RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 FANCAO15360 1455 aa11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 MROH1Q8NDA8 1641 aa11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 SHPRHQ149N8 1683 aa11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 DHX37Q8IY37 1157 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 TMEM57Q8N5G2 664 aa11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-230ENST00000521724 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 SSH1Q8WYL5 1049 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 NOS1P29475 1434 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 NSD3Q9BZ95 1437 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 MROH2AA6NES4 1674 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 ANKRD45Q5TZF3 282 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 LRSAM1Q6UWE0 723 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 MYRIPQ8NFW9 859 aa11.81□□□□□ -0.52
CTNNA1-230ENST00000521724 SYCE3A1L190 88 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 CBX1P83916 185 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 MTHFSP49914 203 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 PKP1Q13835 747 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 GPT2Q8TD30 523 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 RNF214Q8ND24 703 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-230ENST00000521724 INO80Q9ULG1 1556 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 KIF20AO95235 890 aa11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 CYP2E1P05181 493 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 JARID2Q92833 1246 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 TMEM63CQ9P1W3 806 aa11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 ADGRL1O94910 1474 aa11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 MYOM2P54296 1465 aa11.79□□□□□ -0.52
CTNNA1-230ENST00000521724 U2AF1L5P0DN76 240 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 HMGN5P82970 282 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 U2AF1Q01081 240 aaKnown RBP eCLIP11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 RABEP1Q15276 862 aa11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 CFAP74Q9C0B2 1584 aa11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 IPO8O15397 1037 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 TSC1Q92574 1164 aa11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 PRIMPOLQ96LW4 560 aa11.78□□□□□ -0.52
CTNNA1-230ENST00000521724 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.52
CTNNA1-230ENST00000521724 PPP4R3BQ5MIZ7 849 aa11.77□□□□□ -0.52
CTNNA1-230ENST00000521724 GGT6Q6P531 493 aa11.77□□□□□ -0.52
CTNNA1-230ENST00000521724 ASXL2Q76L83 1435 aa11.77□□□□□ -0.52
CTNNA1-230ENST00000521724 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.52
CTNNA1-230ENST00000521724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.77□□□□□ -0.522e-7■■□□□ 14.5
CTNNA1-230ENST00000521724 KIF1BO60333 1816 aa11.77□□□□□ -0.53
CTNNA1-230ENST00000521724 C14orf93Q9H972 538 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-230ENST00000521724 PPRC1Q5VV67 1664 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-230ENST00000521724 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.53
CTNNA1-230ENST00000521724 CDC45O75419 566 aa11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 LETM1O95202 739 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 GCC1Q96CN9 775 aa11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 ARAP3Q8WWN8 1544 aa11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 ABCA9Q8IUA7 1624 aa11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 SAFB2Q14151 953 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTNNA1-230ENST00000521724 RGL2O15211 777 aa11.75□□□□□ -0.53
CTNNA1-230ENST00000521724 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
CTNNA1-230ENST00000521724 KIF3AQ9Y496 699 aa11.75□□□□□ -0.53
CTNNA1-230ENST00000521724 SBNO2Q9Y2G9 1366 aa11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 NSFL1CQ9UNZ2 370 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 KIDINS220Q9ULH0 1771 aa11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 GTF2F1P35269 517 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 ATP2B3Q16720 1220 aa11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 ZNF518AQ6AHZ1 1483 aa11.74□□□□□ -0.53
CTNNA1-230ENST00000521724 MBD3O95983 291 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 PDE4CQ08493 712 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 NOLC1Q14978 699 aaKnown RBP eCLIP11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 NPATQ14207 1427 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 ABCC11Q96J66 1382 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 ST18O60284 1047 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 MPNDQ8N594 471 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 PIBF1Q8WXW3 757 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 ZNF428Q96B54 188 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 TSPY26PQ9H489 355 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 MYO3AQ8NEV4 1616 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 ZDHHC9Q9Y397 364 aa11.73□□□□□ -0.53
CTNNA1-230ENST00000521724 ZNF830Q96NB3 372 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-230ENST00000521724 ADGRB1O14514 1584 aa11.72□□□□□ -0.53
CTNNA1-230ENST00000521724 PPIP5K1Q6PFW1 1433 aa11.72□□□□□ -0.53
CTNNA1-230ENST00000521724 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
CTNNA1-230ENST00000521724 ADGRB3O60242 1522 aa11.71□□□□□ -0.53
CTNNA1-230ENST00000521724 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.54
CTNNA1-230ENST00000521724 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.54
CTNNA1-230ENST00000521724 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.54
CTNNA1-230ENST00000521724 USP26Q9BXU7 913 aa11.71□□□□□ -0.54
CTNNA1-230ENST00000521724 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.54
CTNNA1-230ENST00000521724 QRICH2Q9H0J4 1663 aa11.7□□□□□ -0.54
CTNNA1-230ENST00000521724 RAPGEF3O95398 923 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms