RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	SEPT12	Q8IYM1	358 aa		11.59	□□□□□ -0.55
CTNNA1-231	ENST00000521941	GGNBP2	Q9H3C7	697 aa		11.59	□□□□□ -0.55
CTNNA1-231	ENST00000521941	AATK	Q6ZMQ8	1374 aa		11.58	□□□□□ -0.56
CTNNA1-231	ENST00000521941	ARHGEF25	Q86VW2	580 aa		11.58	□□□□□ -0.56
CTNNA1-231	ENST00000521941	THSD7A	Q9UPZ6	1657 aa		11.58	□□□□□ -0.56
CTNNA1-231	ENST00000521941	SPATA31A1	Q5TZJ5	1347 aa		11.58	□□□□□ -0.56
CTNNA1-231	ENST00000521941	C11orf95	C9JLR9	678 aa	Predicted RBP	11.57	□□□□□ -0.56
CTNNA1-231	ENST00000521941	CSB-PGBD3	P0DP91	1061 aa		11.57	□□□□□ -0.56
CTNNA1-231	ENST00000521941	AXIN2	Q9Y2T1	843 aa		11.57	□□□□□ -0.56
CTNNA1-231	ENST00000521941	WNK3	Q9BYP7	1800 aa		11.57	□□□□□ -0.56
CTNNA1-231	ENST00000521941	FBLN1	P23142	703 aa		11.56	□□□□□ -0.56
CTNNA1-231	ENST00000521941	TOM1L2	Q6ZVM7	507 aa		11.56	□□□□□ -0.56
CTNNA1-231	ENST00000521941	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
CTNNA1-231	ENST00000521941	CARD14	Q9BXL6	1004 aa		11.56	□□□□□ -0.56
CTNNA1-231	ENST00000521941	ABCC6	O95255	1503 aa		11.55	□□□□□ -0.56
CTNNA1-231	ENST00000521941	CRB1	P82279	1406 aa		11.55	□□□□□ -0.56
CTNNA1-231	ENST00000521941	FYB1	O15117	783 aa		11.55	□□□□□ -0.56
CTNNA1-231	ENST00000521941	KIF7	Q2M1P5	1343 aa		11.55	□□□□□ -0.56
CTNNA1-231	ENST00000521941	ANKRD26	Q9UPS8	1709 aa		11.55	□□□□□ -0.56
CTNNA1-231	ENST00000521941	RRS1	Q15050	365 aa	Known RBP	11.54	□□□□□ -0.56
CTNNA1-231	ENST00000521941	FAM182B	Q5T319	152 aa		11.54	□□□□□ -0.56
CTNNA1-231	ENST00000521941	KRT27	Q7Z3Y8	459 aa		11.54	□□□□□ -0.56
CTNNA1-231	ENST00000521941	TCP11L2	Q8N4U5	519 aa		11.54	□□□□□ -0.56
CTNNA1-231	ENST00000521941	LTV1	Q96GA3	475 aa	Predicted RBP	11.54	□□□□□ -0.56
CTNNA1-231	ENST00000521941	WDR17	Q8IZU2	1322 aa		11.54	□□□□□ -0.56
CTNNA1-231	ENST00000521941	PANK3	Q9H999	370 aa		11.53	□□□□□ -0.56
CTNNA1-231	ENST00000521941	CGNL1	Q0VF96	1302 aa		11.53	□□□□□ -0.56
CTNNA1-231	ENST00000521941	MAP3K19	Q56UN5	1328 aa		11.53	□□□□□ -0.56
CTNNA1-231	ENST00000521941	LRRC37A3	O60309	1634 aa		11.53	□□□□□ -0.56
CTNNA1-231	ENST00000521941	PARP4	Q9UKK3	1724 aa	Known RBP	11.52	□□□□□ -0.56
CTNNA1-231	ENST00000521941	AMPH	P49418	695 aa		11.52	□□□□□ -0.57
CTNNA1-231	ENST00000521941	ANKRD24	Q8TF21	1146 aa		11.52	□□□□□ -0.57
CTNNA1-231	ENST00000521941	PEAK1	Q9H792	1746 aa		11.52	□□□□□ -0.57
CTNNA1-231	ENST00000521941	RGPD2	P0DJD1	1756 aa		11.51	□□□□□ -0.57
CTNNA1-231	ENST00000521941	ONECUT3	O60422	494 aa	Predicted RBP	11.51	□□□□□ -0.57
CTNNA1-231	ENST00000521941	NLRP2	Q9NX02	1062 aa		11.51	□□□□□ -0.57
CTNNA1-231	ENST00000521941	FAM208A	Q9UK61	1670 aa	Known RBP	11.51	□□□□□ -0.57
CTNNA1-231	ENST00000521941	ERBB3	P21860	1342 aa		11.51	□□□□□ -0.57
CTNNA1-231	ENST00000521941	BLM	P54132	1417 aa	Predicted RBP	11.51	□□□□□ -0.57
CTNNA1-231	ENST00000521941	EP400	Q96L91	3159 aa		11.51	□□□□□ -0.57
CTNNA1-231	ENST00000521941	HOXC9	P31274	260 aa		11.5	□□□□□ -0.57
CTNNA1-231	ENST00000521941	TNNT2	P45379	298 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNNA1-231	ENST00000521941	BARGIN	Q6ZT62	677 aa		11.5	□□□□□ -0.57
CTNNA1-231	ENST00000521941	THRAP3	Q9Y2W1	955 aa	Known RBP	11.5	□□□□□ -0.57
CTNNA1-231	ENST00000521941	CCDC7	Q96M83	1385 aa		11.5	□□□□□ -0.57
CTNNA1-231	ENST00000521941	MAP2	P11137	1827 aa	Known RBP	11.49	□□□□□ -0.57
CTNNA1-231	ENST00000521941	PPM1G	O15355	546 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNNA1-231	ENST00000521941	PDE3B	Q13370	1112 aa		11.49	□□□□□ -0.57
CTNNA1-231	ENST00000521941	CNGB1	Q14028	1251 aa	Predicted RBP	11.49	□□□□□ -0.57
CTNNA1-231	ENST00000521941	IP6K1	Q92551	441 aa		11.49	□□□□□ -0.57
CTNNA1-231	ENST00000521941	RTL1	A6NKG5	1358 aa		11.49	□□□□□ -0.57
CTNNA1-231	ENST00000521941	CARD10	Q9BWT7	1032 aa		11.48	□□□□□ -0.57
CTNNA1-231	ENST00000521941	EMILIN1	Q9Y6C2	1016 aa		11.48	□□□□□ -0.57
CTNNA1-231	ENST00000521941	WASHC2A	Q641Q2	1341 aa		11.48	□□□□□ -0.57
CTNNA1-231	ENST00000521941	RGPD1	P0DJD0	1748 aa		11.48	□□□□□ -0.57
CTNNA1-231	ENST00000521941	SMG6	Q86US8	1419 aa	Known RBP	11.47	□□□□□ -0.57
CTNNA1-231	ENST00000521941	SF3B2	Q13435	895 aa	Known RBP	11.47	□□□□□ -0.57
CTNNA1-231	ENST00000521941	DDB1	Q16531	1140 aa		11.47	□□□□□ -0.57
CTNNA1-231	ENST00000521941	KNSTRN	Q9Y448	316 aa		11.47	□□□□□ -0.57
CTNNA1-231	ENST00000521941	TNS1	Q9HBL0	1735 aa	Known RBP	11.46	□□□□□ -0.57
CTNNA1-231	ENST00000521941	DISP2	A7MBM2	1401 aa		11.46	□□□□□ -0.57
CTNNA1-231	ENST00000521941	FLT4	P35916	1363 aa		11.46	□□□□□ -0.57
CTNNA1-231	ENST00000521941	USHBP1	Q8N6Y0	703 aa		11.46	□□□□□ -0.57
CTNNA1-231	ENST00000521941	TNS2	Q63HR2	1409 aa		11.45	□□□□□ -0.58
CTNNA1-231	ENST00000521941	NSD2	O96028	1365 aa		11.45	□□□□□ -0.58
CTNNA1-231	ENST00000521941	HSP90AB2P	Q58FF8	381 aa		11.45	□□□□□ -0.58
CTNNA1-231	ENST00000521941	DEFB132	Q7Z7B7	95 aa		11.45	□□□□□ -0.58
CTNNA1-231	ENST00000521941	OVOS2	A0A0G2JMS6	1433 aa		11.44	□□□□□ -0.58
CTNNA1-231	ENST00000521941	TRIM37	O94972	964 aa		11.44	□□□□□ -0.58
CTNNA1-231	ENST00000521941	CC2D1B	Q5T0F9	858 aa	Known RBP	11.44	□□□□□ -0.58
CTNNA1-231	ENST00000521941	MORC1	Q86VD1	984 aa		11.44	□□□□□ -0.58
CTNNA1-231	ENST00000521941	INSR	P06213	1382 aa		11.43	□□□□□ -0.58
CTNNA1-231	ENST00000521941	IL2RB	P14784	551 aa		11.43	□□□□□ -0.58
CTNNA1-231	ENST00000521941	FAM196A	Q6ZSG2	479 aa		11.43	□□□□□ -0.58
CTNNA1-231	ENST00000521941	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.43	□□□□□ -0.58
CTNNA1-231	ENST00000521941	SBF2	Q86WG5	1849 aa		11.42	□□□□□ -0.58
CTNNA1-231	ENST00000521941	MEGF6	O75095	1541 aa		11.42	□□□□□ -0.58
CTNNA1-231	ENST00000521941	EXOC5	O00471	708 aa		11.42	□□□□□ -0.58
CTNNA1-231	ENST00000521941	BAG6	P46379	1132 aa		11.42	□□□□□ -0.58
CTNNA1-231	ENST00000521941	CCDC125	Q86Z20	511 aa		11.42	□□□□□ -0.58
CTNNA1-231	ENST00000521941	POLK	Q9UBT6	870 aa		11.42	□□□□□ -0.58
CTNNA1-231	ENST00000521941	KIF24	Q5T7B8	1368 aa		11.41	□□□□□ -0.58
CTNNA1-231	ENST00000521941	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNNA1-231	ENST00000521941	NBPF6	Q5VWK0	638 aa		11.41	□□□□□ -0.58
CTNNA1-231	ENST00000521941	MARCH10	Q8NA82	808 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNNA1-231	ENST00000521941	NBPF4	Q96M43	638 aa		11.41	□□□□□ -0.58
CTNNA1-231	ENST00000521941	SHANK3	Q9BYB0	1731 aa		11.4	□□□□□ -0.58
CTNNA1-231	ENST00000521941	EN1	Q05925	392 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNNA1-231	ENST00000521941	KAT6B	Q8WYB5	2073 aa		11.4	□□□□□ -0.58
CTNNA1-231	ENST00000521941	DOT1L	Q8TEK3	1739 aa		11.38	□□□□□ -0.59
CTNNA1-231	ENST00000521941	PER1	O15534	1290 aa	Predicted RBP	11.38	□□□□□ -0.59
CTNNA1-231	ENST00000521941	APBA3	O96018	575 aa		11.38	□□□□□ -0.59
CTNNA1-231	ENST00000521941	EIF4A2	Q14240	407 aa	Known RBP	11.38	□□□□□ -0.59
CTNNA1-231	ENST00000521941	DDX54	Q8TDD1	881 aa	Known RBP	11.38	□□□□□ -0.59
CTNNA1-231	ENST00000521941	RAPGEF4	Q8WZA2	1011 aa		11.38	□□□□□ -0.59
CTNNA1-231	ENST00000521941	ACSBG1	Q96GR2	724 aa		11.38	□□□□□ -0.59
CTNNA1-231	ENST00000521941	NHS	Q6T4R5	1651 aa		11.37	□□□□□ -0.59
CTNNA1-231	ENST00000521941	TAT	P17735	454 aa	Predicted RBP	11.37	□□□□□ -0.59
CTNNA1-231	ENST00000521941	EZH2	Q15910	746 aa	Known RBP	11.36	□□□□□ -0.59
CTNNA1-231	ENST00000521941	PTF1A	Q7RTS3	328 aa		11.36	□□□□□ -0.59

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