RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 PURBQ96QR8 312 aaKnown RBP9.43□□□□□ -0.9
CLK4-213ENST00000523013 TERTO14746 1132 aaKnown RBP9.42□□□□□ -0.9
CLK4-213ENST00000523013 ZBTB33Q86T24 672 aa9.42□□□□□ -0.9
CLK4-213ENST00000523013 CCDC116Q8IYX3 515 aa9.42□□□□□ -0.9
CLK4-213ENST00000523013 ADAM32Q8TC27 787 aa9.42□□□□□ -0.9
CLK4-213ENST00000523013 SCARF1Q14162 830 aa9.41□□□□□ -0.9
CLK4-213ENST00000523013 MEIOBQ8N635 442 aa9.41□□□□□ -0.9
CLK4-213ENST00000523013 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
CLK4-213ENST00000523013 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
CLK4-213ENST00000523013 GJD4Q96KN9 370 aaPredicted RBP9.4□□□□□ -0.9
CLK4-213ENST00000523013 KCTD15Q96SI1 283 aaPredicted RBP9.4□□□□□ -0.9
CLK4-213ENST00000523013 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.9
CLK4-213ENST00000523013 PPP1R26Q5T8A7 1209 aaPredicted RBP9.39□□□□□ -0.91
CLK4-213ENST00000523013 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
CLK4-213ENST00000523013 INTS6LQ5JSJ4 861 aaKnown RBP9.38□□□□□ -0.91
CLK4-213ENST00000523013 C6orf118Q5T5N4 469 aa9.38□□□□□ -0.91
CLK4-213ENST00000523013 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
CLK4-213ENST00000523013 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
CLK4-213ENST00000523013 NXF1Q9UBU9 619 aaKnown RBP9.37□□□□□ -0.91
CLK4-213ENST00000523013 CBLBQ13191 982 aa9.35□□□□□ -0.91
CLK4-213ENST00000523013 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
CLK4-213ENST00000523013 PGPEP1Q9NXJ5 209 aa9.35□□□□□ -0.91
CLK4-213ENST00000523013 BMP2P12643 396 aa9.34□□□□□ -0.91
CLK4-213ENST00000523013 Q6ZVU0 165 aa9.34□□□□□ -0.91
CLK4-213ENST00000523013 WIPF1O43516 503 aa9.33□□□□□ -0.92
CLK4-213ENST00000523013 UPP2O95045 317 aa9.33□□□□□ -0.92
CLK4-213ENST00000523013 DHX9Q08211 1270 aaKnown RBP9.33□□□□□ -0.92
CLK4-213ENST00000523013 NBPF20Q3BBV1 942 aa9.33□□□□□ -0.92
CLK4-213ENST00000523013 NPAS3Q8IXF0 933 aa9.33□□□□□ -0.92
CLK4-213ENST00000523013 MTMR14Q8NCE2 650 aa9.33□□□□□ -0.92
CLK4-213ENST00000523013 TSEN34Q9BSV6 310 aaKnown RBP9.33□□□□□ -0.92
CLK4-213ENST00000523013 ESPNB1AK53 854 aa9.32□□□□□ -0.92
CLK4-213ENST00000523013 GPR37L1O60883 481 aa9.32□□□□□ -0.92
CLK4-213ENST00000523013 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
CLK4-213ENST00000523013 VEGFBP49765 207 aa9.32□□□□□ -0.92
CLK4-213ENST00000523013 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
CLK4-213ENST00000523013 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
CLK4-213ENST00000523013 ZBBXA8MT70 800 aa9.31□□□□□ -0.92
CLK4-213ENST00000523013 H3BM21 787 aa9.31□□□□□ -0.92
CLK4-213ENST00000523013 SOCS7O14512 581 aa9.31□□□□□ -0.92
CLK4-213ENST00000523013 PRKCSHP14314 528 aaPredicted RBP9.31□□□□□ -0.92
CLK4-213ENST00000523013 SNRKQ9NRH2 765 aa9.31□□□□□ -0.92
CLK4-213ENST00000523013 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
CLK4-213ENST00000523013 MAN1A2O60476 641 aa9.3□□□□□ -0.92
CLK4-213ENST00000523013 SLC16A10Q8TF71 515 aa9.3□□□□□ -0.92
CLK4-213ENST00000523013 DNMT3LQ9UJW3 386 aa9.3□□□□□ -0.92
CLK4-213ENST00000523013 RAB15P59190 212 aa9.29□□□□□ -0.92
CLK4-213ENST00000523013 ERVH48-1M5A8F1 160 aa9.28□□□□□ -0.92
CLK4-213ENST00000523013 SPINT1O43278 529 aa9.28□□□□□ -0.92
CLK4-213ENST00000523013 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
CLK4-213ENST00000523013 AGBL1Q96MI9 1066 aa9.28□□□□□ -0.92
CLK4-213ENST00000523013 ERBB4Q15303 1308 aa9.28□□□□□ -0.92
CLK4-213ENST00000523013 LILRA1O75019 489 aa9.27□□□□□ -0.93
CLK4-213ENST00000523013 IRF7Q92985 503 aa9.27□□□□□ -0.93
CLK4-213ENST00000523013 SEPT12Q8IYM1 358 aa9.26□□□□□ -0.93
CLK4-213ENST00000523013 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
CLK4-213ENST00000523013 NDUFB9Q9Y6M9 179 aa9.26□□□□□ -0.93
CLK4-213ENST00000523013 TTLL8A6PVC2 850 aa9.25□□□□□ -0.93
CLK4-213ENST00000523013 ADD1P35611 737 aaKnown RBP9.25□□□□□ -0.93
CLK4-213ENST00000523013 GMPRP36959 345 aa9.25□□□□□ -0.93
CLK4-213ENST00000523013 NR1H3Q13133 447 aa9.25□□□□□ -0.93
CLK4-213ENST00000523013 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
CLK4-213ENST00000523013 RELBQ01201 579 aa9.24□□□□□ -0.93
CLK4-213ENST00000523013 KDF1Q8NAX2 398 aaPredicted RBP9.24□□□□□ -0.93
CLK4-213ENST00000523013 ADH1AP07327 375 aa9.23□□□□□ -0.93
CLK4-213ENST00000523013 FIGNL2A6NMB9 653 aa9.22□□□□□ -0.93
CLK4-213ENST00000523013 PPFIA3O75145 1194 aa9.22□□□□□ -0.93
CLK4-213ENST00000523013 VSIG8P0DPA2 414 aa9.22□□□□□ -0.93
CLK4-213ENST00000523013 CTSOP43234 321 aaPredicted RBP9.22□□□□□ -0.93
CLK4-213ENST00000523013 INSM1Q01101 510 aaPredicted RBP9.22□□□□□ -0.93
CLK4-213ENST00000523013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.22□□□□□ -0.93
CLK4-213ENST00000523013 INSM2Q96T92 566 aaPredicted RBP9.22□□□□□ -0.93
CLK4-213ENST00000523013 ZNF395Q9H8N7 513 aaPredicted RBP9.22□□□□□ -0.93
CLK4-213ENST00000523013 APBB1O00213 710 aa9.21□□□□□ -0.94
CLK4-213ENST00000523013 CYLDQ9NQC7 956 aa9.21□□□□□ -0.94
CLK4-213ENST00000523013 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
CLK4-213ENST00000523013 PTGIRP43119 386 aa9.19□□□□□ -0.94
CLK4-213ENST00000523013 PTSQ03393 145 aa9.19□□□□□ -0.94
CLK4-213ENST00000523013 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
CLK4-213ENST00000523013 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
CLK4-213ENST00000523013 RNF217Q8TC41 542 aa9.18□□□□□ -0.94
CLK4-213ENST00000523013 FOXD4L5Q5VV16 416 aaPredicted RBP9.17□□□□□ -0.94
CLK4-213ENST00000523013 CCDC125Q86Z20 511 aa9.17□□□□□ -0.94
CLK4-213ENST00000523013 POLMQ9NP87 494 aaPredicted RBP9.17□□□□□ -0.94
CLK4-213ENST00000523013 STK17AQ9UEE5 414 aa9.17□□□□□ -0.94
CLK4-213ENST00000523013 ZNF330Q9Y3S2 320 aaPredicted RBP9.17□□□□□ -0.94
CLK4-213ENST00000523013 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
CLK4-213ENST00000523013 IRF5Q13568 498 aa9.16□□□□□ -0.94
CLK4-213ENST00000523013 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
CLK4-213ENST00000523013 SLC35F4A4IF30 521 aa9.15□□□□□ -0.94
CLK4-213ENST00000523013 SCTRP47872 440 aa9.14□□□□□ -0.95
CLK4-213ENST00000523013 CC2D2BQ6DHV5 1058 aa9.14□□□□□ -0.95
CLK4-213ENST00000523013 CCDC155Q8N6L0 562 aa9.14□□□□□ -0.95
CLK4-213ENST00000523013 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
CLK4-213ENST00000523013 ATP5J2-PTCD1G3V325 749 aa9.13□□□□□ -0.95
CLK4-213ENST00000523013 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
CLK4-213ENST00000523013 SENP3-EIF4A1A0A087X0R7 540 aa9.12□□□□□ -0.95
CLK4-213ENST00000523013 CEP126Q9P2H0 1117 aa9.12□□□□□ -0.95
CLK4-213ENST00000523013 PCDHB11Q9Y5F2 797 aa9.12□□□□□ -0.95
CLK4-213ENST00000523013 RNF144AP50876 292 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms