RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 PURBQ96QR8 312 aaKnown RBP9.85□□□□□ -0.83
SKP1-211ENST00000523359 FSHRP23945 695 aa9.84□□□□□ -0.83
SKP1-211ENST00000523359 HMX1Q9NP08 348 aaPredicted RBP9.84□□□□□ -0.83
SKP1-211ENST00000523359 SCARF1Q14162 830 aa9.83□□□□□ -0.84
SKP1-211ENST00000523359 NR6A1Q15406 480 aa9.83□□□□□ -0.84
SKP1-211ENST00000523359 VASH1Q7L8A9 365 aaPredicted RBP9.83□□□□□ -0.84
SKP1-211ENST00000523359 COG6Q9Y2V7 657 aa9.83□□□□□ -0.84
SKP1-211ENST00000523359 A6NJR5 290 aa9.82□□□□□ -0.84
SKP1-211ENST00000523359 RAD21O60216 631 aa9.82□□□□□ -0.84
SKP1-211ENST00000523359 TRMT44Q8IYL2 757 aaKnown RBP9.82□□□□□ -0.84
SKP1-211ENST00000523359 GPKOWQ92917 476 aaPredicted RBP eCLIP9.82□□□□□ -0.84
SKP1-211ENST00000523359 NXF1Q9UBU9 619 aaKnown RBP9.82□□□□□ -0.84
SKP1-211ENST00000523359 SOCS7O14512 581 aa9.81□□□□□ -0.84
SKP1-211ENST00000523359 VEGFBP49765 207 aa9.81□□□□□ -0.84
SKP1-211ENST00000523359 ERFEQ4G0M1 354 aa9.81□□□□□ -0.84
SKP1-211ENST00000523359 C6orf118Q5T5N4 469 aa9.81□□□□□ -0.84
SKP1-211ENST00000523359 GJD4Q96KN9 370 aaPredicted RBP9.81□□□□□ -0.84
SKP1-211ENST00000523359 FKBPLQ9UIM3 349 aa9.81□□□□□ -0.84
SKP1-211ENST00000523359 MAP4K5Q9Y4K4 846 aa9.81□□□□□ -0.84
SKP1-211ENST00000523359 SOBPA7XYQ1 873 aa9.8□□□□□ -0.84
SKP1-211ENST00000523359 APBB1O00213 710 aa9.8□□□□□ -0.84
SKP1-211ENST00000523359 ARHGAP9Q9BRR9 750 aa9.8□□□□□ -0.84
SKP1-211ENST00000523359 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
SKP1-211ENST00000523359 PDXDC2PQ6P474 469 aa9.79□□□□□ -0.84
SKP1-211ENST00000523359 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
SKP1-211ENST00000523359 TBC1D2BQ9UPU7 963 aa9.79□□□□□ -0.84
SKP1-211ENST00000523359 WIPF1O43516 503 aa9.78□□□□□ -0.84
SKP1-211ENST00000523359 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
SKP1-211ENST00000523359 EPS8L1Q8TE68 723 aa9.78□□□□□ -0.84
SKP1-211ENST00000523359 SLC16A10Q8TF71 515 aa9.78□□□□□ -0.84
SKP1-211ENST00000523359 CCDC116Q8IYX3 515 aa9.77□□□□□ -0.85
SKP1-211ENST00000523359 PRM3Q9NNZ6 103 aa9.77□□□□□ -0.85
SKP1-211ENST00000523359 TRAK2O60296 914 aa9.76□□□□□ -0.85
SKP1-211ENST00000523359 ABL2P42684 1182 aa9.76□□□□□ -0.85
SKP1-211ENST00000523359 ZBTB33Q86T24 672 aa9.76□□□□□ -0.85
SKP1-211ENST00000523359 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
SKP1-211ENST00000523359 MEIOBQ8N635 442 aa9.76□□□□□ -0.85
SKP1-211ENST00000523359 NDUFB9Q9Y6M9 179 aa9.76□□□□□ -0.85
SKP1-211ENST00000523359 UPP2O95045 317 aa9.75□□□□□ -0.85
SKP1-211ENST00000523359 BMP2P12643 396 aa9.75□□□□□ -0.85
SKP1-211ENST00000523359 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
SKP1-211ENST00000523359 SLC10A4Q96EP9 437 aa9.75□□□□□ -0.85
SKP1-211ENST00000523359 OCSTAMPQ9BR26 566 aa9.74□□□□□ -0.85
SKP1-211ENST00000523359 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
SKP1-211ENST00000523359 ZC3H4Q9UPT8 1303 aaKnown RBP9.74□□□□□ -0.85
SKP1-211ENST00000523359 H3BM21 787 aa9.73□□□□□ -0.85
SKP1-211ENST00000523359 MAN1A2O60476 641 aa9.73□□□□□ -0.85
SKP1-211ENST00000523359 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
SKP1-211ENST00000523359 PTK2Q05397 1052 aa9.73□□□□□ -0.85
SKP1-211ENST00000523359 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
SKP1-211ENST00000523359 ARID3CA6NKF2 412 aa9.72□□□□□ -0.85
SKP1-211ENST00000523359 PPP1R26Q5T8A7 1209 aaPredicted RBP9.72□□□□□ -0.85
SKP1-211ENST00000523359 NPAS3Q8IXF0 933 aa9.72□□□□□ -0.85
SKP1-211ENST00000523359 IRF7Q92985 503 aa9.72□□□□□ -0.85
SKP1-211ENST00000523359 GPR37L1O60883 481 aa9.71□□□□□ -0.86
SKP1-211ENST00000523359 GMPRP36959 345 aa9.71□□□□□ -0.86
SKP1-211ENST00000523359 ADAM32Q8TC27 787 aa9.71□□□□□ -0.86
SKP1-211ENST00000523359 CBLBQ13191 982 aa9.7□□□□□ -0.86
SKP1-211ENST00000523359 IRF5Q13568 498 aa9.7□□□□□ -0.86
SKP1-211ENST00000523359 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
SKP1-211ENST00000523359 CDV3Q9UKY7 258 aaKnown RBP9.7□□□□□ -0.86
SKP1-211ENST00000523359 ZNF777Q9ULD5 760 aaPredicted RBP9.7□□□□□ -0.86
SKP1-211ENST00000523359 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
SKP1-211ENST00000523359 ERBB4Q15303 1308 aa9.7□□□□□ -0.86
SKP1-211ENST00000523359 WWC1Q8IX03 1113 aa9.69□□□□□ -0.86
SKP1-211ENST00000523359 TSEN34Q9BSV6 310 aaKnown RBP9.69□□□□□ -0.86
SKP1-211ENST00000523359 C1orf115Q9H7X2 142 aa9.69□□□□□ -0.86
SKP1-211ENST00000523359 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
SKP1-211ENST00000523359 SOS2Q07890 1332 aaPredicted RBP9.68□□□□□ -0.86
SKP1-211ENST00000523359 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
SKP1-211ENST00000523359 PNMA1Q8ND90 353 aa9.68□□□□□ -0.86
SKP1-211ENST00000523359 DNMT3LQ9UJW3 386 aa9.68□□□□□ -0.86
SKP1-211ENST00000523359 STK17AQ9UEE5 414 aa9.67□□□□□ -0.86
SKP1-211ENST00000523359 RAB15P59190 212 aa9.66□□□□□ -0.86
SKP1-211ENST00000523359 DHX9Q08211 1270 aaKnown RBP9.66□□□□□ -0.86
SKP1-211ENST00000523359 Q6ZVU0 165 aa9.66□□□□□ -0.86
SKP1-211ENST00000523359 POM121CA8CG34 1229 aa9.65□□□□□ -0.86
SKP1-211ENST00000523359 VAC14Q08AM6 782 aa9.64□□□□□ -0.87
SKP1-211ENST00000523359 NBPF20Q3BBV1 942 aa9.64□□□□□ -0.87
SKP1-211ENST00000523359 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
SKP1-211ENST00000523359 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
SKP1-211ENST00000523359 TTLL8A6PVC2 850 aa9.63□□□□□ -0.87
SKP1-211ENST00000523359 PPFIA3O75145 1194 aa9.63□□□□□ -0.87
SKP1-211ENST00000523359 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
SKP1-211ENST00000523359 TMPRSS4Q9NRS4 437 aa9.63□□□□□ -0.87
SKP1-211ENST00000523359 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
SKP1-211ENST00000523359 ARID3AQ99856 593 aa9.62□□□□□ -0.87
SKP1-211ENST00000523359 SPINT1O43278 529 aa9.61□□□□□ -0.87
SKP1-211ENST00000523359 RELBQ01201 579 aa9.61□□□□□ -0.87
SKP1-211ENST00000523359 VSIG8P0DPA2 414 aa9.6□□□□□ -0.87
SKP1-211ENST00000523359 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.6□□□□□ -0.87
SKP1-211ENST00000523359 ZNF784Q8NCA9 323 aaPredicted RBP9.6□□□□□ -0.87
SKP1-211ENST00000523359 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
SKP1-211ENST00000523359 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
SKP1-211ENST00000523359 CCDC82Q8N4S0 544 aa9.59□□□□□ -0.87
SKP1-211ENST00000523359 ZSCAN1Q8NBB4 408 aa9.59□□□□□ -0.87
SKP1-211ENST00000523359 ZBBXA8MT70 800 aa9.58□□□□□ -0.88
SKP1-211ENST00000523359 FBXO45P0C2W1 286 aa9.58□□□□□ -0.88
SKP1-211ENST00000523359 CTSOP43234 321 aaPredicted RBP9.58□□□□□ -0.88
SKP1-211ENST00000523359 PTSQ03393 145 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms