RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 FIGNL2A6NMB9 653 aa7□□□□□ -1.29
EFCAB13-212ENST00000523842 PPP1R26Q5T8A7 1209 aaPredicted RBP7□□□□□ -1.29
EFCAB13-212ENST00000523842 TRMT44Q8IYL2 757 aaKnown RBP7□□□□□ -1.29
EFCAB13-212ENST00000523842 AGBL1Q96MI9 1066 aa7□□□□□ -1.29
EFCAB13-212ENST00000523842 ARHGAP9Q9BRR9 750 aa7□□□□□ -1.29
EFCAB13-212ENST00000523842 FKBPLQ9UIM3 349 aa7□□□□□ -1.29
EFCAB13-212ENST00000523842 SH3D19Q5HYK7 790 aa6.99□□□□□ -1.29
EFCAB13-212ENST00000523842 CCDC116Q8IYX3 515 aa6.99□□□□□ -1.29
EFCAB13-212ENST00000523842 MAP4K5Q9Y4K4 846 aa6.99□□□□□ -1.29
EFCAB13-212ENST00000523842 SOS2Q07890 1332 aaPredicted RBP6.99□□□□□ -1.29
EFCAB13-212ENST00000523842 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
EFCAB13-212ENST00000523842 RAB15P59190 212 aa6.98□□□□□ -1.29
EFCAB13-212ENST00000523842 ZSCAN1Q8NBB4 408 aa6.98□□□□□ -1.29
EFCAB13-212ENST00000523842 PDXDC2PQ6P474 469 aa6.97□□□□□ -1.29
EFCAB13-212ENST00000523842 NPAS3Q8IXF0 933 aa6.97□□□□□ -1.29
EFCAB13-212ENST00000523842 GPR161Q8N6U8 529 aaKnown RBP6.97□□□□□ -1.29
EFCAB13-212ENST00000523842 KCTD15Q96SI1 283 aaPredicted RBP6.97□□□□□ -1.29
EFCAB13-212ENST00000523842 TMPRSS4Q9NRS4 437 aa6.97□□□□□ -1.29
EFCAB13-212ENST00000523842 UPP2O95045 317 aa6.96□□□□□ -1.3
EFCAB13-212ENST00000523842 PPP2R2DQ66LE6 453 aa6.96□□□□□ -1.3
EFCAB13-212ENST00000523842 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
EFCAB13-212ENST00000523842 RELBQ01201 579 aa6.95□□□□□ -1.3
EFCAB13-212ENST00000523842 INTS6LQ5JSJ4 861 aaKnown RBP6.95□□□□□ -1.3
EFCAB13-212ENST00000523842 ZBTB33Q86T24 672 aa6.95□□□□□ -1.3
EFCAB13-212ENST00000523842 ADAM32Q8TC27 787 aa6.95□□□□□ -1.3
EFCAB13-212ENST00000523842 TTLL8A6PVC2 850 aa6.94□□□□□ -1.3
EFCAB13-212ENST00000523842 USP17L8P0C7I0 530 aa6.94□□□□□ -1.3
EFCAB13-212ENST00000523842 CTSOP43234 321 aaPredicted RBP6.94□□□□□ -1.3
EFCAB13-212ENST00000523842 KRT76Q01546 638 aa6.94□□□□□ -1.3
EFCAB13-212ENST00000523842 SLC10A4Q96EP9 437 aa6.94□□□□□ -1.3
EFCAB13-212ENST00000523842 TSEN34Q9BSV6 310 aaKnown RBP6.94□□□□□ -1.3
EFCAB13-212ENST00000523842 ZNF395Q9H8N7 513 aaPredicted RBP6.94□□□□□ -1.3
EFCAB13-212ENST00000523842 VSIG8P0DPA2 414 aa6.93□□□□□ -1.3
EFCAB13-212ENST00000523842 RFC5P40937 340 aa6.93□□□□□ -1.3
EFCAB13-212ENST00000523842 PTSQ03393 145 aa6.93□□□□□ -1.3
EFCAB13-212ENST00000523842 Q6ZVU0 165 aa6.93□□□□□ -1.3
EFCAB13-212ENST00000523842 GPKOWQ92917 476 aaPredicted RBP eCLIP6.93□□□□□ -1.3
EFCAB13-212ENST00000523842 DDRGK1Q96HY6 314 aa6.93□□□□□ -1.3
EFCAB13-212ENST00000523842 INSM2Q96T92 566 aaPredicted RBP6.93□□□□□ -1.3
EFCAB13-212ENST00000523842 ADD1P35611 737 aaKnown RBP6.92□□□□□ -1.3
EFCAB13-212ENST00000523842 TRIM34Q9BYJ4 488 aa6.92□□□□□ -1.3
EFCAB13-212ENST00000523842 ZNF784Q8NCA9 323 aaPredicted RBP6.91□□□□□ -1.3
EFCAB13-212ENST00000523842 IL27Q8NEV9 243 aa6.91□□□□□ -1.3
EFCAB13-212ENST00000523842 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
EFCAB13-212ENST00000523842 SPINT1O43278 529 aa6.9□□□□□ -1.3
EFCAB13-212ENST00000523842 PTK2Q05397 1052 aa6.9□□□□□ -1.3
EFCAB13-212ENST00000523842 KDF1Q8NAX2 398 aaPredicted RBP6.9□□□□□ -1.3
EFCAB13-212ENST00000523842 BCANQ96GW7 911 aa6.9□□□□□ -1.3
EFCAB13-212ENST00000523842 ERVH48-1M5A8F1 160 aa6.89□□□□□ -1.31
EFCAB13-212ENST00000523842 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.89□□□□□ -1.31
EFCAB13-212ENST00000523842 RNFT1Q5M7Z0 435 aa6.89□□□□□ -1.31
EFCAB13-212ENST00000523842 CCDC155Q8N6L0 562 aa6.89□□□□□ -1.31
EFCAB13-212ENST00000523842 CNTNAP3BQ96NU0 1288 aa6.89□□□□□ -1.31
EFCAB13-212ENST00000523842 CNTNAP3Q9BZ76 1288 aa6.89□□□□□ -1.31
EFCAB13-212ENST00000523842 LILRA1O75019 489 aa6.88□□□□□ -1.31
EFCAB13-212ENST00000523842 POLMQ9NP87 494 aaPredicted RBP6.88□□□□□ -1.31
EFCAB13-212ENST00000523842 DZIP3Q86Y13 1208 aaKnown RBP6.87□□□□□ -1.31
EFCAB13-212ENST00000523842 VWA5B2Q8N398 1253 aa6.87□□□□□ -1.31
EFCAB13-212ENST00000523842 CYLDQ9NQC7 956 aa6.87□□□□□ -1.31
EFCAB13-212ENST00000523842 ZC3H4Q9UPT8 1303 aaKnown RBP6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 SLC35F4A4IF30 521 aa6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 NEUROD2Q15784 382 aa6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 FOXD4L5Q5VV16 416 aaPredicted RBP6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 RNF217Q8TC41 542 aa6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 WHAMMQ8TF30 809 aa6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 COL25A1Q9BXS0 654 aaPredicted RBP6.86□□□□□ -1.31
EFCAB13-212ENST00000523842 SENP3-EIF4A1A0A087X0R7 540 aa6.85□□□□□ -1.31
EFCAB13-212ENST00000523842 GIGYF1O75420 1035 aaPredicted RBP6.85□□□□□ -1.31
EFCAB13-212ENST00000523842 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
EFCAB13-212ENST00000523842 GJD4Q96KN9 370 aaPredicted RBP6.85□□□□□ -1.31
EFCAB13-212ENST00000523842 CUEDC1Q9NWM3 386 aaPredicted RBP6.85□□□□□ -1.31
EFCAB13-212ENST00000523842 GPSM3Q9Y4H4 160 aa6.85□□□□□ -1.31
EFCAB13-212ENST00000523842 CDC14CA4D256 554 aa6.84□□□□□ -1.31
EFCAB13-212ENST00000523842 FBXO45P0C2W1 286 aa6.84□□□□□ -1.31
EFCAB13-212ENST00000523842 RHOQP17081 205 aa6.84□□□□□ -1.31
EFCAB13-212ENST00000523842 CDV3Q9UKY7 258 aaKnown RBP6.84□□□□□ -1.31
EFCAB13-212ENST00000523842 ESPNB1AK53 854 aa6.83□□□□□ -1.32
EFCAB13-212ENST00000523842 ADH1AP07327 375 aa6.83□□□□□ -1.32
EFCAB13-212ENST00000523842 ITGA6P23229 1130 aa6.83□□□□□ -1.32
EFCAB13-212ENST00000523842 PTGIRP43119 386 aa6.83□□□□□ -1.32
EFCAB13-212ENST00000523842 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
EFCAB13-212ENST00000523842 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
EFCAB13-212ENST00000523842 GSK3AP49840 483 aa6.82□□□□□ -1.32
EFCAB13-212ENST00000523842 NBPF20Q3BBV1 942 aa6.82□□□□□ -1.32
EFCAB13-212ENST00000523842 PRICKLE2Q7Z3G6 844 aa6.82□□□□□ -1.32
EFCAB13-212ENST00000523842 GPR37L1O60883 481 aa6.81□□□□□ -1.32
EFCAB13-212ENST00000523842 BRPF1P55201 1214 aaPredicted RBP6.81□□□□□ -1.32
EFCAB13-212ENST00000523842 ZBBXA8MT70 800 aa6.8□□□□□ -1.32
EFCAB13-212ENST00000523842 SCTRP47872 440 aa6.8□□□□□ -1.32
EFCAB13-212ENST00000523842 NANOS1Q8WY41 292 aaKnown RBP6.8□□□□□ -1.32
EFCAB13-212ENST00000523842 SLC24A1O60721 1099 aa6.79□□□□□ -1.32
EFCAB13-212ENST00000523842 ZNF385CQ66K41 422 aaPredicted RBP6.79□□□□□ -1.32
EFCAB13-212ENST00000523842 SNRKQ9NRH2 765 aa6.79□□□□□ -1.32
EFCAB13-212ENST00000523842 MEN1O00255 615 aa6.78□□□□□ -1.32
EFCAB13-212ENST00000523842 TMEM259Q4ZIN3 620 aa6.78□□□□□ -1.32
EFCAB13-212ENST00000523842 SV2AQ7L0J3 742 aa6.78□□□□□ -1.32
EFCAB13-212ENST00000523842 KCTD17Q8N5Z5 321 aa6.78□□□□□ -1.32
EFCAB13-212ENST00000523842 ADAMTS8Q9UP79 889 aa6.78□□□□□ -1.32
EFCAB13-212ENST00000523842 GPR25O00155 361 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms