RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
CSMD1-211ENST00000523062 CNTLNQ9NXG0 1405 aa9.55□□□□□ -0.88
CSMD1-211ENST00000523062 ZC3H13Q5T200 1668 aaKnown RBP9.55□□□□□ -0.88
CSMD1-211ENST00000523062 REREQ9P2R6 1566 aa9.54□□□□□ -0.88
CSMD1-211ENST00000523062 POLR1AO95602 1720 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-211ENST00000523062 TSPOAP1O95153 1857 aa9.54□□□□□ -0.88
CSMD1-211ENST00000523062 APLP1P51693 650 aa9.54□□□□□ -0.88
CSMD1-211ENST00000523062 MAP3K7O43318 606 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 ANP32CO43423 234 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 SLC19A1P41440 591 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 PRSS12P56730 875 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 LCE2AQ5TA79 106 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-211ENST00000523062 GGT6Q6P531 493 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 KIF13AQ9H1H9 1805 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 NPATQ14207 1427 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 ARID4BQ4LE39 1312 aaPredicted RBP9.53□□□□□ -0.88
CSMD1-211ENST00000523062 CAMSAP1Q5T5Y3 1602 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 MADDQ8WXG6 1647 aa9.53□□□□□ -0.88
CSMD1-211ENST00000523062 AGLP35573 1532 aa9.52□□□□□ -0.88
CSMD1-211ENST00000523062 PRR20EP86478 221 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 PRR20CP86479 221 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 PRR20DP86480 221 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 PRR20BP86481 221 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 PRR20AP86496 221 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 NBR1Q14596 966 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 ARHGAP31Q2M1Z3 1444 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 TATDN2Q93075 761 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 KIF7Q2M1P5 1343 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 WASHC2CQ9Y4E1 1318 aa9.52□□□□□ -0.89
CSMD1-211ENST00000523062 ARHGEF40Q8TER5 1519 aa9.51□□□□□ -0.89
CSMD1-211ENST00000523062 NBPF26B4DH59 902 aa9.51□□□□□ -0.89
CSMD1-211ENST00000523062 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
CSMD1-211ENST00000523062 MYOM2P54296 1465 aa9.51□□□□□ -0.89
CSMD1-211ENST00000523062 ADGRB3O60242 1522 aa9.51□□□□□ -0.89
CSMD1-211ENST00000523062 UGGT1Q9NYU2 1555 aa9.5□□□□□ -0.89
CSMD1-211ENST00000523062 NOS1P29475 1434 aa9.5□□□□□ -0.89
CSMD1-211ENST00000523062 KIF1BO60333 1816 aa9.5□□□□□ -0.89
CSMD1-211ENST00000523062 CCER2I3L3R5 266 aa9.5□□□□□ -0.89
CSMD1-211ENST00000523062 YTHDC1Q96MU7 727 aaKnown RBP9.5□□□□□ -0.89
CSMD1-211ENST00000523062 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-211ENST00000523062 RNF40O75150 1001 aa9.49□□□□□ -0.89
CSMD1-211ENST00000523062 ZNF598Q86UK7 904 aaKnown RBP9.49□□□□□ -0.89
CSMD1-211ENST00000523062 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
CSMD1-211ENST00000523062 COPS2P61201 443 aa9.48□□□□□ -0.89
CSMD1-211ENST00000523062 SPRYD7Q5W111 196 aa9.48□□□□□ -0.89
CSMD1-211ENST00000523062 STK17AQ9UEE5 414 aa9.48□□□□□ -0.89
CSMD1-211ENST00000523062 MROH2AA6NES4 1674 aa9.48□□□□□ -0.89
CSMD1-211ENST00000523062 KIAA1210Q9ULL0 1709 aa9.48□□□□□ -0.89
CSMD1-211ENST00000523062 ST20-MTHFSA0A0A6YYL1 179 aa9.47□□□□□ -0.89
CSMD1-211ENST00000523062 ZPR1O75312 459 aa9.47□□□□□ -0.89
CSMD1-211ENST00000523062 EMID1Q96A84 441 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-211ENST00000523062 IFT172Q9UG01 1749 aa9.47□□□□□ -0.89
CSMD1-211ENST00000523062 NRXN1Q9ULB1 1477 aa9.47□□□□□ -0.89
CSMD1-211ENST00000523062 SYNMO15061 1565 aa9.46□□□□□ -0.89
CSMD1-211ENST00000523062 PIK3C2BO00750 1634 aa9.46□□□□□ -0.89
CSMD1-211ENST00000523062 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.9
CSMD1-211ENST00000523062 COL17A1Q9UMD9 1497 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-211ENST00000523062 SIGLEC1Q9BZZ2 1709 aa9.45□□□□□ -0.9
CSMD1-211ENST00000523062 FAM187AA6NFU0 413 aa9.45□□□□□ -0.9
CSMD1-211ENST00000523062 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
CSMD1-211ENST00000523062 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
CSMD1-211ENST00000523062 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
CSMD1-211ENST00000523062 SCAF11Q99590 1463 aaKnown RBP9.45□□□□□ -0.9
CSMD1-211ENST00000523062 IQGAP1P46940 1657 aa9.45□□□□□ -0.9
CSMD1-211ENST00000523062 PDIA6Q15084 440 aa9.44□□□□□ -0.9
CSMD1-211ENST00000523062 EIF3AQ14152 1382 aaKnown RBP9.44□□□□□ -0.9
CSMD1-211ENST00000523062 PREX1Q8TCU6 1659 aa9.44□□□□□ -0.9
CSMD1-211ENST00000523062 ERVK-7P63135 1459 aa9.43□□□□□ -0.9
CSMD1-211ENST00000523062 NUDT18Q6ZVK8 323 aa9.43□□□□□ -0.9
CSMD1-211ENST00000523062 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
CSMD1-211ENST00000523062 SLC52A1Q9NWF4 448 aa9.43□□□□□ -0.9
CSMD1-211ENST00000523062 PPLO60437 1756 aa9.42□□□□□ -0.9
CSMD1-211ENST00000523062 ADGRF5Q8IZF2 1346 aa9.42□□□□□ -0.9
CSMD1-211ENST00000523062 WFS1O76024 890 aa9.42□□□□□ -0.9
CSMD1-211ENST00000523062 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
CSMD1-211ENST00000523062 PRR14Q9BWN1 585 aa9.42□□□□□ -0.9
CSMD1-211ENST00000523062 SETBP1Q9Y6X0 1596 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 TMF1P82094 1093 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 TESK2Q96S53 571 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 NEXMIFQ5QGS0 1516 aa9.41□□□□□ -0.9
CSMD1-211ENST00000523062 CFAP65Q6ZU64 1925 aaKnown RBP9.41□□□□□ -0.9
CSMD1-211ENST00000523062 CLTCQ00610 1675 aaKnown RBP9.4□□□□□ -0.9
CSMD1-211ENST00000523062 INSM1Q01101 510 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-211ENST00000523062 ZNF697Q5TEC3 545 aa9.4□□□□□ -0.9
CSMD1-211ENST00000523062 PRKRIP1Q9H875 184 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-211ENST00000523062 SPATA31D1Q6ZQQ2 1576 aa9.4□□□□□ -0.9
CSMD1-211ENST00000523062 DISP3Q9P2K9 1392 aa9.39□□□□□ -0.91
CSMD1-211ENST00000523062 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-211ENST00000523062 GDF9O60383 454 aa9.39□□□□□ -0.91
CSMD1-211ENST00000523062 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
CSMD1-211ENST00000523062 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
CSMD1-211ENST00000523062 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
CSMD1-211ENST00000523062 RBM27Q9P2N5 1060 aaKnown RBP9.39□□□□□ -0.91
CSMD1-211ENST00000523062 ZFYVE9O95405 1425 aa9.39□□□□□ -0.91
CSMD1-211ENST00000523062 TMEM131LA2VDJ0 1609 aa9.38□□□□□ -0.91
CSMD1-211ENST00000523062 ST8SIA5O15466 376 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms