28-205ENST00000523990 LARP1Q6PKG0 1096 aaKnown RBP26.79■■□□□ 1.88
FBXO28-205ENST00000523990 SOX12O15370 315 aa26.78■■□□□ 1.88
FBXO28-205ENST00000523990 CRB1P82279 1406 aa26.77■■□□□ 1.88
FBXO28-205ENST00000523990 CDCA8Q53HL2 280 aa26.77■■□□□ 1.88
FBXO28-205ENST00000523990 KRT27Q7Z3Y8 459 aa26.77■■□□□ 1.88
FBXO28-205ENST00000523990 USP35Q9P2H5 1018 aa26.74■■□□□ 1.87
FBXO28-205ENST00000523990 AXIN2Q9Y2T1 843 aa26.74■■□□□ 1.87
FBXO28-205ENST00000523990 BARGINQ6ZT62 677 aa26.73■■□□□ 1.87
FBXO28-205ENST00000523990 RGPD1P0DJD0 1748 aa26.72■■□□□ 1.87
FBXO28-205ENST00000523990 BLMP54132 1417 aaPredicted RBP26.72■■□□□ 1.87
FBXO28-205ENST00000523990 LRRC37A3O60309 1634 aa26.71■■□□□ 1.87
FBXO28-205ENST00000523990 CCDC125Q86Z20 511 aa26.71■■□□□ 1.87
FBXO28-205ENST00000523990 TCP11L2Q8N4U5 519 aa26.71■■□□□ 1.87
FBXO28-205ENST00000523990 EIF4G2P78344 907 aaKnown RBP eCLIP26.7■■□□□ 1.86
FBXO28-205ENST00000523990 THRAP3Q9Y2W1 955 aaKnown RBP26.7■■□□□ 1.86
FBXO28-205ENST00000523990 WDR17Q8IZU2 1322 aa26.7■■□□□ 1.86
FBXO28-205ENST00000523990 TNS1Q9HBL0 1735 aaKnown RBP26.69■■□□□ 1.86
FBXO28-205ENST00000523990 HSPA5P11021 654 aaKnown RBP26.67■■□□□ 1.86
FBXO28-205ENST00000523990 FAM208AQ9UK61 1670 aaKnown RBP26.66■■□□□ 1.86
FBXO28-205ENST00000523990 TOM1L2Q6ZVM7 507 aa26.65■■□□□ 1.86
FBXO28-205ENST00000523990 FAM182BQ5T319 152 aa26.64■■□□□ 1.85
FBXO28-205ENST00000523990 COG3Q96JB2 828 aa26.64■■□□□ 1.85
FBXO28-205ENST00000523990 NSD3Q9BZ95 1437 aa26.62■■□□□ 1.85
FBXO28-205ENST00000523990 PEAK1Q9H792 1746 aa26.62■■□□□ 1.85
FBXO28-205ENST00000523990 ERBB3P21860 1342 aa26.61■■□□□ 1.85
FBXO28-205ENST00000523990 FYB1O15117 783 aa26.6■■□□□ 1.85
FBXO28-205ENST00000523990 ANKRD26Q9UPS8 1709 aa26.6■■□□□ 1.85
FBXO28-205ENST00000523990 DISP2A7MBM2 1401 aa26.59■■□□□ 1.85
FBXO28-205ENST00000523990 CSB-PGBD3P0DP91 1061 aa26.59■■□□□ 1.85
FBXO28-205ENST00000523990 CARD10Q9BWT7 1032 aa26.59■■□□□ 1.85
FBXO28-205ENST00000523990 SBF2Q86WG5 1849 aa26.59■■□□□ 1.85
FBXO28-205ENST00000523990 CARD14Q9BXL6 1004 aa26.58■■□□□ 1.85
FBXO28-205ENST00000523990 GGNBP2Q9H3C7 697 aa26.57■■□□□ 1.84
FBXO28-205ENST00000523990 RGPD2P0DJD1 1756 aa26.57■■□□□ 1.84
FBXO28-205ENST00000523990 CCDC7Q96M83 1385 aa26.57■■□□□ 1.84
FBXO28-205ENST00000523990 PDE3BQ13370 1112 aa26.56■■□□□ 1.84
FBXO28-205ENST00000523990 SF3B2Q13435 895 aaKnown RBP26.56■■□□□ 1.84
FBXO28-205ENST00000523990 SRCAPQ6ZRS2 3230 aa26.56■■□□□ 1.84
FBXO28-205ENST00000523990 MAP3K19Q56UN5 1328 aa26.55■■□□□ 1.84
FBXO28-205ENST00000523990 FAM196AQ6ZSG2 479 aa26.55■■□□□ 1.84
FBXO28-205ENST00000523990 DEFB132Q7Z7B7 95 aa26.55■■□□□ 1.84
FBXO28-205ENST00000523990 POLR3GLQ9BT43 218 aa26.55■■□□□ 1.84
FBXO28-205ENST00000523990 IP6K1Q92551 441 aa26.54■■□□□ 1.84
FBXO28-205ENST00000523990 RTL1A6NKG5 1358 aa26.53■■□□□ 1.84
FBXO28-205ENST00000523990 FBLN1P23142 703 aa26.53■■□□□ 1.84
FBXO28-205ENST00000523990 ANKRD24Q8TF21 1146 aa26.53■■□□□ 1.84
FBXO28-205ENST00000523990 CDCA7Q9BWT1 371 aaPredicted RBP26.52■■□□□ 1.84
FBXO28-205ENST00000523990 OVOS2A0A0G2JMS6 1433 aa26.51■■□□□ 1.84
FBXO28-205ENST00000523990 DDB1Q16531 1140 aa26.51■■□□□ 1.83
FBXO28-205ENST00000523990 TNS2Q63HR2 1409 aa26.5■■□□□ 1.83
FBXO28-205ENST00000523990 MAP2P11137 1827 aaKnown RBP26.5■■□□□ 1.83
FBXO28-205ENST00000523990 HOXC9P31274 260 aa26.49■■□□□ 1.83
FBXO28-205ENST00000523990 C11orf95C9JLR9 678 aaPredicted RBP26.48■■□□□ 1.83
FBXO28-205ENST00000523990 BAG6P46379 1132 aa26.48■■□□□ 1.83
FBXO28-205ENST00000523990 RRS1Q15050 365 aaKnown RBP26.48■■□□□ 1.83
FBXO28-205ENST00000523990 NLRP2Q9NX02 1062 aa26.48■■□□□ 1.83
FBXO28-205ENST00000523990 TRIM37O94972 964 aa26.47■■□□□ 1.83
FBXO28-205ENST00000523990 AMPHP49418 695 aa26.47■■□□□ 1.83
FBXO28-205ENST00000523990 CGNL1Q0VF96 1302 aa26.47■■□□□ 1.83
FBXO28-205ENST00000523990 RREB1Q92766 1687 aa26.47■■□□□ 1.83
FBXO28-205ENST00000523990 RGPD3A6NKT7 1758 aaPredicted RBP26.45■■□□□ 1.82
FBXO28-205ENST00000523990 RGPD4Q7Z3J3 1758 aa26.45■■□□□ 1.82
FBXO28-205ENST00000523990 KIF24Q5T7B8 1368 aa26.44■■□□□ 1.82
FBXO28-205ENST00000523990 BCL9O00512 1426 aa26.43■■□□□ 1.82
FBXO28-205ENST00000523990 LTV1Q96GA3 475 aaPredicted RBP26.43■■□□□ 1.82
FBXO28-205ENST00000523990 SHANK3Q9BYB0 1731 aa26.43■■□□□ 1.82
FBXO28-205ENST00000523990 FLT4P35916 1363 aa26.42■■□□□ 1.82
FBXO28-205ENST00000523990 EN1Q05925 392 aaPredicted RBP26.41■■□□□ 1.82
FBXO28-205ENST00000523990 MARCH10Q8NA82 808 aaPredicted RBP26.41■■□□□ 1.82
FBXO28-205ENST00000523990 PANK3Q9H999 370 aa26.41■■□□□ 1.82
FBXO28-205ENST00000523990 NUP188Q5SRE5 1749 aa26.41■■□□□ 1.82
FBXO28-205ENST00000523990 IL2RBP14784 551 aa26.4■■□□□ 1.82
FBXO28-205ENST00000523990 NHSQ6T4R5 1651 aa26.4■■□□□ 1.82
FBXO28-205ENST00000523990 KIF7Q2M1P5 1343 aa26.4■■□□□ 1.82
FBXO28-205ENST00000523990 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
FBXO28-205ENST00000523990 INSRP06213 1382 aa26.39■■□□□ 1.82
FBXO28-205ENST00000523990 EXOC5O00471 708 aa26.39■■□□□ 1.81
FBXO28-205ENST00000523990 EMILIN1Q9Y6C2 1016 aa26.37■■□□□ 1.81
FBXO28-205ENST00000523990 PARD3Q8TEW0 1356 aa26.37■■□□□ 1.81
FBXO28-205ENST00000523990 APBA3O96018 575 aa26.36■■□□□ 1.81
FBXO28-205ENST00000523990 HSP90AB2PQ58FF8 381 aa26.36■■□□□ 1.81
FBXO28-205ENST00000523990 NSD2O96028 1365 aa26.36■■□□□ 1.81
FBXO28-205ENST00000523990 CAMKK2Q96RR4 588 aa26.35■■□□□ 1.81
FBXO28-205ENST00000523990 MEGF6O75095 1541 aa26.35■■□□□ 1.81
FBXO28-205ENST00000523990 EZH2Q15910 746 aaKnown RBP26.34■■□□□ 1.81
FBXO28-205ENST00000523990 NBPF6Q5VWK0 638 aa26.31■■□□□ 1.8
FBXO28-205ENST00000523990 NBPF4Q96M43 638 aa26.31■■□□□ 1.8
FBXO28-205ENST00000523990 BTAF1O14981 1849 aa26.3■■□□□ 1.8
FBXO28-205ENST00000523990 DOT1LQ8TEK3 1739 aa26.3■■□□□ 1.8
FBXO28-205ENST00000523990 BCL11BQ9C0K0 894 aaPredicted RBP26.3■■□□□ 1.8
FBXO28-205ENST00000523990 KAT6BQ8WYB5 2073 aa26.29■■□□□ 1.8
FBXO28-205ENST00000523990 PTF1AQ7RTS3 328 aa26.29■■□□□ 1.8
FBXO28-205ENST00000523990 NCAPD2Q15021 1401 aa26.28■■□□□ 1.8
FBXO28-205ENST00000523990 PKD1L3Q7Z443 1732 aa26.28■■□□□ 1.8
FBXO28-205ENST00000523990 POLKQ9UBT6 870 aa26.28■■□□□ 1.8
FBXO28-205ENST00000523990 USHBP1Q8N6Y0 703 aa26.27■■□□□ 1.8
FBXO28-205ENST00000523990 WASHC2AQ641Q2 1341 aa26.27■■□□□ 1.8
FBXO28-205ENST00000523990 PPM1GO15355 546 aaPredicted RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms