RNA–Protein interactions for RNA: ENST00000521438.1

NDRG1-218, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-218ENST00000521438 RRP1P56182 461 aaKnown RBP13.23□□□□□ -0.29
NDRG1-218ENST00000521438 PIK3C2AO00443 1686 aa13.23□□□□□ -0.29
NDRG1-218ENST00000521438 TNNQ9UQP3 1299 aa13.22□□□□□ -0.29
NDRG1-218ENST00000521438 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
NDRG1-218ENST00000521438 NRKQ7Z2Y5 1582 aa13.22□□□□□ -0.29
NDRG1-218ENST00000521438 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
NDRG1-218ENST00000521438 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
NDRG1-218ENST00000521438 PEAK1Q9H792 1746 aa13.22□□□□□ -0.29
NDRG1-218ENST00000521438 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
NDRG1-218ENST00000521438 LRRC7Q96NW7 1537 aa13.21□□□□□ -0.29
NDRG1-218ENST00000521438 FRAT1Q92837 279 aaPredicted RBP13.21□□□□□ -0.29
NDRG1-218ENST00000521438 SKAP1Q86WV1 359 aa13.2□□□□□ -0.3
NDRG1-218ENST00000521438 TTC21AQ8NDW8 1320 aa13.2□□□□□ -0.3
NDRG1-218ENST00000521438 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
NDRG1-218ENST00000521438 MCM10Q7L590 875 aa13.2□□□□□ -0.3
NDRG1-218ENST00000521438 EYA1Q99502 592 aa13.2□□□□□ -0.3
NDRG1-218ENST00000521438 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
NDRG1-218ENST00000521438 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
NDRG1-218ENST00000521438 ANKARQ7Z5J8 1434 aa13.19□□□□□ -0.3
NDRG1-218ENST00000521438 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
NDRG1-218ENST00000521438 FCHSD2O94868 740 aa13.18□□□□□ -0.3
NDRG1-218ENST00000521438 HOXC9P31274 260 aa13.18□□□□□ -0.3
NDRG1-218ENST00000521438 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
NDRG1-218ENST00000521438 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
NDRG1-218ENST00000521438 IQSEC2Q5JU85 1478 aa13.18□□□□□ -0.3
NDRG1-218ENST00000521438 E9PSI1 815 aa13.18□□□□□ -0.3
NDRG1-218ENST00000521438 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
NDRG1-218ENST00000521438 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
NDRG1-218ENST00000521438 NEFMP07197 916 aa13.17□□□□□ -0.3
NDRG1-218ENST00000521438 GCP02774 474 aa13.17□□□□□ -0.3
NDRG1-218ENST00000521438 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
NDRG1-218ENST00000521438 AXIN2Q9Y2T1 843 aa13.17□□□□□ -0.3
NDRG1-218ENST00000521438 PPP4R2Q9NY27 417 aa13.17□□□□□ -0.3
NDRG1-218ENST00000521438 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
NDRG1-218ENST00000521438 MSH6P52701 1360 aa13.16□□□□□ -0.3
NDRG1-218ENST00000521438 TRMT2AQ8IZ69 625 aaKnown RBP13.16□□□□□ -0.3
NDRG1-218ENST00000521438 USP31Q70CQ4 1352 aa13.15□□□□□ -0.3
NDRG1-218ENST00000521438 MST1RQ04912 1400 aa13.15□□□□□ -0.3
NDRG1-218ENST00000521438 FANCIQ9NVI1 1328 aa13.15□□□□□ -0.3
NDRG1-218ENST00000521438 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
NDRG1-218ENST00000521438 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
NDRG1-218ENST00000521438 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
NDRG1-218ENST00000521438 PANK1Q8TE04 598 aa13.15□□□□□ -0.3
NDRG1-218ENST00000521438 INSRP06213 1382 aa13.15□□□□□ -0.31
NDRG1-218ENST00000521438 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
NDRG1-218ENST00000521438 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
NDRG1-218ENST00000521438 SLAIN2Q9P270 581 aa13.14□□□□□ -0.31
NDRG1-218ENST00000521438 NWD1Q149M9 1564 aa13.14□□□□□ -0.31
NDRG1-218ENST00000521438 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
NDRG1-218ENST00000521438 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
NDRG1-218ENST00000521438 CCDC136Q96JN2 1154 aa13.14□□□□□ -0.31
NDRG1-218ENST00000521438 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
NDRG1-218ENST00000521438 RNF123Q5XPI4 1314 aa13.14□□□□□ -0.31
NDRG1-218ENST00000521438 MSH5O43196 834 aa13.13□□□□□ -0.31
NDRG1-218ENST00000521438 TSPYL6Q8N831 410 aa13.13□□□□□ -0.31
NDRG1-218ENST00000521438 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
NDRG1-218ENST00000521438 FLT4P35916 1363 aa13.13□□□□□ -0.31
NDRG1-218ENST00000521438 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
NDRG1-218ENST00000521438 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
NDRG1-218ENST00000521438 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
NDRG1-218ENST00000521438 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
NDRG1-218ENST00000521438 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
NDRG1-218ENST00000521438 RARSP54136 660 aaKnown RBP13.1□□□□□ -0.31
NDRG1-218ENST00000521438 LTN1O94822 1766 aa13.1□□□□□ -0.31
NDRG1-218ENST00000521438 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
NDRG1-218ENST00000521438 RLBP1P12271 317 aa13.09□□□□□ -0.31
NDRG1-218ENST00000521438 HAP1P54257 671 aaPredicted RBP13.09□□□□□ -0.31
NDRG1-218ENST00000521438 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
NDRG1-218ENST00000521438 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
NDRG1-218ENST00000521438 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
NDRG1-218ENST00000521438 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
NDRG1-218ENST00000521438 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.31
NDRG1-218ENST00000521438 IP6K1Q92551 441 aa13.08□□□□□ -0.31
NDRG1-218ENST00000521438 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
NDRG1-218ENST00000521438 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.32
NDRG1-218ENST00000521438 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
NDRG1-218ENST00000521438 SSH1Q8WYL5 1049 aa13.08□□□□□ -0.32
NDRG1-218ENST00000521438 SMC4Q9NTJ3 1288 aa13.08□□□□□ -0.32
NDRG1-218ENST00000521438 NLRP2Q9NX02 1062 aa13.08□□□□□ -0.32
NDRG1-218ENST00000521438 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
NDRG1-218ENST00000521438 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
NDRG1-218ENST00000521438 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
NDRG1-218ENST00000521438 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
NDRG1-218ENST00000521438 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
NDRG1-218ENST00000521438 IGSF1Q8N6C5 1336 aa13.06□□□□□ -0.32
NDRG1-218ENST00000521438 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
NDRG1-218ENST00000521438 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
NDRG1-218ENST00000521438 NFAT5O94916 1531 aa13.05□□□□□ -0.32
NDRG1-218ENST00000521438 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
NDRG1-218ENST00000521438 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
NDRG1-218ENST00000521438 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
NDRG1-218ENST00000521438 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
NDRG1-218ENST00000521438 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
NDRG1-218ENST00000521438 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
NDRG1-218ENST00000521438 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
NDRG1-218ENST00000521438 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
NDRG1-218ENST00000521438 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
NDRG1-218ENST00000521438 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
NDRG1-218ENST00000521438 NGEFQ8N5V2 710 aa13.02□□□□□ -0.33
NDRG1-218ENST00000521438 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms