RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 CD163L1Q9NR16 1453 aa23.79■■□□□ 1.4
SPIDR-221ENST00000523814 USP31Q70CQ4 1352 aa23.78■■□□□ 1.4
SPIDR-221ENST00000523814 PARD3Q8TEW0 1356 aa23.78■■□□□ 1.4
SPIDR-221ENST00000523814 SOX12O15370 315 aa23.78■■□□□ 1.4
SPIDR-221ENST00000523814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.78■■□□□ 1.42e-6■■■□□ 15.1
SPIDR-221ENST00000523814 PARP4Q9UKK3 1724 aaKnown RBP23.78■■□□□ 1.4
SPIDR-221ENST00000523814 NFAT5O94916 1531 aa23.76■■□□□ 1.39
SPIDR-221ENST00000523814 DDB1Q16531 1140 aa23.76■■□□□ 1.39
SPIDR-221ENST00000523814 HDGFL2Q7Z4V5 671 aaPredicted RBP23.76■■□□□ 1.39
SPIDR-221ENST00000523814 CDCA7Q9BWT1 371 aaPredicted RBP23.76■■□□□ 1.39
SPIDR-221ENST00000523814 CARD10Q9BWT7 1032 aa23.76■■□□□ 1.39
SPIDR-221ENST00000523814 R3HDM1Q15032 1099 aaKnown RBP23.75■■□□□ 1.39
SPIDR-221ENST00000523814 NME9Q86XW9 330 aa23.75■■□□□ 1.39
SPIDR-221ENST00000523814 TESK2Q96S53 571 aa23.75■■□□□ 1.39
SPIDR-221ENST00000523814 TERF2IPQ9NYB0 399 aa23.75■■□□□ 1.39
SPIDR-221ENST00000523814 MON2Q7Z3U7 1717 aa23.75■■□□□ 1.39
SPIDR-221ENST00000523814 ST20-MTHFSA0A0A6YYL1 179 aa23.73■■□□□ 1.39
SPIDR-221ENST00000523814 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
SPIDR-221ENST00000523814 CSB-PGBD3P0DP91 1061 aa23.72■■□□□ 1.39
SPIDR-221ENST00000523814 LRP5O75197 1615 aa23.71■■□□□ 1.39
SPIDR-221ENST00000523814 OVOS2A0A0G2JMS6 1433 aa23.71■■□□□ 1.39
SPIDR-221ENST00000523814 OVOS2A0A0J9YW53 1432 aa23.71■■□□□ 1.39
SPIDR-221ENST00000523814 OVOS2Q6IE36 1432 aa23.71■■□□□ 1.39
SPIDR-221ENST00000523814 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
SPIDR-221ENST00000523814 ABCC6O95255 1503 aa23.7■■□□□ 1.38
SPIDR-221ENST00000523814 A0A1W2PP64 1363 aa23.69■■□□□ 1.38
SPIDR-221ENST00000523814 MARCH10Q8NA82 808 aaPredicted RBP23.69■■□□□ 1.38
SPIDR-221ENST00000523814 PEAK1Q9H792 1746 aa23.69■■□□□ 1.38
SPIDR-221ENST00000523814 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
SPIDR-221ENST00000523814 USP54Q70EL1 1684 aa23.68■■□□□ 1.38
SPIDR-221ENST00000523814 CCDC7Q96M83 1385 aa23.67■■□□□ 1.38
SPIDR-221ENST00000523814 NINLQ9Y2I6 1382 aa23.67■■□□□ 1.38
SPIDR-221ENST00000523814 LRRC37A3O60309 1634 aa23.67■■□□□ 1.38
SPIDR-221ENST00000523814 BCL11BQ9C0K0 894 aaPredicted RBP23.67■■□□□ 1.38
SPIDR-221ENST00000523814 BCL9O00512 1426 aa23.67■■□□□ 1.38
SPIDR-221ENST00000523814 EXOC5O00471 708 aa23.66■■□□□ 1.38
SPIDR-221ENST00000523814 PLSCR1O15162 318 aa23.66■■□□□ 1.38
SPIDR-221ENST00000523814 NBPF14Q5TI25 921 aa23.66■■□□□ 1.38
SPIDR-221ENST00000523814 RREB1Q92766 1687 aa23.64■■□□□ 1.37
SPIDR-221ENST00000523814 ERBB3P21860 1342 aa23.63■■□□□ 1.37
SPIDR-221ENST00000523814 PTF1AQ7RTS3 328 aa23.63■■□□□ 1.37
SPIDR-221ENST00000523814 NLRP2Q9NX02 1062 aa23.62■■□□□ 1.37
SPIDR-221ENST00000523814 WNK3Q9BYP7 1800 aa23.61■■□□□ 1.37
SPIDR-221ENST00000523814 ANKRD24Q8TF21 1146 aa23.6■■□□□ 1.37
SPIDR-221ENST00000523814 SBF2Q86WG5 1849 aa23.6■■□□□ 1.37
SPIDR-221ENST00000523814 NUP188Q5SRE5 1749 aa23.59■■□□□ 1.37
SPIDR-221ENST00000523814 IP6K1Q92551 441 aa23.59■■□□□ 1.37
SPIDR-221ENST00000523814 TMF1P82094 1093 aa23.58■■□□□ 1.37
SPIDR-221ENST00000523814 USP47Q96K76 1375 aa23.57■■□□□ 1.36
SPIDR-221ENST00000523814 COG3Q96JB2 828 aa23.57■■□□□ 1.36
SPIDR-221ENST00000523814 TIMELESSQ9UNS1 1208 aa23.57■■□□□ 1.36
SPIDR-221ENST00000523814 LTN1O94822 1766 aa23.56■■□□□ 1.36
SPIDR-221ENST00000523814 IL2RBP14784 551 aa23.56■■□□□ 1.36
SPIDR-221ENST00000523814 PROM2Q8N271 834 aa23.56■■□□□ 1.36
SPIDR-221ENST00000523814 ANKRD36BQ8N2N9 1353 aa23.55■■□□□ 1.36
SPIDR-221ENST00000523814 TNS2Q63HR2 1409 aa23.55■■□□□ 1.36
SPIDR-221ENST00000523814 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
SPIDR-221ENST00000523814 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
SPIDR-221ENST00000523814 MAP3K19Q56UN5 1328 aa23.52■■□□□ 1.36
SPIDR-221ENST00000523814 FYB1O15117 783 aa23.51■■□□□ 1.35
SPIDR-221ENST00000523814 KCNQ2O43526 872 aa23.51■■□□□ 1.35
SPIDR-221ENST00000523814 CDCA8Q53HL2 280 aa23.51■■□□□ 1.35
SPIDR-221ENST00000523814 CLSPNQ9HAW4 1339 aa23.51■■□□□ 1.35
SPIDR-221ENST00000523814 FBLN1P23142 703 aa23.5■■□□□ 1.35
SPIDR-221ENST00000523814 HOXC9P31274 260 aa23.49■■□□□ 1.35
SPIDR-221ENST00000523814 TXNRD1Q16881 649 aa23.49■■□□□ 1.35
SPIDR-221ENST00000523814 AMPHP49418 695 aa23.48■■□□□ 1.35
SPIDR-221ENST00000523814 LTV1Q96GA3 475 aaPredicted RBP23.48■■□□□ 1.35
SPIDR-221ENST00000523814 SPON1Q9HCB6 807 aa23.48■■□□□ 1.35
SPIDR-221ENST00000523814 ANO8Q9HCE9 1232 aaPredicted RBP23.48■■□□□ 1.35
SPIDR-221ENST00000523814 ACSBG1Q96GR2 724 aa23.46■■□□□ 1.35
SPIDR-221ENST00000523814 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
SPIDR-221ENST00000523814 GGNBP2Q9H3C7 697 aa23.45■■□□□ 1.34
SPIDR-221ENST00000523814 NHSQ6T4R5 1651 aa23.42■■□□□ 1.34
SPIDR-221ENST00000523814 RRS1Q15050 365 aaKnown RBP23.42■■□□□ 1.34
SPIDR-221ENST00000523814 DDX54Q8TDD1 881 aaKnown RBP23.42■■□□□ 1.34
SPIDR-221ENST00000523814 CARD14Q9BXL6 1004 aa23.42■■□□□ 1.34
SPIDR-221ENST00000523814 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
SPIDR-221ENST00000523814 RTL1A6NKG5 1358 aa23.41■■□□□ 1.34
SPIDR-221ENST00000523814 STK32BQ9NY57 414 aa23.41■■□□□ 1.34
SPIDR-221ENST00000523814 SLC15A2Q16348 729 aa23.4■■□□□ 1.34
SPIDR-221ENST00000523814 PDGFDQ9GZP0 370 aaPredicted RBP23.4■■□□□ 1.34
SPIDR-221ENST00000523814 PPP1R1BQ9UD71 204 aaPredicted RBP23.38■■□□□ 1.33
SPIDR-221ENST00000523814 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
SPIDR-221ENST00000523814 ZCRB1Q8TBF4 217 aaKnown RBP23.37■■□□□ 1.33
SPIDR-221ENST00000523814 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
SPIDR-221ENST00000523814 CASZ1Q86V15 1759 aa23.36■■□□□ 1.33
SPIDR-221ENST00000523814 HSP90AB2PQ58FF8 381 aa23.35■■□□□ 1.33
SPIDR-221ENST00000523814 KIF24Q5T7B8 1368 aa23.35■■□□□ 1.33
SPIDR-221ENST00000523814 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
SPIDR-221ENST00000523814 INSRP06213 1382 aa23.34■■□□□ 1.33
SPIDR-221ENST00000523814 ZBTB7AO95365 584 aa23.33■■□□□ 1.33
SPIDR-221ENST00000523814 BTAF1O14981 1849 aa23.33■■□□□ 1.32
SPIDR-221ENST00000523814 PTGER2P43116 358 aa23.32■■□□□ 1.32
SPIDR-221ENST00000523814 PRIM1P49642 420 aaKnown RBP23.32■■□□□ 1.32
SPIDR-221ENST00000523814 LRRC4BQ9NT99 713 aa23.32■■□□□ 1.32
SPIDR-221ENST00000523814 MEGF6O75095 1541 aa23.32■■□□□ 1.32
SPIDR-221ENST00000523814 FLT4P35916 1363 aa23.31■■□□□ 1.32
SPIDR-221ENST00000523814 RGPD2P0DJD1 1756 aa23.31■■□□□ 1.32
SPIDR-221ENST00000523814 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms