RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 CRB1P82279 1406 aa11.66□□□□□ -0.54
HMBOX1-208ENST00000521516 KLRG1Q96E93 195 aa11.66□□□□□ -0.54
HMBOX1-208ENST00000521516 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.54
HMBOX1-208ENST00000521516 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.54
HMBOX1-208ENST00000521516 ZNF827Q17R98 1081 aa11.64□□□□□ -0.55
HMBOX1-208ENST00000521516 PRAM1Q96QH2 718 aa11.64□□□□□ -0.55
HMBOX1-208ENST00000521516 EIF3AQ14152 1382 aaKnown RBP11.64□□□□□ -0.55
HMBOX1-208ENST00000521516 TULP4Q9NRJ4 1543 aa11.64□□□□□ -0.55
HMBOX1-208ENST00000521516 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
HMBOX1-208ENST00000521516 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
HMBOX1-208ENST00000521516 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
HMBOX1-208ENST00000521516 PCNTO95613 3336 aa11.63□□□□□ -0.55
HMBOX1-208ENST00000521516 SAFB2Q14151 953 aaKnown RBP eCLIP11.62□□□□□ -0.55
HMBOX1-208ENST00000521516 TOMM70O94826 608 aa11.62□□□□□ -0.55
HMBOX1-208ENST00000521516 WWC3Q9ULE0 1092 aa11.62□□□□□ -0.55
HMBOX1-208ENST00000521516 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
HMBOX1-208ENST00000521516 C14orf93Q9H972 538 aaKnown RBP11.61□□□□□ -0.55
HMBOX1-208ENST00000521516 SPATA31E1Q6ZUB1 1445 aa11.61□□□□□ -0.55
HMBOX1-208ENST00000521516 AKAP12Q02952 1782 aa11.61□□□□□ -0.55
HMBOX1-208ENST00000521516 USP19O94966 1318 aa11.61□□□□□ -0.55
HMBOX1-208ENST00000521516 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
HMBOX1-208ENST00000521516 WNK3Q9BYP7 1800 aa11.6□□□□□ -0.55
HMBOX1-208ENST00000521516 NUTM2GQ5VZR2 741 aa11.59□□□□□ -0.55
HMBOX1-208ENST00000521516 NHSQ6T4R5 1651 aa11.59□□□□□ -0.55
HMBOX1-208ENST00000521516 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
HMBOX1-208ENST00000521516 ARHGEF28Q8N1W1 1705 aaKnown RBP11.58□□□□□ -0.56
HMBOX1-208ENST00000521516 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
HMBOX1-208ENST00000521516 POGKQ9P215 609 aa11.58□□□□□ -0.56
HMBOX1-208ENST00000521516 BRD4O60885 1362 aaPredicted RBP11.57□□□□□ -0.56
HMBOX1-208ENST00000521516 WASLO00401 505 aaPredicted RBP11.57□□□□□ -0.56
HMBOX1-208ENST00000521516 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
HMBOX1-208ENST00000521516 GCP02774 474 aa11.55□□□□□ -0.56
HMBOX1-208ENST00000521516 HTRA3P83110 453 aa11.55□□□□□ -0.56
HMBOX1-208ENST00000521516 RGL3Q3MIN7 710 aa11.55□□□□□ -0.56
HMBOX1-208ENST00000521516 CD2APQ9Y5K6 639 aa11.55□□□□□ -0.56
HMBOX1-208ENST00000521516 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
HMBOX1-208ENST00000521516 CFAP70Q5T0N1 1121 aa11.54□□□□□ -0.56
HMBOX1-208ENST00000521516 TOM1L2Q6ZVM7 507 aa11.54□□□□□ -0.56
HMBOX1-208ENST00000521516 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
HMBOX1-208ENST00000521516 ITSN1Q15811 1721 aa11.54□□□□□ -0.56
HMBOX1-208ENST00000521516 WDR17Q8IZU2 1322 aa11.53□□□□□ -0.56
HMBOX1-208ENST00000521516 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
HMBOX1-208ENST00000521516 TUBGCP6Q96RT7 1819 aa11.53□□□□□ -0.56
HMBOX1-208ENST00000521516 ABTB2Q8N961 1025 aa11.52□□□□□ -0.56
HMBOX1-208ENST00000521516 USP6P35125 1406 aa11.52□□□□□ -0.57
HMBOX1-208ENST00000521516 EXOC5O00471 708 aa11.52□□□□□ -0.57
HMBOX1-208ENST00000521516 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
HMBOX1-208ENST00000521516 BTAF1O14981 1849 aa11.52□□□□□ -0.57
HMBOX1-208ENST00000521516 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
HMBOX1-208ENST00000521516 CICQ96RK0 1608 aaPredicted RBP11.51□□□□□ -0.57
HMBOX1-208ENST00000521516 HSPA1AP0DMV8 641 aaKnown RBP11.51□□□□□ -0.57
HMBOX1-208ENST00000521516 HSPA1BP0DMV9 641 aaKnown RBP11.51□□□□□ -0.57
HMBOX1-208ENST00000521516 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
HMBOX1-208ENST00000521516 COL18A1P39060 1754 aa11.51□□□□□ -0.57
HMBOX1-208ENST00000521516 FSTL1Q12841 308 aa11.51□□□□□ -0.57
HMBOX1-208ENST00000521516 NLRP13Q86W25 1043 aa11.51□□□□□ -0.57
HMBOX1-208ENST00000521516 ITGAEP38570 1179 aa11.5□□□□□ -0.57
HMBOX1-208ENST00000521516 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
HMBOX1-208ENST00000521516 TFCP2L1Q9NZI6 479 aa11.5□□□□□ -0.57
HMBOX1-208ENST00000521516 ADGRB1O14514 1584 aa11.5□□□□□ -0.57
HMBOX1-208ENST00000521516 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
HMBOX1-208ENST00000521516 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
HMBOX1-208ENST00000521516 ACEP12821 1306 aa11.49□□□□□ -0.57
HMBOX1-208ENST00000521516 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
HMBOX1-208ENST00000521516 ABCC6O95255 1503 aa11.49□□□□□ -0.57
HMBOX1-208ENST00000521516 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
HMBOX1-208ENST00000521516 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
HMBOX1-208ENST00000521516 AXIN2Q9Y2T1 843 aa11.48□□□□□ -0.57
HMBOX1-208ENST00000521516 SLIT3O75094 1523 aa11.47□□□□□ -0.57
HMBOX1-208ENST00000521516 TRAK1Q9UPV9 953 aa11.46□□□□□ -0.57
HMBOX1-208ENST00000521516 CCDC7Q96M83 1385 aa11.46□□□□□ -0.58
HMBOX1-208ENST00000521516 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
HMBOX1-208ENST00000521516 COL23A1Q86Y22 540 aaPredicted RBP11.45□□□□□ -0.58
HMBOX1-208ENST00000521516 IGSF1Q8N6C5 1336 aa11.45□□□□□ -0.58
HMBOX1-208ENST00000521516 PPIP5K1Q6PFW1 1433 aa11.44□□□□□ -0.58
HMBOX1-208ENST00000521516 C10orf71Q711Q0 1435 aa11.44□□□□□ -0.58
HMBOX1-208ENST00000521516 ZBTB7CA1YPR0 619 aa11.44□□□□□ -0.58
HMBOX1-208ENST00000521516 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
HMBOX1-208ENST00000521516 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
HMBOX1-208ENST00000521516 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
HMBOX1-208ENST00000521516 CPSF1Q10570 1443 aaKnown RBP11.43□□□□□ -0.58
HMBOX1-208ENST00000521516 C16orf71Q8IYS4 520 aaPredicted RBP11.42□□□□□ -0.58
HMBOX1-208ENST00000521516 KCNQ4P56696 695 aa11.41□□□□□ -0.58
HMBOX1-208ENST00000521516 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
HMBOX1-208ENST00000521516 CDK19Q9BWU1 502 aa11.41□□□□□ -0.58
HMBOX1-208ENST00000521516 MSH5O43196 834 aa11.4□□□□□ -0.58
HMBOX1-208ENST00000521516 LY75O60449 1722 aa11.4□□□□□ -0.58
HMBOX1-208ENST00000521516 PIK3C2AO00443 1686 aa11.4□□□□□ -0.58
HMBOX1-208ENST00000521516 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
HMBOX1-208ENST00000521516 PRDM10Q9NQV6 1147 aa11.39□□□□□ -0.59
HMBOX1-208ENST00000521516 NLRP6P59044 892 aa11.39□□□□□ -0.59
HMBOX1-208ENST00000521516 RGPD5Q99666 1765 aa11.38□□□□□ -0.59
HMBOX1-208ENST00000521516 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
HMBOX1-208ENST00000521516 PXDNLA1KZ92 1463 aa11.37□□□□□ -0.59
HMBOX1-208ENST00000521516 PLEKHG2Q9H7P9 1386 aa11.37□□□□□ -0.59
HMBOX1-208ENST00000521516 KIAA1210Q9ULL0 1709 aa11.36□□□□□ -0.59
HMBOX1-208ENST00000521516 RGS19P49795 217 aa11.36□□□□□ -0.59
HMBOX1-208ENST00000521516 NSD2O96028 1365 aa11.36□□□□□ -0.59
HMBOX1-208ENST00000521516 QRICH2Q9H0J4 1663 aa11.36□□□□□ -0.59
HMBOX1-208ENST00000521516 IL2RBP14784 551 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms