RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
MRPS28-208ENST00000521605 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
MRPS28-208ENST00000521605 SLC15A2Q16348 729 aa15.39■□□□□ 0.05
MRPS28-208ENST00000521605 GPR162Q16538 588 aa15.39■□□□□ 0.05
MRPS28-208ENST00000521605 MTFR1LQ9H019 292 aa15.39■□□□□ 0.05
MRPS28-208ENST00000521605 CRB1P82279 1406 aa15.39■□□□□ 0.05
MRPS28-208ENST00000521605 CPDO75976 1380 aa15.38■□□□□ 0.05
MRPS28-208ENST00000521605 TXNRD1Q16881 649 aa15.38■□□□□ 0.05
MRPS28-208ENST00000521605 SIN3AQ96ST3 1273 aa15.38■□□□□ 0.05
MRPS28-208ENST00000521605 ACEP12821 1306 aa15.38■□□□□ 0.05
MRPS28-208ENST00000521605 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
MRPS28-208ENST00000521605 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
MRPS28-208ENST00000521605 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
MRPS28-208ENST00000521605 ARXQ96QS3 562 aa15.37■□□□□ 0.05
MRPS28-208ENST00000521605 SGIP1Q9BQI5 828 aa15.36■□□□□ 0.05
MRPS28-208ENST00000521605 TOM1L2Q6ZVM7 507 aa15.35■□□□□ 0.05
MRPS28-208ENST00000521605 MARCH10Q8NA82 808 aaPredicted RBP15.35■□□□□ 0.05
MRPS28-208ENST00000521605 USP19O94966 1318 aa15.35■□□□□ 0.05
MRPS28-208ENST00000521605 GCP02774 474 aa15.34■□□□□ 0.05
MRPS28-208ENST00000521605 CDK19Q9BWU1 502 aa15.34■□□□□ 0.05
MRPS28-208ENST00000521605 KDM2AQ9Y2K7 1162 aa15.34■□□□□ 0.05
MRPS28-208ENST00000521605 POLR3AO14802 1390 aaPredicted RBP15.34■□□□□ 0.05
MRPS28-208ENST00000521605 NLRP13Q86W25 1043 aa15.33■□□□□ 0.04
MRPS28-208ENST00000521605 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
MRPS28-208ENST00000521605 GOLGB1Q14789 3259 aaKnown RBP15.32■□□□□ 0.04
MRPS28-208ENST00000521605 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
MRPS28-208ENST00000521605 NEUROD1Q13562 356 aa15.32■□□□□ 0.04
MRPS28-208ENST00000521605 ARHGEF28Q8N1W1 1705 aaKnown RBP15.31■□□□□ 0.04
MRPS28-208ENST00000521605 SHANK3Q9BYB0 1731 aa15.31■□□□□ 0.04
MRPS28-208ENST00000521605 WNK3Q9BYP7 1800 aa15.31■□□□□ 0.04
MRPS28-208ENST00000521605 MAP3K5Q99683 1374 aa15.3■□□□□ 0.04
MRPS28-208ENST00000521605 CCDC61Q9Y6R9 512 aa15.3■□□□□ 0.04
MRPS28-208ENST00000521605 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
MRPS28-208ENST00000521605 AATKQ6ZMQ8 1374 aa15.27■□□□□ 0.04
MRPS28-208ENST00000521605 PLEKHG3A1L390 1219 aa15.27■□□□□ 0.04
MRPS28-208ENST00000521605 DCAF11Q8TEB1 546 aa15.27■□□□□ 0.04
MRPS28-208ENST00000521605 BCL9O00512 1426 aa15.26■□□□□ 0.03
MRPS28-208ENST00000521605 WDR17Q8IZU2 1322 aa15.26■□□□□ 0.03
MRPS28-208ENST00000521605 NLRP6P59044 892 aa15.26■□□□□ 0.03
MRPS28-208ENST00000521605 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
MRPS28-208ENST00000521605 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
MRPS28-208ENST00000521605 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
MRPS28-208ENST00000521605 EXOC5O00471 708 aa15.25■□□□□ 0.03
MRPS28-208ENST00000521605 CSB-PGBD3P0DP91 1061 aa15.25■□□□□ 0.03
MRPS28-208ENST00000521605 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
MRPS28-208ENST00000521605 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
MRPS28-208ENST00000521605 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
MRPS28-208ENST00000521605 NLGN2Q8NFZ4 835 aa15.24■□□□□ 0.03
MRPS28-208ENST00000521605 SOX12O15370 315 aa15.23■□□□□ 0.03
MRPS28-208ENST00000521605 POLD1P28340 1107 aa15.23■□□□□ 0.03
MRPS28-208ENST00000521605 SRPK2P78362 688 aaKnown RBP15.23■□□□□ 0.03
MRPS28-208ENST00000521605 SLIT3O75094 1523 aa15.22■□□□□ 0.03
MRPS28-208ENST00000521605 NHSQ6T4R5 1651 aa15.22■□□□□ 0.03
MRPS28-208ENST00000521605 COL18A1P39060 1754 aa15.22■□□□□ 0.03
MRPS28-208ENST00000521605 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
MRPS28-208ENST00000521605 ATP10DQ9P241 1426 aa15.21■□□□□ 0.03
MRPS28-208ENST00000521605 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
MRPS28-208ENST00000521605 RGPD5Q99666 1765 aa15.21■□□□□ 0.02
MRPS28-208ENST00000521605 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.02
MRPS28-208ENST00000521605 ZNF526Q8TF50 670 aaPredicted RBP15.2■□□□□ 0.02
MRPS28-208ENST00000521605 CARD10Q9BWT7 1032 aa15.2■□□□□ 0.02
MRPS28-208ENST00000521605 CABP2Q9NPB3 220 aa15.2■□□□□ 0.02
MRPS28-208ENST00000521605 CPSF1Q10570 1443 aaKnown RBP15.19■□□□□ 0.02
MRPS28-208ENST00000521605 TNS2Q63HR2 1409 aa15.19■□□□□ 0.02
MRPS28-208ENST00000521605 HSPA6P17066 643 aa15.19■□□□□ 0.02
MRPS28-208ENST00000521605 GPBP1L1Q9HC44 474 aaPredicted RBP15.19■□□□□ 0.02
MRPS28-208ENST00000521605 LRRC4BQ9NT99 713 aa15.19■□□□□ 0.02
MRPS28-208ENST00000521605 BRD4O60885 1362 aaPredicted RBP15.19■□□□□ 0.02
MRPS28-208ENST00000521605 BTAF1O14981 1849 aa15.18■□□□□ 0.02
MRPS28-208ENST00000521605 STAC3Q96MF2 364 aa15.18■□□□□ 0.02
MRPS28-208ENST00000521605 USP6P35125 1406 aa15.17■□□□□ 0.02
MRPS28-208ENST00000521605 PIK3C2AO00443 1686 aa15.17■□□□□ 0.02
MRPS28-208ENST00000521605 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
MRPS28-208ENST00000521605 SLC16A10Q8TF71 515 aa15.16■□□□□ 0.02
MRPS28-208ENST00000521605 CABP1Q9NZU7 370 aa15.16■□□□□ 0.02
MRPS28-208ENST00000521605 PNPLA7Q6ZV29 1317 aa15.16■□□□□ 0.02
MRPS28-208ENST00000521605 CCDC7Q96M83 1385 aa15.15■□□□□ 0.02
MRPS28-208ENST00000521605 ARHGEF25Q86VW2 580 aa15.15■□□□□ 0.02
MRPS28-208ENST00000521605 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
MRPS28-208ENST00000521605 TFCP2L1Q9NZI6 479 aa15.15■□□□□ 0.02
MRPS28-208ENST00000521605 TRPM1Q7Z4N2 1603 aa15.14■□□□□ 0.01
MRPS28-208ENST00000521605 ABCC6O95255 1503 aa15.14■□□□□ 0.01
MRPS28-208ENST00000521605 KCNQ4P56696 695 aa15.14■□□□□ 0.01
MRPS28-208ENST00000521605 COL24A1Q17RW2 1714 aa15.12■□□□□ 0.01
MRPS28-208ENST00000521605 KCNH5Q8NCM2 988 aa15.12■□□□□ 0.01
MRPS28-208ENST00000521605 TUBGCP6Q96RT7 1819 aa15.12■□□□□ 0.01
MRPS28-208ENST00000521605 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
MRPS28-208ENST00000521605 QSER1Q2KHR3 1735 aa15.12■□□□□ 0.01
MRPS28-208ENST00000521605 NLRP2Q9NX02 1062 aa15.11■□□□□ 0.01
MRPS28-208ENST00000521605 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
MRPS28-208ENST00000521605 EIF4G2P78344 907 aaKnown RBP eCLIP15.1■□□□□ 0.01
MRPS28-208ENST00000521605 CENPJQ9HC77 1338 aaPredicted RBP15.1■□□□□ 0.01
MRPS28-208ENST00000521605 IL2RBP14784 551 aa15.09■□□□□ 0.01
MRPS28-208ENST00000521605 NBPF1Q3BBV0 1214 aa15.09■□□□□ 0.01
MRPS28-208ENST00000521605 MSL1Q68DK7 614 aa15.09■□□□□ 0.01
MRPS28-208ENST00000521605 CAPN15O75808 1086 aa15.08■□□□□ 0
MRPS28-208ENST00000521605 SLC27A3Q5K4L6 730 aa15.08■□□□□ 0
MRPS28-208ENST00000521605 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
MRPS28-208ENST00000521605 WWC3Q9ULE0 1092 aa15.08■□□□□ 0
MRPS28-208ENST00000521605 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms